Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

OQU85746
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:4:63884676:63891412:-1 gene:SORBI_3004G300000 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGCTTGCGCCGCCGCGGAAACCCTCGCCTCGTTCCCAATCGCATCCCCGTCCCGCTCG
CTCCTACGCCCCTTCCCCCAGCGACCAGCCGCCGCCGCCGCTGCCGCCGGGAGAGGCGCA
GCGTCGATCCGGATATCCGCCGTGCCGCCGCGGGGCCTCGGGCTCGCGCTCGTGCACCGC
CGCGTGCGCCGCTGCCCGCCAGCGGCGCGCGCGAATGTCGAGCGCGACGGCGACGGCGCC
TCCGGCAACGGCGAGCCGTCGTCCTCGTCCGGGGATGGCGGCGACCGCGACGCGGCTGCG
GAGTCCGGGGGCGATACCACCAGCACGAGCACCACGAGCGCGGCCGCGACGCCGCCGCCG
CCCTCGTCGAAGAGGGGCGAAAATAAGTGGCGGCGGAGGCTGATTAAGGGAGGCGGCGGC
GTCGGGCGGTGGCTATGGGAGCCCATAGTCCAGGGGCGGGAGATGGGCTTCCTCCTGCTC
CAGCTCGGCTTCGCCATATTTGCTCTACGCATGCTTCGGCCAGAGATCGCGTTGCCTGGT
TCAGAGCCCCGCCCGCAGACCACCTACGTCAGTGTACCATACAGCGACTTCCTGGCGAGC
ATAGACAAGGACCAGGTGAAGAAGGTTGAGGTGGACGGGGTGCACATCATGTTCCGGCTC
CGCCCAGAGGTTGAGTCCCAGGTCCGTGTGGTGCAGACACCAACACAGCGCGGAGCAGAT
GCTGTGGTTGATAACACTGGAGCTTCAAGGAGAATTGTATTCACGACGACTCGTCCAGTG
GACATAAAGACACCGTACGAGAAGATGGTGGAAAACATGGTTGAATTTGGGTCACCAGAC
AAGAGGTCCGGCGGCATGCTCAATTCTGCCCTGGTAGCTCTTATTTATGTTGTATTGATT
GCAGTAGTTTTGCAGCGGTTGCCAATAAGCTTTTCTCAGAATTCAGCCGGTCAGTTGAGG
AATAGGAAGAATTCAAATTCTGGTGGCACAAAAGTTTCCGAAAGTACAGATATAGTTACA
TTTGCTGATGTGGCTGGAGTAGATGAGGCAAAAGAAGAGCTGGAAGAAATCGTGGAGTTC
TTAAGGAACCCAGACAGATATATTCGTCTTGGTGCTCGCCCTCCTCGTGGTGTCTTATTG
GTGGGTCTTCCAGGGACTGGAAAGACACTTCTTGCAAAAGCCGTAGCAGGAGAAGCAGAA
GTCCCATTCATAAGTTGCTCTGCTAGTGAATTTGTTGAGCTGTATGTAGGCATGGGCGCA
GCTCGAGTACGTGACCTATTTGCTAGGGCCAAAAAGGAATCACCTTCAATTATTTTTATC
GATGAGATTGATGCCGTTGCAAAAAGCCGTGATGGTCGATATCGCATTGTCAGTAATGAT
GAACGTGAGCAGACACTAAACCAATTGCTCACGGAAATGGATGGCTTTGACACCAACTCG
GCTGTCATTGTACTGGGGGCAACAAATCGAGCTGATGTTTTGGATCCTGCCCTTAGGCGC
CCTGGGAGATTTGACCGTGTAGTTATGGTTGAAGCTCCTGATAGGTTTGGGAGAGAATCA
ATTCTAAAAGTTCATGTGAACAGAAGAGAGCTTCCACTGAGTAAAGATGTAAATCTAGCT
GATATTGCTGCAATGACAACTGGTTTTACTGGAGCAGACCTTGCAAACTTGGTAAATGAA
GCTGCTTTGTTGGCTGGGCGGTTAAATAAAGAAATGGTGGAAAAGATTGACTTCATCCGT
GCGGTTGAGCGATCTATAGCAGGGATAGAGAAAAAACATGCTAAATTGAAGGGTAATGAA
AAAGCTGTTGTTGCACGGCATGAAGTTGGTCATGCACTTGTGGGGACTGCCGTAGCAAAC
CTTCTTCCTGGACAGCCACGTGTGGAGAAATTGAGTATATTGCCAAGATCAGGAGGTGCA
TTAGGCTTCACGTACACCCCTCCCACCACAGAGGATAGATATTTACTCTTTGTTGATGAA
CTACGTGGCCGTTTAGTAACACTTCTTGGTGGGAGGGCAGCAGAGGAAGTTGTTTTAGGA
GGACGGGTTTCCACTGGTGCACTTGATGACATAAGACGTGCTACTGACATGGCCTACAAA
GCTGTAGCAGAATATGGTCTTAATCAGCGCATCGGGCCAATATCACTTGCTACACTGTCA
AATGGTGGGTTAGATGACTCTGGTGGCTCTCCATGGGGAAGAGATCAGAGAACGAAAAGG
TTGAAGGCGAGGAGCTTCAAGAGTGGCTAA

Peptide Sequence

PEP ID

OQU85746
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:4:63884676:63891412:-1 gene:SORBI_3004G300000 transcript:OQU85746 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MACAAAETLASFPIASPSRSLLRPFPQRPAAAAAAAGRGAASIRISAVPPRGLGLALVHR
RVRRCPPAARANVERDGDGASGNGEPSSSSGDGGDRDAAAESGGDTTSTSTTSAAATPPP
PSSKRGENKWRRRLIKGGGGVGRWLWEPIVQGREMGFLLLQLGFAIFALRMLRPEIALPG
SEPRPQTTYVSVPYSDFLASIDKDQVKKVEVDGVHIMFRLRPEVESQVRVVQTPTQRGAD
AVVDNTGASRRIVFTTTRPVDIKTPYEKMVENMVEFGSPDKRSGGMLNSALVALIYVVLI
AVVLQRLPISFSQNSAGQLRNRKNSNSGGTKVSESTDIVTFADVAGVDEAKEELEEIVEF
LRNPDRYIRLGARPPRGVLLVGLPGTGKTLLAKAVAGEAEVPFISCSASEFVELYVGMGA
ARVRDLFARAKKESPSIIFIDEIDAVAKSRDGRYRIVSNDEREQTLNQLLTEMDGFDTNS
AVIVLGATNRADVLDPALRRPGRFDRVVMVEAPDRFGRESILKVHVNRRELPLSKDVNLA
DIAAMTTGFTGADLANLVNEAALLAGRLNKEMVEKIDFIRAVERSIAGIEKKHAKLKGNE
KAVVARHEVGHALVGTAVANLLPGQPRVEKLSILPRSGGALGFTYTPPTTEDRYLLFVDE
LRGRLVTLLGGRAAEEVVLGGRVSTGALDDIRRATDMAYKAVAEYGLNQRIGPISLATLS
NGGLDDSGGSPWGRDQRTKRLKARSFKSG

Transcript Sequence

Transcript ID

OQU85746
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:4:63884676:63891412:-1 gene:SORBI_3004G300000 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

CTCAAACCAAACGGATAAGCTCCGCCCGGCGCCCGCGCAAGCTGATATCATCAAGAAGCA
GTCACTGACGGTGGGCCCTTAGACCTTTGTTAAAATCGTGGGTCCCATATGTCAGTTATC
GTTTGCGAGAGTAGGTTTGGCAGAGGAGTATCCTTAACAACCGGGCTTGACGGCGTGATG
ATACTCAGCAAACGGCCGCCACCCCCTTCCCTTTCCCTCCATCCCTCTTCGTCTCGTATC
GACCTCTTTCCTTCCTCTCTTCCTCATCTTCCTCTCCTCTCTCGTCTCCTCACCCCCCGC
CCCACCCGCGAACCGATTCCTCAACGCGCACGTGCGCAGCAGCAGCGGCGGAGTCGGGCG
AGCTCCGTGGTGTTGCTTCTCGCTCAACCCGCACGCTAGGACGTCTAGGGTTCGTGCCTT
CCTCCTCCGTATGGCTTGCGCCGCCGCGGAAACCCTCGCCTCGTTCCCAATCGCATCCCC
GTCCCGCTCGCTCCTACGCCCCTTCCCCCAGCGACCAGCCGCCGCCGCCGCTGCCGCCGG
GAGAGGCGCAGCGTCGATCCGGATATCCGCCGTGCCGCCGCGGGGCCTCGGGCTCGCGCT
CGTGCACCGCCGCGTGCGCCGCTGCCCGCCAGCGGCGCGCGCGAATGTCGAGCGCGACGG
CGACGGCGCCTCCGGCAACGGCGAGCCGTCGTCCTCGTCCGGGGATGGCGGCGACCGCGA
CGCGGCTGCGGAGTCCGGGGGCGATACCACCAGCACGAGCACCACGAGCGCGGCCGCGAC
GCCGCCGCCGCCCTCGTCGAAGAGGGGCGAAAATAAGTGGCGGCGGAGGCTGATTAAGGG
AGGCGGCGGCGTCGGGCGGTGGCTATGGGAGCCCATAGTCCAGGGGCGGGAGATGGGCTT
CCTCCTGCTCCAGCTCGGCTTCGCCATATTTGCTCTACGCATGCTTCGGCCAGAGATCGC
GTTGCCTGGTTCAGAGCCCCGCCCGCAGACCACCTACGTCAGTGTACCATACAGCGACTT
CCTGGCGAGCATAGACAAGGACCAGGTGAAGAAGGTTGAGGTGGACGGGGTGCACATCAT
GTTCCGGCTCCGCCCAGAGGTTGAGTCCCAGGTCCGTGTGGTGCAGACACCAACACAGCG
CGGAGCAGATGCTGTGGTTGATAACACTGGAGCTTCAAGGAGAATTGTATTCACGACGAC
TCGTCCAGTGGACATAAAGACACCGTACGAGAAGATGGTGGAAAACATGGTTGAATTTGG
GTCACCAGACAAGAGGTCCGGCGGCATGCTCAATTCTGCCCTGGTAGCTCTTATTTATGT
TGTATTGATTGCAGTAGTTTTGCAGCGGTTGCCAATAAGCTTTTCTCAGAATTCAGCCGG
TCAGTTGAGGAATAGGAAGAATTCAAATTCTGGTGGCACAAAAGTTTCCGAAAGTACAGA
TATAGTTACATTTGCTGATGTGGCTGGAGTAGATGAGGCAAAAGAAGAGCTGGAAGAAAT
CGTGGAGTTCTTAAGGAACCCAGACAGATATATTCGTCTTGGTGCTCGCCCTCCTCGTGG
TGTCTTATTGGTGGGTCTTCCAGGGACTGGAAAGACACTTCTTGCAAAAGCCGTAGCAGG
AGAAGCAGAAGTCCCATTCATAAGTTGCTCTGCTAGTGAATTTGTTGAGCTGTATGTAGG
CATGGGCGCAGCTCGAGTACGTGACCTATTTGCTAGGGCCAAAAAGGAATCACCTTCAAT
TATTTTTATCGATGAGATTGATGCCGTTGCAAAAAGCCGTGATGGTCGATATCGCATTGT
CAGTAATGATGAACGTGAGCAGACACTAAACCAATTGCTCACGGAAATGGATGGCTTTGA
CACCAACTCGGCTGTCATTGTACTGGGGGCAACAAATCGAGCTGATGTTTTGGATCCTGC
CCTTAGGCGCCCTGGGAGATTTGACCGTGTAGTTATGGTTGAAGCTCCTGATAGGTTTGG
GAGAGAATCAATTCTAAAAGTTCATGTGAACAGAAGAGAGCTTCCACTGAGTAAAGATGT
AAATCTAGCTGATATTGCTGCAATGACAACTGGTTTTACTGGAGCAGACCTTGCAAACTT
GGTAAATGAAGCTGCTTTGTTGGCTGGGCGGTTAAATAAAGAAATGGTGGAAAAGATTGA
CTTCATCCGTGCGGTTGAGCGATCTATAGCAGGGATAGAGAAAAAACATGCTAAATTGAA
GGGTAATGAAAAAGCTGTTGTTGCACGGCATGAAGTTGGTCATGCACTTGTGGGGACTGC
CGTAGCAAACCTTCTTCCTGGACAGCCACGTGTGGAGAAATTGAGTATATTGCCAAGATC
AGGAGGTGCATTAGGCTTCACGTACACCCCTCCCACCACAGAGGATAGATATTTACTCTT
TGTTGATGAACTACGTGGCCGTTTAGTAACACTTCTTGGTGGGAGGGCAGCAGAGGAAGT
TGTTTTAGGAGGACGGGTTTCCACTGGTGCACTTGATGACATAAGACGTGCTACTGACAT
GGCCTACAAAGCTGTAGCAGAATATGGTCTTAATCAGCGCATCGGGCCAATATCACTTGC
TACACTGTCAAATGGTGGGTTAGATGACTCTGGTGGCTCTCCATGGGGAAGAGATCAGAG
AACGAAAAGGTTGAAGGCGAGGAGCTTCAAGAGTGGCTAAAGTCGGTTGTTGCACCAAAA
GAGTTGACCTCTTTTATCAGAGGACAGCAAGAGCAAGTTCTTCAGCTGGAAGCAAGCTCC
TAGCATCAGGAGTAAACATTGGAATTAAAGTTAATTACATAACAAAACTAGCTCAACAAT
TAGAACATACCATGCGAGTTCCAAGATATGCAATGGAAACCTTCATACTGGGAACAGACC
TGTGGCCATGTGGTGGGTTGTTTGACCTCCCACCCACTCGTGCTAAGACAAACTGGGTCT
GGTAAGATAAACTGGGTCGGACACCCACACTTCGGTGAATCACGAGTTCGAGCCAGGAGA
GTTTTCAGAAAAGGAAATCGACATGCCCGAGTGATGATGTAAATATCTATCATTGCAGTT
CCTGGACCCTTGACTACAGAAAAGAAAAAAAAAAGGAATCCAGAGATGATTCATATTGAG
CTGTAACATTGTAACATCAACCTCAGGAATATTTAAGTGATTCAGTTTCACATGTTGTTC
ATAGATTAAGTCGGTGTTACACATGTAAAAGATTCTTTTTTCTCCCTAGGTTCTTGTCCT
CTCGCTATTGGAAGTTATTTTTCTCCTCTATTTACAATACAATCCTAGAAATGATCAATA
GGATAATGCTTATACGGACTATGGTTCCTGTATTGATATACTTTTTGCAATATACATTGG
GCTTCGAATCCATCATT