Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

OQU85638
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:4:62464820:62468075:-1 gene:SORBI_3004G282900 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGTTAATTTCGGTAAGAAATTGATGGCAGACCAGTTGGAGGAGTGGCGAGAATATTAT
ATTAATTATAAGATGATGAAGAAAAAGGTGAAACAGTATGTACAGCAGACCCAAACTGGT
GGAAAAAATCGTGACCAGGTTCTTAAGGAGTTCTCAAGGATGCTTGATGACCAGATTGAA
AAGGTTGTACTATTTCTTCTGCAACAACAAGGTCATCTTGCTAGGAGGATCGAGAAATTA
GGAGTACAGCGTGCCATGCTTATGCAACAGTCTGATGTATCCCAAATTTGTCAACTACGC
CAGGCTTACAGGGAAGTTGGGTATGATCTTGTGAAGCTACTTAGGTTTCTTGATATGAAT
GCTACTGGTATCCGGAAGATACTTAAGAAGTTCGATAAGCGCTTTGGCTATAAGTTCACA
GATTATTACGTCTCTACTCGAGCAAACCATCCTTATTCTCAGCTTCAGCAGATCTTCAAG
CAAGTGGGAGTCGTCGCCGTTGTTGGTGCTTTGTCTCGCAACCTTGCTTATCTACAAGAT
CATCAAGGATACTTAGCAAATATCTATGATTACCCATCACTCATCTTGAAGGATCCCGTC
ATAGAACAAATAAATCATTCAGTACAGAAACTCACACACTCCACAAGCTTTCTGCAATTT
TTAGGGCAACATGCACTTATCGTTCCGGAGGATATGCAGAGTGGCTCAGATCTCGATGAT
GACAAGGATTACCATTTCCTGTCACTGCTGCTAAACTTAGTAAACACGTTTCTGTACATG
GTTAACACATACATCATCGTTCCAACTGCTGATGACTATTCAGTGAGCCTCGGAGCTGCA
GCGACTGTTTGCGGTGTGATTATCGGATCAATGGCAGTCGCCCAAATCTTCTCCTCAGTA
TATTTCAGTGCCTGGTCGAACAAATCGTACTTCAGACCCCTGGTATTTAGCAGCATTATG
CTATTTCTGGGGAACCTGTTGTATGCTTTGGCATATGATCTTAATTCCCTAACTGCTCTT
ATTGTCGGTCGACTACTGTGCGGTTTGGGTTCGGCCAGAGCCGTGAACCGCCGCTACATC
AGCGACTGTGTACCCCTGAAAAGCAGGATGCAGGCATCTGCTGGGTTTGTCAGTGCTAGT
GCTCTTGGAATGGCATGTGGTCCTGGTCTTGCCGGTCTGCTGCAGACAAAATTTAAGATC
TATGGGCTTACATTCAATCAGAACACCTTACCTGGGTGGGTCATGTGTGTTGCTTGGCTT
GCATATTTGTTCTGGTTGTGGATTTCATTCAAAGAGCCAGGCCATATTGCTTCAGAGAAT
TCAGTCAACACGCAGTCATCTGATTCTGGCCGTCCAGTAAGCGGTAATTTGGAGGATGGC
GTCAGAGAGCCTTTGCTCATAGATGCGAAGGCAGGACCGGATGACGATGTTGAGGACAAT
GACGACAACGATGACGACCCCGAGGAATCTCATAGACCCGCGACATCGCTTGCTGCAGCA
TACAGATTGCTGACACCATCTGTGAAGGTTCAGCTACTGATCTACTTTATGCTCAAGTTC
GCCATGGAAATCCTACTCTCGGAGTCAAGTGTTGTGACCACGTTCTATTTCAAGTGGACA
ACTAGTACCGTGGCAATCTTTCTAGCAGTTCTTGGCCTGACGGTTCTTCCCGTTAATGTC
ATCGTCGGGAGCTATGTCACCAACTTGTTCCAGGACAGGCAAATTCTGGTGGCCTCCGAG
ATCATGGTGTTGATCGGCATTGTCATGAGCTTCCGCTTCACCCCTCACTACTCCGTTCCC
CAATATGTCACGTCAGCTCTCATCACCTTCGTATTCGCCGAGGTGCTCGAAGGAGTGAAC
CTGTCCCTCCTCTCTCGCGTGATGTCGTCGAGGCTCTCCCGCGGGACCTACAACGGCGGG
CTGCTCTCGACGGAGGCCGGAACGCTGGCCCGCGTCGCCGCCGACATGACTATCACGGCG
GCGGGCAACCTGGGGCAGAGCCGCCTCCTGAACGCCACCCTCCTGCCGTCCCTGGTGATC
TGTTTAGCCTCTATCGTCGCGACGTTCTGCACTTACAACTCACTCTACTGA

Peptide Sequence

PEP ID

OQU85638
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:4:62464820:62468075:-1 gene:SORBI_3004G282900 transcript:OQU85638 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MVNFGKKLMADQLEEWREYYINYKMMKKKVKQYVQQTQTGGKNRDQVLKEFSRMLDDQIE
KVVLFLLQQQGHLARRIEKLGVQRAMLMQQSDVSQICQLRQAYREVGYDLVKLLRFLDMN
ATGIRKILKKFDKRFGYKFTDYYVSTRANHPYSQLQQIFKQVGVVAVVGALSRNLAYLQD
HQGYLANIYDYPSLILKDPVIEQINHSVQKLTHSTSFLQFLGQHALIVPEDMQSGSDLDD
DKDYHFLSLLLNLVNTFLYMVNTYIIVPTADDYSVSLGAAATVCGVIIGSMAVAQIFSSV
YFSAWSNKSYFRPLVFSSIMLFLGNLLYALAYDLNSLTALIVGRLLCGLGSARAVNRRYI
SDCVPLKSRMQASAGFVSASALGMACGPGLAGLLQTKFKIYGLTFNQNTLPGWVMCVAWL
AYLFWLWISFKEPGHIASENSVNTQSSDSGRPVSGNLEDGVREPLLIDAKAGPDDDVEDN
DDNDDDPEESHRPATSLAAAYRLLTPSVKVQLLIYFMLKFAMEILLSESSVVTTFYFKWT
TSTVAIFLAVLGLTVLPVNVIVGSYVTNLFQDRQILVASEIMVLIGIVMSFRFTPHYSVP
QYVTSALITFVFAEVLEGVNLSLLSRVMSSRLSRGTYNGGLLSTEAGTLARVAADMTITA
AGNLGQSRLLNATLLPSLVICLASIVATFCTYNSLY

Transcript Sequence

Transcript ID

OQU85638
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:4:62464820:62468075:-1 gene:SORBI_3004G282900 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGTTAATTTCGGTAAGAAATTGATGGCAGACCAGTTGGAGGAGTGGCGAGAATATTAT
ATTAATTATAAGATGATGAAGAAAAAGGTGAAACAGTATGTACAGCAGACCCAAACTGGT
GGAAAAAATCGTGACCAGGTTCTTAAGGAGTTCTCAAGGATGCTTGATGACCAGATTGAA
AAGGTTGTACTATTTCTTCTGCAACAACAAGGTCATCTTGCTAGGAGGATCGAGAAATTA
GGAGTACAGCGTGCCATGCTTATGCAACAGTCTGATGTATCCCAAATTTGTCAACTACGC
CAGGCTTACAGGGAAGTTGGGTATGATCTTGTGAAGCTACTTAGGTTTCTTGATATGAAT
GCTACTGGTATCCGGAAGATACTTAAGAAGTTCGATAAGCGCTTTGGCTATAAGTTCACA
GATTATTACGTCTCTACTCGAGCAAACCATCCTTATTCTCAGCTTCAGCAGATCTTCAAG
CAAGTGGGAGTCGTCGCCGTTGTTGGTGCTTTGTCTCGCAACCTTGCTTATCTACAAGAT
CATCAAGGATACTTAGCAAATATCTATGATTACCCATCACTCATCTTGAAGGATCCCGTC
ATAGAACAAATAAATCATTCAGTACAGAAACTCACACACTCCACAAGCTTTCTGCAATTT
TTAGGGCAACATGCACTTATCGTTCCGGAGGATATGCAGAGTGGCTCAGATCTCGATGAT
GACAAGGATTACCATTTCCTGTCACTGCTGCTAAACTTAGTAAACACGTTTCTGTACATG
GTTAACACATACATCATCGTTCCAACTGCTGATGACTATTCAGTGAGCCTCGGAGCTGCA
GCGACTGTTTGCGGTGTGATTATCGGATCAATGGCAGTCGCCCAAATCTTCTCCTCAGTA
TATTTCAGTGCCTGGTCGAACAAATCGTACTTCAGACCCCTGGTATTTAGCAGCATTATG
CTATTTCTGGGGAACCTGTTGTATGCTTTGGCATATGATCTTAATTCCCTAACTGCTCTT
ATTGTCGGTCGACTACTGTGCGGTTTGGGTTCGGCCAGAGCCGTGAACCGCCGCTACATC
AGCGACTGTGTACCCCTGAAAAGCAGGATGCAGGCATCTGCTGGGTTTGTCAGTGCTAGT
GCTCTTGGAATGGCATGTGGTCCTGGTCTTGCCGGTCTGCTGCAGACAAAATTTAAGATC
TATGGGCTTACATTCAATCAGAACACCTTACCTGGGTGGGTCATGTGTGTTGCTTGGCTT
GCATATTTGTTCTGGTTGTGGATTTCATTCAAAGAGCCAGGCCATATTGCTTCAGAGAAT
TCAGTCAACACGCAGTCATCTGATTCTGGCCGTCCAGTAAGCGGTAATTTGGAGGATGGC
GTCAGAGAGCCTTTGCTCATAGATGCGAAGGCAGGACCGGATGACGATGTTGAGGACAAT
GACGACAACGATGACGACCCCGAGGAATCTCATAGACCCGCGACATCGCTTGCTGCAGCA
TACAGATTGCTGACACCATCTGTGAAGGTTCAGCTACTGATCTACTTTATGCTCAAGTTC
GCCATGGAAATCCTACTCTCGGAGTCAAGTGTTGTGACCACGTTCTATTTCAAGTGGACA
ACTAGTACCGTGGCAATCTTTCTAGCAGTTCTTGGCCTGACGGTTCTTCCCGTTAATGTC
ATCGTCGGGAGCTATGTCACCAACTTGTTCCAGGACAGGCAAATTCTGGTGGCCTCCGAG
ATCATGGTGTTGATCGGCATTGTCATGAGCTTCCGCTTCACCCCTCACTACTCCGTTCCC
CAATATGTCACGTCAGCTCTCATCACCTTCGTATTCGCCGAGGTGCTCGAAGGAGTGAAC
CTGTCCCTCCTCTCTCGCGTGATGTCGTCGAGGCTCTCCCGCGGGACCTACAACGGCGGG
CTGCTCTCGACGGAGGCCGGAACGCTGGCCCGCGTCGCCGCCGACATGACTATCACGGCG
GCGGGCAACCTGGGGCAGAGCCGCCTCCTGAACGCCACCCTCCTGCCGTCCCTGGTGATC
TGTTTAGCCTCTATCGTCGCGACGTTCTGCACTTACAACTCACTCTACTGA