Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

OQU85750
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:4:63930522:63933298:1 gene:SORBI_3004G300500 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGAGCATGACCACGGTGCAAGCTGGCCCTCATCAGCCCATGGCAATGGCATGGACGGCG
GGCCCTTCGGCGCTGGGCCCTCCTGCCGGCGCCGGCCTGCCGGACCTCAGCTTCTCGTCG
ATGTCAGGGTCAGAGTCCGAATCCGACTCCTACTCGGACGACTACGACTACGACGACTCT
GATGCCGGGGAGGAGGGCCTCGGCAGGGAGCAGGGCCTCGGCAGGGGCGAGTGCGACAGG
GAGATGATGGCGATCTTCGAGGGGATGATGAAGCAGGTCACGGAGAAGCAGGACGCCATG
CAGCGCGTGTTCCTGGAGACGCTGGAGCGGTGGGAGGCGGAGCGCACGGCGCGCGAGGAG
GCGTGGCGGCGCCAGGAGGTCGCCCGCATGAACCGCGAGCGCGAGCAGCTCGCCAGGGAG
CGCGCCGCCGCGGCCTCCCGCGACGCCGCGCTGATCGCGTTCCTCCAGCGCGTCGGCGGG
GGACAGGGGCAGCCCGTGGCGCGGCTCCCTCCGCACAGCGCCGGCGTCGTGCCCGCGCCG
CCAATTCCGGACCACACCCCTTCGTCGCCTCGTCGCCACGACGCGGCGGCGGCGGCCACC
TATCTTCAGCAGCTGGTGCCCACGTCGCACAAGGCGGTGGAGGCCTTGACGTGGACGGGA
GGCGAGGGCAGCGGGTCCACGTCGTCGTCGCGGTGGCCCAAGGAGGAAGTGGAGGCGCTG
ATCCAGATGCGGAACGAGAAGGACGAGCAGTACCATGACGCGGGGGGCAAAGGCCCGCTT
TGGGAGGACATCGCCGCCGGGATGCGCAGGATCGGGTACAACCGGAGCGCCAAGCGGTGC
AAGGAGAAGTGGGAGAACATCAACAAGTACTACAAGAAGGTGAAGGAGAGCAACAAGAGG
CGCCCCGAGGACTCCAAGACCTGTCCGTACTTCCACCAGCTCGACGCCATGTACAGCAAG
AAACACCGTGCTGGCGGCGGCAGAGGCAGCAGCAGAACCGCACCTGCAGCCAACATGGCC
ACCGCCGTCACCGTCGCCGTCGCCGTCGCCGCTGCCGTGCAGGACAACCCGAGCCAGCGC
GAGCTCGAGGGAAAGAGCAGCAACGATGTCGACCACCGGAAGAATGATGAACTGGGAAAC
GTGCAGGCTTCTCCCGGCAACGGCGATACAGCACCAACGACCACCACCCCGCCTGGCGAC
GGCGCCAAAAACAAGACGGCAGAGGACAATGTGACTGAAACAAATGTGCAGCACCAGCAG
CAACAGCAGCAGGGGTTCAGTGCGGACGAGACGGACAGCGACGACGACATCAACATGGCA
AGAGACTACACAGTCTACACTGAAGAAGGCAACGACGAAGACAAAATGAAGTACAAGATG
GGCGTCCAGAAGCCTGATGTGATCGGGAGCAGCGGCAACGTACCTGCATCACCACCAGCA
CCAGCACCAGCACCGGCAGCACCAGTGACGGCTGCAGCACCGACGAGTTCAGCTGCCCCA
ACGGGCAGCACCTTCCTTGCCGTTCAGTAG

Peptide Sequence

PEP ID

OQU85750
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:4:63930522:63933298:1 gene:SORBI_3004G300500 transcript:OQU85750 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MSMTTVQAGPHQPMAMAWTAGPSALGPPAGAGLPDLSFSSMSGSESESDSYSDDYDYDDS
DAGEEGLGREQGLGRGECDREMMAIFEGMMKQVTEKQDAMQRVFLETLERWEAERTAREE
AWRRQEVARMNREREQLARERAAAASRDAALIAFLQRVGGGQGQPVARLPPHSAGVVPAP
PIPDHTPSSPRRHDAAAAATYLQQLVPTSHKAVEALTWTGGEGSGSTSSSRWPKEEVEAL
IQMRNEKDEQYHDAGGKGPLWEDIAAGMRRIGYNRSAKRCKEKWENINKYYKKVKESNKR
RPEDSKTCPYFHQLDAMYSKKHRAGGGRGSSRTAPAANMATAVTVAVAVAAAVQDNPSQR
ELEGKSSNDVDHRKNDELGNVQASPGNGDTAPTTTTPPGDGAKNKTAEDNVTETNVQHQQ
QQQQGFSADETDSDDDINMARDYTVYTEEGNDEDKMKYKMGVQKPDVIGSSGNVPASPPA
PAPAPAAPVTAAAPTSSAAPTGSTFLAVQ

Transcript Sequence

Transcript ID

OQU85750
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:4:63930522:63933298:1 gene:SORBI_3004G300500 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

CAAGCCGTAATCTTTTCTTTTTCCTCGCCCTCCTTTGCCTGCTGGCTGGCTGGCTGGCTG
CTGCCGCGGAATGCGGCTAACGGTTTCACGGAATTTCACCTCTTCTCCGTGTCCGGCGTT
GTTGCGTCGCCGGTGAAATGATGGGGAGCTATCCTGTCGTCTATCTTTACCCGGCCACTG
CTTTTCCCCAGCGCGCTTTTGGCGTAATGCTCCCCGGTTTCTGTGAGATTGGAGCCTAGT
GAAGTGGTAGGTGCCGCCAGGGCGCCAGCGCAGGCGCAGGCAGGACGATAAGGATCTGGA
GTCCGTCGGCGCCCGGGCAGCCGTATGCCGCGGCGTGATTGTGCGTGCAGGCGCAGGCCG
CACACACAGACATGGCGGCAGCAGCAGCAGCCTGCTGCTGCAGGCTATCACGGCACTGTT
TTTCTATTCCCTCTATTCCTTTTAAAACACACTTGGACTTTGATGGATGCACCAAGTTTT
CCGGGGGGGAGAAAGGTTGGAAAAGCATTTCGCTGGCTGCACCGGCGGCCTGCCGCTGTC
ATCACCGCTTAGTATGTTTGTTCCTCGGACACGATGCCATCAACTTGACATCATCAGTTC
ATCACCACATCTCTCTCTCTCTCTCTCTTTGTGCTGATTGATTATTCCTAGCACTGCTGA
CGGCTGATGCTTCCACCGTCGTCGTCGCTTTACATGTCTGTCCGTGTCTCCGATCCGCTT
CCAAATTCCAATTCCTTCCGCGTCTGTTCGTCCAGTCCTTTTCAGAGAAAGAGGAAGAAT
GATGGCAAGCTTTGACCACTCACTTAGATGAAAGATACTCCTCTGCACACGCACACTGCA
CACACAACCCAAGTCATCACCTCTTCATGACTCATGCTGGTTGAGACGTGAACGCGAGAA
ATAGCTAACAGGTGAGGCGTCCGTGCTGGGGCGCATTTTTTTTTTTTTTTTTTGGTTTGC
AGGAAGCTTGCAGAGCTGGGCTACCAACGGAGCGCCAAGAAGTGCAAGGAGAAGTTCGAG
AACGTGGACAAGTACTACAAGCGCACCAAGGACGCCCGCGCCGGGCGCCAGGACGGCAAG
AGCTACCGCTTCTTCTCGCAGCTCGAGGCGTTGCACGCCGCGGCGCCGCCGCAGCTGCTG
CTGCCGCCGCCGCCCCCCTCGGGCATGAGCATGACCACGGTGCAAGCTGGCCCTCATCAG
CCCATGGCAATGGCATGGACGGCGGGCCCTTCGGCGCTGGGCCCTCCTGCCGGCGCCGGC
CTGCCGGACCTCAGCTTCTCGTCGATGTCAGGGTCAGAGTCCGAATCCGACTCCTACTCG
GACGACTACGACTACGACGACTCTGATGCCGGGGAGGAGGGCCTCGGCAGGGAGCAGGGC
CTCGGCAGGGGCGAGTGCGACAGGGAGATGATGGCGATCTTCGAGGGGATGATGAAGCAG
GTCACGGAGAAGCAGGACGCCATGCAGCGCGTGTTCCTGGAGACGCTGGAGCGGTGGGAG
GCGGAGCGCACGGCGCGCGAGGAGGCGTGGCGGCGCCAGGAGGTCGCCCGCATGAACCGC
GAGCGCGAGCAGCTCGCCAGGGAGCGCGCCGCCGCGGCCTCCCGCGACGCCGCGCTGATC
GCGTTCCTCCAGCGCGTCGGCGGGGGACAGGGGCAGCCCGTGGCGCGGCTCCCTCCGCAC
AGCGCCGGCGTCGTGCCCGCGCCGCCAATTCCGGACCACACCCCTTCGTCGCCTCGTCGC
CACGACGCGGCGGCGGCGGCCACCTATCTTCAGCAGCTGGTGCCCACGTCGCACAAGGCG
GTGGAGGCCTTGACGTGGACGGGAGGCGAGGGCAGCGGGTCCACGTCGTCGTCGCGGTGG
CCCAAGGAGGAAGTGGAGGCGCTGATCCAGATGCGGAACGAGAAGGACGAGCAGTACCAT
GACGCGGGGGGCAAAGGCCCGCTTTGGGAGGACATCGCCGCCGGGATGCGCAGGATCGGG
TACAACCGGAGCGCCAAGCGGTGCAAGGAGAAGTGGGAGAACATCAACAAGTACTACAAG
AAGGTGAAGGAGAGCAACAAGAGGCGCCCCGAGGACTCCAAGACCTGTCCGTACTTCCAC
CAGCTCGACGCCATGTACAGCAAGAAACACCGTGCTGGCGGCGGCAGAGGCAGCAGCAGA
ACCGCACCTGCAGCCAACATGGCCACCGCCGTCACCGTCGCCGTCGCCGTCGCCGCTGCC
GTGCAGGACAACCCGAGCCAGCGCGAGCTCGAGGGAAAGAGCAGCAACGATGTCGACCAC
CGGAAGAATGATGAACTGGGAAACGTGCAGGCTTCTCCCGGCAACGGCGATACAGCACCA
ACGACCACCACCCCGCCTGGCGACGGCGCCAAAAACAAGACGGCAGAGGACAATGTGACT
GAAACAAATGTGCAGCACCAGCAGCAACAGCAGCAGGGGTTCAGTGCGGACGAGACGGAC
AGCGACGACGACATCAACATGGCAAGAGACTACACAGTCTACACTGAAGAAGGCAACGAC
GAAGACAAAATGAAGTACAAGATGGGCGTCCAGAAGCCTGATGTGATCGGGAGCAGCGGC
AACGTACCTGCATCACCACCAGCACCAGCACCAGCACCGGCAGCACCAGTGACGGCTGCA
GCACCGACGAGTTCAGCTGCCCCAACGGGCAGCACCTTCCTTGCCGTTCAGTAG