Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

OQU85636
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:4:62460495:62463332:-1 gene:SORBI_3004G282800 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGCTTCTGCCTTGAGCTCAGCACAAGCAATGGCCGTCCTCACTGTCGCAAGCTTCTTC
GCACTCCTGTGCATCTCTCAACAAGCGCGAGCTGCGAACTACACGTTCATGAAGGACGCG
GTGTACGCGCCACGGATGGCCGACTACGACTACATCATCATCGGCGGCGGCACGGCGGGT
TGCCCGCTGGCGGCGACCCTGTCGGACCGCGCGCGCGTGCTGCTGCTGGAGCGCGGGGGA
TCCCCCTACGAGGACGCGCGCGTGCTGAGCATGGCGCACTTCTCGGACGTGCTGGCGGAC
ACGTCGGCGTCGTCGCCGTCGCAGCGGTTCGTGTCGGAGGACGGCGTGATCAACTCCCGC
CCGCGCGTGCTGGGCGGCGGCAGCTGCATCAACGCCGGGTTCTTCACGCGCGCCGGGGCA
GGCTACGTCAGGGCCGCCGGGTGGGATCCCAGGGAGGTGCGCGCGGCGTACCGGTGGGTG
GAGGACGTGGTCGCGTTCCGACCGGCGCTCGGCCCGTGGCAGACCGCCGTAAGGAGGGGA
CTCCTGGAGACCGGCGTGCTGCCGGACAACGGGTTCACGTATGACCACATCCCGGGGACG
AAAGTCGGCGGGTCCATCTTCGACGCCGACGGCACGCGGCACACGGCGGCGGACCTGCTC
CAGTACGCCAACCAGGACGGCATCGACCTGTATCTCCGGGCGAGAGTGTCCAGGATCTTG
TTCCGTTACAAAGGAACGAAGCCGGTGGCGGAAGGCGTGGTGTACCATGACTCGCGCGGC
AACGCGCACACGGCGTACCTGAGCCCGGGCGCCGCCAGCGAGGTGATCCTGTCGGCGGGG
GCGCTGGGCAGCCCGCAGCAGCTGATGCTGAGTGGCATCGGCCCGGCGGACCACCTCCGC
TCGCTGGGCATCGACGTCGTCCTCGACCTGCCGGGCGTCGGGCAGGGCATGTCCGACAAC
CCCATGAACGCCATCTACGTGCCGTCGCCGTCGCCGGTGGAGGTGTCGCTAATCCAGGTG
GTGGGCATCACCCAGTTCGGCAGCTACATCGAGGGCGCCAGCGGGGCCAACTGGAACAGC
CACCCGTCGGGCACGCAGACGCAGCCTCCTCGGAACCTCGGCATGTTCTCTCCGCAGACG
GGGCAGCTGGCGACGGTGCCGCCGAAGCAGCGGACGCCGGAGGCCATCGCGCGCGCCGTG
GAGGCCATGAGCCAGGTCCCCGACGCGGCGCTCCGTGGCGGGTTCATCCTGGAGAAAGTG
CTGGGACCGCAGTCCACGGGCCACCTGGTGCTCCGCAACCTGAACCCGGACGACAACCCG
TCGGTGCGGTTCAACTACTTCGCGCACCCGGACGACCTCCGCCGCTGCGTGGCCGGCATC
TCCGCCATCGAGCGCGTGATCCGCTCCAGGGCCTTCTCGCGCTTCACCTACCCCAACTTC
GCGTTCCCGGCCGCGCTCAACGTCACGGCCGAGTTCCCCGTCAACACGCTGTACCGGCGC
GGCGGCGGCGACCCCAGGGCGCTGGAGCAGTTCTGCAGGGACACCGTCATGACCATCTGG
CACTACCACGGCGGCTGCCAGGTCGGCCGCGTCGTCGACCGCAACTACAAGGTGCTCGGC
GTCGAGGCACTCCGCGTCATCGACGGCTCCACTTTCAACGCCTCGCCGGGGACCAACCCG
CAGGCCACCGTCATGATGCTCGGCAGGTACATGGGCGTGAAGCTCCTGAAAGAGAGGATG
CTGCTGGAACCATGA

Peptide Sequence

PEP ID

OQU85636
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:4:62460495:62463332:-1 gene:SORBI_3004G282800 transcript:OQU85636 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MASALSSAQAMAVLTVASFFALLCISQQARAANYTFMKDAVYAPRMADYDYIIIGGGTAG
CPLAATLSDRARVLLLERGGSPYEDARVLSMAHFSDVLADTSASSPSQRFVSEDGVINSR
PRVLGGGSCINAGFFTRAGAGYVRAAGWDPREVRAAYRWVEDVVAFRPALGPWQTAVRRG
LLETGVLPDNGFTYDHIPGTKVGGSIFDADGTRHTAADLLQYANQDGIDLYLRARVSRIL
FRYKGTKPVAEGVVYHDSRGNAHTAYLSPGAASEVILSAGALGSPQQLMLSGIGPADHLR
SLGIDVVLDLPGVGQGMSDNPMNAIYVPSPSPVEVSLIQVVGITQFGSYIEGASGANWNS
HPSGTQTQPPRNLGMFSPQTGQLATVPPKQRTPEAIARAVEAMSQVPDAALRGGFILEKV
LGPQSTGHLVLRNLNPDDNPSVRFNYFAHPDDLRRCVAGISAIERVIRSRAFSRFTYPNF
AFPAALNVTAEFPVNTLYRRGGGDPRALEQFCRDTVMTIWHYHGGCQVGRVVDRNYKVLG
VEALRVIDGSTFNASPGTNPQATVMMLGRYMGVKLLKERMLLEP

Transcript Sequence

Transcript ID

OQU85636
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:4:62460495:62463332:-1 gene:SORBI_3004G282800 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

CAAACTCGAAATCCATCAGCTTCCTTCCTGGCTATCCAATGGCTTCTGCCTTGAGCTCAG
CACAAGCAATGGCCGTCCTCACTGTCGCAAGCTTCTTCGCACTCCTGTGCATCTCTCAAC
AAGCGCGAGCTGCGAACTACACGTTCATGAAGGACGCGGTGTACGCGCCACGGATGGCCG
ACTACGACTACATCATCATCGGCGGCGGCACGGCGGGTTGCCCGCTGGCGGCGACCCTGT
CGGACCGCGCGCGCGTGCTGCTGCTGGAGCGCGGGGGATCCCCCTACGAGGACGCGCGCG
TGCTGAGCATGGCGCACTTCTCGGACGTGCTGGCGGACACGTCGGCGTCGTCGCCGTCGC
AGCGGTTCGTGTCGGAGGACGGCGTGATCAACTCCCGCCCGCGCGTGCTGGGCGGCGGCA
GCTGCATCAACGCCGGGTTCTTCACGCGCGCCGGGGCAGGCTACGTCAGGGCCGCCGGGT
GGGATCCCAGGGAGGTGCGCGCGGCGTACCGGTGGGTGGAGGACGTGGTCGCGTTCCGAC
CGGCGCTCGGCCCGTGGCAGACCGCCGTAAGGAGGGGACTCCTGGAGACCGGCGTGCTGC
CGGACAACGGGTTCACGTATGACCACATCCCGGGGACGAAAGTCGGCGGGTCCATCTTCG
ACGCCGACGGCACGCGGCACACGGCGGCGGACCTGCTCCAGTACGCCAACCAGGACGGCA
TCGACCTGTATCTCCGGGCGAGAGTGTCCAGGATCTTGTTCCGTTACAAAGGAACGAAGC
CGGTGGCGGAAGGCGTGGTGTACCATGACTCGCGCGGCAACGCGCACACGGCGTACCTGA
GCCCGGGCGCCGCCAGCGAGGTGATCCTGTCGGCGGGGGCGCTGGGCAGCCCGCAGCAGC
TGATGCTGAGTGGCATCGGCCCGGCGGACCACCTCCGCTCGCTGGGCATCGACGTCGTCC
TCGACCTGCCGGGCGTCGGGCAGGGCATGTCCGACAACCCCATGAACGCCATCTACGTGC
CGTCGCCGTCGCCGGTGGAGGTGTCGCTAATCCAGGTGGTGGGCATCACCCAGTTCGGCA
GCTACATCGAGGGCGCCAGCGGGGCCAACTGGAACAGCCACCCGTCGGGCACGCAGACGC
AGCCTCCTCGGAACCTCGGCATGTTCTCTCCGCAGACGGGGCAGCTGGCGACGGTGCCGC
CGAAGCAGCGGACGCCGGAGGCCATCGCGCGCGCCGTGGAGGCCATGAGCCAGGTCCCCG
ACGCGGCGCTCCGTGGCGGGTTCATCCTGGAGAAAGTGCTGGGACCGCAGTCCACGGGCC
ACCTGGTGCTCCGCAACCTGAACCCGGACGACAACCCGTCGGTGCGGTTCAACTACTTCG
CGCACCCGGACGACCTCCGCCGCTGCGTGGCCGGCATCTCCGCCATCGAGCGCGTGATCC
GCTCCAGGGCCTTCTCGCGCTTCACCTACCCCAACTTCGCGTTCCCGGCCGCGCTCAACG
TCACGGCCGAGTTCCCCGTCAACACGCTGTACCGGCGCGGCGGCGGCGACCCCAGGGCGC
TGGAGCAGTTCTGCAGGGACACCGTCATGACCATCTGGCACTACCACGGCGGCTGCCAGG
TCGGCCGCGTCGTCGACCGCAACTACAAGGTGCTCGGCGTCGAGGCACTCCGCGTCATCG
ACGGCTCCACTTTCAACGCCTCGCCGGGGACCAACCCGCAGGCCACCGTCATGATGCTCG
GCAGGTACATGGGCGTGAAGCTCCTGAAAGAGAGGATGCTGCTGGAACCATGAGGCAGGA
AAAAAAAAGTCCAGTCTGATATCTCTGAAAGCGCGCGTGTGCTGCCTGCGTTTAACCTTC
AGTGTTCTTTTAGTGACGAACGAACAAGCTATTGGAGATGCTAATTGTAATGGATGAATT
CCACACCAATTAATTTGCACAGAATGTGGATGGTATTTATCCCGTCCATTTCATGTCTAA
AAACTCTATTGCGTCGAGTCCTAGATTTCTGGCCCGTTGTCTTCAGACACGCATTTTTCT
TCCAAACACGTCTTCATGGACGGTGGCCGCTTGTCAGTGGAACAAGATGACAGCCTTTGT
TCTTAATCTTGAGCTAGAAACTCATCAGCTTTATCGGCGGAAAAAGTCTACATCACCCCC
TGAACTATGGGGTGGTGTCTACTTTACCCCCGGAACTATAAAACAGTCTAATTTACCCCC
TGAACTCTCCAAAACCGTTCAAATCACCCCTGGGCGGTTTTTTATGGCGGTTTTGCTACA
GTACCGTGGTTTTGACTTTTTCTTTTTCACTATTTGTTTTCATATAATCTTTGAAAAATC
ATAATAAATCACAGAAAAAT