Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

OQU85714
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:4:63570690:63575500:-1 gene:SORBI_3004G295900 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGCTTCCGCCAAGGAGACCTATCGCGCCGAGCTCCGCGCCGCCGCCCGCCAGCTTGGA
GAGCGCTGCCTCTACTCCGCCGCTAAATGGGCCGCCGAGCTGCTCGTCGGTGTAGAGCCG
GATGCGGCCCCGGTCCCGTCGGCCGTGATGGACACCCCTTCCTCCTCGTCCGCGACCTCC
GCGGGGCGGCTATTGCACCTGCACCGTAGTGGGGGTTCCAGCTTCCGCCACCGCCCCCGC
CCCGCTGGCGGCGGCACTAGCTCGGAGGCCGGGACCCCTCTCGGTGGCGTGTCGTACGTC
AGCACGCCCATCCCCGACGACGATGCGTTCGATTCGGGCGGCGACAAGTACCTGCTGGCC
AAGACCTATTTCGACTGTCGGGAGTACCGCCGCGCTGCGCATGTGCTGCAGAAGCAGGTC
GGGCGTAAGGCTGTGTTCCTGCGATGCTACGCGCTCTACATGGCTGGAGAGAAGCGGAAA
GAGGCAGAGATGATAGAGCTTGAAGGATCGTTGGGCAAGAGTAATGCTGTTAATCAGGAA
CTAATTGCTTTGGAGAAAGAGCTCTCAACACATAAAAGAACTGGATCTATTGATTCGTTT
GGACTCTACTTGTATGGCATTGTTCTACGTGATAAAGGATGTGAAGGTCTAGCTAGAACG
ATCTTGGTAGAATCTGTCAATAGCTATCCTTGGAACTGGAGTGCTTGGTCAGAGTTACAA
TCTTTATGTACCAGCAGTGACATTTTAAACAAGTTAAATCTGAAGAATCACTGGATGAAA
GACTTCTTTCTTGCTAGTGCATATTTGGAACTAAAGATGCATGAAGAAGCTCTTAAAAGA
TATGAACGCTTGATGGGGGTCTTCCGCTGCAGTGGTTACATTCAGGCTCAAATTGCAACA
GTTCAGTACAGTATGAGGGACCTTGATGAAGCTGAGATGATTTTCGAAGATCTGCTCAGG
ACTGATCCTTTTCGTGTGGATTCTATGGATATTTACTCAAATTTACTATATGCAAAAGAA
AGCTTGACTGCTTTGAGTTTCCTTGCGCACAGAGTATTTTTGACAGATAAATACCGCCCA
GAATCTTGCTGCATAATTGCAAATTACTACAGTCTGAAGGGTCAGCATGAGAAATCAGTT
TTGTACTTTCAAAGGGCACTAAAGCTTAATCGAAAGTACCTCTCAGCTTGGACCCTGATG
GGGCATGAGTATGTTGAACTGAAGAATACTCCTGCTGCAATTGATGCCTACAGAAGAGCT
GTTGATATTAATCCTAGAGATTTCCGTGCTTGGTATGGTCTTGGTCAAATCTATGAGATG
ATGGGGATGCCGTTTTATGCACTTCATTACTTCCGGAAATCGTCATACTTGCAACCCAAT
GATGCTCGTCTCTGGATTGCCATGGCTCAGTGTTACGAAAGTGATCCACTTCAAATGATT
GAAGAAGCCATCAAGTGCTATGAGAGAGCTGCAGATAGCAATGACACTGAAGGAATAGCA
CTTCACCAACTAGCAAAATTGCATGGAATGCTGGGGCAATCTGAGGAAGCTGCGTTCTAC
TACAAGAAGGATTTAGAGAGAATGGAGGTTGAGGAAAGGCAAGGCCAGAATGTTGTTGAA
GCTCTGCTGTTCCTTGCTAAGTATAACAAGAGCATAGGCAAGTTTGAGGAAGCAGAGGAC
TATTGTACAAGGCTTTTGGATTACACTGGCCCATTCCTGGAGCTTGGCAACAAGGAGAAC
CAGGCGCCTGCATGGTGCGAAGATGAGCGTCATTGGAATGAGCCAGATCCCTAA

Peptide Sequence

PEP ID

OQU85714
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:4:63570690:63575500:-1 gene:SORBI_3004G295900 transcript:OQU85714 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MASAKETYRAELRAAARQLGERCLYSAAKWAAELLVGVEPDAAPVPSAVMDTPSSSSATS
AGRLLHLHRSGGSSFRHRPRPAGGGTSSEAGTPLGGVSYVSTPIPDDDAFDSGGDKYLLA
KTYFDCREYRRAAHVLQKQVGRKAVFLRCYALYMAGEKRKEAEMIELEGSLGKSNAVNQE
LIALEKELSTHKRTGSIDSFGLYLYGIVLRDKGCEGLARTILVESVNSYPWNWSAWSELQ
SLCTSSDILNKLNLKNHWMKDFFLASAYLELKMHEEALKRYERLMGVFRCSGYIQAQIAT
VQYSMRDLDEAEMIFEDLLRTDPFRVDSMDIYSNLLYAKESLTALSFLAHRVFLTDKYRP
ESCCIIANYYSLKGQHEKSVLYFQRALKLNRKYLSAWTLMGHEYVELKNTPAAIDAYRRA
VDINPRDFRAWYGLGQIYEMMGMPFYALHYFRKSSYLQPNDARLWIAMAQCYESDPLQMI
EEAIKCYERAADSNDTEGIALHQLAKLHGMLGQSEEAAFYYKKDLERMEVEERQGQNVVE
ALLFLAKYNKSIGKFEEAEDYCTRLLDYTGPFLELGNKENQAPAWCEDERHWNEPDP

Transcript Sequence

Transcript ID

OQU85714
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:4:63570690:63575500:-1 gene:SORBI_3004G295900 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGGTAGCTATAACCCGGTGGGTAATTACCCATTGCCATCTTTACTCCGAACAAACCTC
AATATCATCATCTCGTCCACTTCCACTCCGCGGTTCCACATCTCGCAAAAATTCAAACAA
ATTTTGCGCTCTCAACACTGCGTCAATCCGCTCCAAGCCAGCCCCGACCGGAGCAATGGC
TTCCGCCAAGGAGACCTATCGCGCCGAGCTCCGCGCCGCCGCCCGCCAGCTTGGAGAGCG
CTGCCTCTACTCCGCCGCTAAATGGGCCGCCGAGCTGCTCGTCGGTGTAGAGCCGGATGC
GGCCCCGGTCCCGTCGGCCGTGATGGACACCCCTTCCTCCTCGTCCGCGACCTCCGCGGG
GCGGCTATTGCACCTGCACCGTAGTGGGGGTTCCAGCTTCCGCCACCGCCCCCGCCCCGC
TGGCGGCGGCACTAGCTCGGAGGCCGGGACCCCTCTCGGTGGCGTGTCGTACGTCAGCAC
GCCCATCCCCGACGACGATGCGTTCGATTCGGGCGGCGACAAGTACCTGCTGGCCAAGAC
CTATTTCGACTGTCGGGAGTACCGCCGCGCTGCGCATGTGCTGCAGAAGCAGGTCGGGCG
TAAGGCTGTGTTCCTGCGATGCTACGCGCTCTACATGGCTGGAGAGAAGCGGAAAGAGGC
AGAGATGATAGAGCTTGAAGGATCGTTGGGCAAGAGTAATGCTGTTAATCAGGAACTAAT
TGCTTTGGAGAAAGAGCTCTCAACACATAAAAGAACTGGATCTATTGATTCGTTTGGACT
CTACTTGTATGGCATTGTTCTACGTGATAAAGGATGTGAAGGTCTAGCTAGAACGATCTT
GGTAGAATCTGTCAATAGCTATCCTTGGAACTGGAGTGCTTGGTCAGAGTTACAATCTTT
ATGTACCAGCAGTGACATTTTAAACAAGTTAAATCTGAAGAATCACTGGATGAAAGACTT
CTTTCTTGCTAGTGCATATTTGGAACTAAAGATGCATGAAGAAGCTCTTAAAAGATATGA
ACGCTTGATGGGGGTCTTCCGCTGCAGTGGTTACATTCAGGCTCAAATTGCAACAGTTCA
GTACAGTATGAGGGACCTTGATGAAGCTGAGATGATTTTCGAAGATCTGCTCAGGACTGA
TCCTTTTCGTGTGGATTCTATGGATATTTACTCAAATTTACTATATGCAAAAGAAAGCTT
GACTGCTTTGAGTTTCCTTGCGCACAGAGTATTTTTGACAGATAAATACCGCCCAGAATC
TTGCTGCATAATTGCAAATTACTACAGTCTGAAGGGTCAGCATGAGAAATCAGTTTTGTA
CTTTCAAAGGGCACTAAAGCTTAATCGAAAGTACCTCTCAGCTTGGACCCTGATGGGGCA
TGAGTATGTTGAACTGAAGAATACTCCTGCTGCAATTGATGCCTACAGAAGAGCTGTTGA
TATTAATCCTAGAGATTTCCGTGCTTGGTATGGTCTTGGTCAAATCTATGAGATGATGGG
GATGCCGTTTTATGCACTTCATTACTTCCGGAAATCGTCATACTTGCAACCCAATGATGC
TCGTCTCTGGATTGCCATGGCTCAGTGTTACGAAAGTGATCCACTTCAAATGATTGAAGA
AGCCATCAAGTGCTATGAGAGAGCTGCAGATAGCAATGACACTGAAGGAATAGCACTTCA
CCAACTAGCAAAATTGCATGGAATGCTGGGGCAATCTGAGGAAGCTGCGTTCTACTACAA
GAAGGATTTAGAGAGAATGGAGGTTGAGGAAAGGCAAGGCCAGAATGTTGTTGAAGCTCT
GCTGTTCCTTGCTAAGTATAACAAGAGCATAGGCAAGTTTGAGGAAGCAGAGGACTATTG
TACAAGGCTTTTGGATTACACTGGCCCATTCCTGGAGCTTGGCAACAAGGAGAACCAGGC
GCCTGCATGGTGCGAAGATGAGCGTCATTGGAATGAGCCAGATCCCTAATGCAAATATCA
GCATAGCTGCCTTGTCTGTGAGAGCTCTAAATCTCTGTGGGCTTGGTTTCCTTCACCGGA
CAACTCTGGTTAGTGTTTTCCCCATGGTTGCTTGCATATATAAGCTTCCTTGGGAGACTT
GCTTTGCCTTGTGTGCGATCTGCATGTTACATTATTGCTTGTCCAGTTGTCATCACAGTA
GTCCATTGTCTTGCCTTGGCGTTTTGGAAAAGTATTAATCATTTGCGATTTTTTTTGTTT
AATAAAAAGCTACGTAGATTGTAGGGCAAGGATGTGGTAGTACTTTACACACTCTGCTTG
ATGGATCATGGGAGTATAGTAAATCTGTTTACTGATGCGTGATGCAAGTTATTTTAGCGA
ACGATATCATCTACAC