Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

OQU85762
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:4:64174317:64179304:-1 gene:SORBI_3004G303000 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGCTTCGGCGGCTGTGGCTGTGATCCCGGACGGCCGGCGATGGAGCAATAAAGGCCCG
GGCTCCTCGTCGTCGTCGCCGGTGACGACGGCCATTTTCCTCTTCTTCTTTGTCGTCGTG
GTCGGCGTCCTCGTCTCCGCCCGCTGGATCACCACCACTACTCATCTGTCAATCACCAAT
CTGGATCAGTGGAGCTCAAAGCCGGCTATCCTAACCGCGACGCAGACCACCTCCATCCCG
GCCATCCCCGCCGCACCGCCGCCGCCTCGGCCGACCTACTCCCTCTCCTGCACGGCGCCG
CCGCTTCCCCGTGACCCGACCATCCCCAGCAACATCTCCCAGACCCTCGACCTCGTGCTC
TCCCCCAACGCATCCTCCGCCTCCACCTGCGCCGCCGTTCCCGACCCGCCGCCGCTCCCC
GCCAACTCCAACGCCTCCTCAACGTGCCCCGCCTACTTCCGCTTCATCCACGAGGACCTC
CACCCATGGCGCGCCGCTGGGGGCATCACCCGCGCCATGGTCGACCGCGCGCGCGCCACC
GCCAATTTCCGCCTCGTCGTGATCCGGGGCCGCGCGTACATCGAGCGCATCGCGCCGGCG
TTCCAGACGCGCGACCTCTTCACCATCTGGGGCATCCTGCAGCTGCTCCGGCGCTACCCA
GGCCGCGTCCCTGACCTCGACCTCATGTTCGACTGCGTCGACTGGCCCGTCGTGCACGCC
GACCAGTACGAAGGGGAGAACGCCACGGTATTGCCGCCGCTCTTCAGGTACTGCGGCAAC
AATGAGACGCTAGATGTTGTCTTCCCAGACTGGTCATTCTGGGGCTGGCCTGAGATCAAC
ATAAAACCGTGGGATGCTCTGCAGAAGGAATTGAATCGTGGAAACAAGAGGGTGAAATGG
TTGAATAGAGAACCTTATGCTTACTGGAAAGGGAATCCAGATGTTGCAGTTATAAGGCAG
GAGCTTGTTAAGTGTAACGTCTCCAGTGAGCATGAATGGAATGCAAGGATTTACAAACAG
GATTGGCTAAAGGAGATCAAGGCAGGATACAAACAGTCAAATTTGGCTGGTCAATGCACC
CATAGGTACAAGATTTATATTGAAGGATCAGCATGGGTGCTGATGCCCATGCAACATTAT
TGGCCAATTTGGGACGACAACAAGTGTAGCTCCATAAAGTATGCTGTTGACTGGGGCAAC
TCTCACAAACAGAAGGCACAGAGAATAGGAAAGCAAGGAAGCAACTTTATTCAAAAAGAG
CTCAGCATGGAATATGTATATGATTACATGTTTCACCTCTTAACTGAGTATGCCAAGCTC
CTAAGATTCAAGCCAACAAAACCACCTGAAGCTATTGAGGTCTGTCCGGAATCTTTGGCT
TGCCAAGCTATAGGCCGCGAGAGGAAGTTCATGAAGGACTCCATGGTGAGATCCGCCAGC
GATGCCGGCCCATGTGACCTGCCTCCTCCTTTCAATCCTGAGGAATTCAAAGCGCTGCAG
CGTAGGAGAGAGAAGACAATGAAGCAGATCGAAACATGGATGCAAAAAGCTTCGAGGCCC
GTGGATAAGAAGCCGTGA

Peptide Sequence

PEP ID

OQU85762
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:4:64174317:64179304:-1 gene:SORBI_3004G303000 transcript:OQU85762 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MASAAVAVIPDGRRWSNKGPGSSSSSPVTTAIFLFFFVVVVGVLVSARWITTTTHLSITN
LDQWSSKPAILTATQTTSIPAIPAAPPPPRPTYSLSCTAPPLPRDPTIPSNISQTLDLVL
SPNASSASTCAAVPDPPPLPANSNASSTCPAYFRFIHEDLHPWRAAGGITRAMVDRARAT
ANFRLVVIRGRAYIERIAPAFQTRDLFTIWGILQLLRRYPGRVPDLDLMFDCVDWPVVHA
DQYEGENATVLPPLFRYCGNNETLDVVFPDWSFWGWPEINIKPWDALQKELNRGNKRVKW
LNREPYAYWKGNPDVAVIRQELVKCNVSSEHEWNARIYKQDWLKEIKAGYKQSNLAGQCT
HRYKIYIEGSAWVLMPMQHYWPIWDDNKCSSIKYAVDWGNSHKQKAQRIGKQGSNFIQKE
LSMEYVYDYMFHLLTEYAKLLRFKPTKPPEAIEVCPESLACQAIGRERKFMKDSMVRSAS
DAGPCDLPPPFNPEEFKALQRRREKTMKQIETWMQKASRPVDKKP

Transcript Sequence

Transcript ID

OQU85762
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:4:64174317:64179304:-1 gene:SORBI_3004G303000 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

GAATTGTTGGAGTTGCTCTAATGATATCTTATGTTTTTTAGTGCTACTACTATTGTGCTG
ATTATTTTTTTTAAAGTTTGCTCTAGTAGCAACACATAGGCACACAACTAGTTATTACTG
GCACTAATAAGTTATTATTAGTACTTAATTCCCTCCTAGTAATTTTTAAGTGAAAAACTA
TTATATCATCATCTGCATGCAGAGCCCCCGACACAGCAGCAGCACGTGGACGGTGGACGC
GCCCTCCTGAGTGATCGGCGCGGACCGAACGTCCCCTGGCGACTTCCGGGCTCCTCCTGG
AGGACCGGAGCCTGACGCGCTCGGAGAGAAAGAAGGAACACCTGCTGGTCCCAGATCTCT
CAAAGCGAAGCGCTGGACAAGGGGGCGATGGCTTCGGCGGCTGTGGCTGTGATCCCGGAC
GGCCGGCGATGGAGCAATAAAGGCCCGGGCTCCTCGTCGTCGTCGCCGGTGACGACGGCC
ATTTTCCTCTTCTTCTTTGTCGTCGTGGTCGGCGTCCTCGTCTCCGCCCGCTGGATCACC
ACCACTACTCATCTGTCAATCACCAATCTGGATCAGTGGAGCTCAAAGCCGGCTATCCTA
ACCGCGACGCAGACCACCTCCATCCCGGCCATCCCCGCCGCACCGCCGCCGCCTCGGCCG
ACCTACTCCCTCTCCTGCACGGCGCCGCCGCTTCCCCGTGACCCGACCATCCCCAGCAAC
ATCTCCCAGACCCTCGACCTCGTGCTCTCCCCCAACGCATCCTCCGCCTCCACCTGCGCC
GCCGTTCCCGACCCGCCGCCGCTCCCCGCCAACTCCAACGCCTCCTCAACGTGCCCCGCC
TACTTCCGCTTCATCCACGAGGACCTCCACCCATGGCGCGCCGCTGGGGGCATCACCCGC
GCCATGGTCGACCGCGCGCGCGCCACCGCCAATTTCCGCCTCGTCGTGATCCGGGGCCGC
GCGTACATCGAGCGCATCGCGCCGGCGTTCCAGACGCGCGACCTCTTCACCATCTGGGGC
ATCCTGCAGCTGCTCCGGCGCTACCCAGGCCGCGTCCCTGACCTCGACCTCATGTTCGAC
TGCGTCGACTGGCCCGTCGTGCACGCCGACCAGTACGAAGGGGAGAACGCCACGGTATTG
CCGCCGCTCTTCAGGTACTGCGGCAACAATGAGACGCTAGATGTTGTCTTCCCAGACTGG
TCATTCTGGGGCTGGCCTGAGATCAACATAAAACCGTGGGATGCTCTGCAGAAGGAATTG
AATCGTGGAAACAAGAGGGTGAAATGGTTGAATAGAGAACCTTATGCTTACTGGAAAGGG
AATCCAGATGTTGCAGTTATAAGGCAGGAGCTTGTTAAGTGTAACGTCTCCAGTGAGCAT
GAATGGAATGCAAGGATTTACAAACAGGATTGGCTAAAGGAGATCAAGGCAGGATACAAA
CAGTCAAATTTGGCTGGTCAATGCACCCATAGGTACAAGATTTATATTGAAGGATCAGCA
TGGGTGCTGATGCCCATGCAACATTATTGGCCAATTTGGGACGACAACAAGTGTAGCTCC
ATAAAGTATGCTGTTGACTGGGGCAACTCTCACAAACAGAAGGCACAGAGAATAGGAAAG
CAAGGAAGCAACTTTATTCAAAAAGAGCTCAGCATGGAATATGTATATGATTACATGTTT
CACCTCTTAACTGAGTATGCCAAGCTCCTAAGATTCAAGCCAACAAAACCACCTGAAGCT
ATTGAGGTCTGTCCGGAATCTTTGGCTTGCCAAGCTATAGGCCGCGAGAGGAAGTTCATG
AAGGACTCCATGGTGAGATCCGCCAGCGATGCCGGCCCATGTGACCTGCCTCCTCCTTTC
AATCCTGAGGAATTCAAAGCGCTGCAGCGTAGGAGAGAGAAGACAATGAAGCAGATCGAA
ACATGGATGCAAAAAGCTTCGAGGCCCGTGGATAAGAAGCCGTGAGAGCTTCATGCTTTT
CCCTCCCCAATAGATACACCCATTTTTTTTGTAGTGCTAATAACCACAGGCATTCTTATC
TGATTGAACCAAATGTATGGTTCTACAGAAGTTATAGATGGTTTTAGTTCTCCAGATCTC
ATCAATGTACTTCTATTTGTCGTGTGCCTTATATTTTTTCTATACTCCTGCTTTAGCTGT
AGGATGTAGCGATATTGCTTGACCCTTTAGACTTCAGAGTAAGAGTAAAGAGTGTGTTTG
TTTAGAGGTAGTTGAGGGGAGGGTTAATAGCGCT