Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

OQU85594
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:4:62029438:62032250:1 gene:SORBI_3004G276900 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGTCATTGAATTCTGATGAACCTAAGAGTCGTGCCCGGACAGACTTTTTGCTCAACAAT
GAAGCAGAGGTTCAGAAGTTTTGGGATGAGAACAAGGCTTTTGAGGCTGATCCTGGCAAT
GAGTCTCCAAGCCCTGGGGAAAAATTCTTTGGGAACTTTCCATACCCTTACATGAATGGC
TTGCTGCATCTGAGCCATGCCTTCTCGTTGTCCAAGCTTGAGTTCGGTGCTGCATACCAC
AGGCTTCGTGGCTCCAATGTCCTTTTTCCCTTTGCTTTCCACTGCACTGGAATGCCCATC
AAGGCCTCAGCTGATAAACTTGCTAGGGAAATCCAACAATATGGATATCCTCCAGTGTTT
CCCGCGGCTGAAGGTTCTAGTGCCGCAGTGGCAGATACTATCCAGGCTGACCAGGCTGAT
GTTGTTGCCCCAGATATGTTTAAGGGGAAGAAGTCCAAGGCTACTGCAAAGGCTGGCGCA
CACAAGTACCAGTGGGAGATCATGAAGAGCTTTGGTCTAGATGATGAAGAAATTGCCAGG
TTTCAAGATCCGTATCACTGGTTGACTCGCTTCCCTCCATTGGCAAAGGAGCAGATGAGG
AAGCTGAAGAAATTGGGCATTGTTGTTAAAGACATGAGGTACACAATCTACTCTCCATTG
GATGGCCAACCTTGTGCCGATCATGATAGAGCAACAGGTGAAGGTGTGCAACCACAAGAA
TACATCTTGATTAAAATGGAGGTGATATCACCTTTTCCTCCCAAGCTGAAGGCATTGGAA
GGGAGGAAGGTATATTTGGCAGCTGCTACACTAAGACCTGAGACGATGTATGGACAGACA
AATTGCTGGGTGCTTCCTGATGGAATGTATGGTGCTTTTGAGATCAACGACACTGATGTC
TTCATCCTTACAATAATCCACATTCCTGAATTTGGAGACAAGTCAGAAGAGAAGGTTTGC
CATGATCGTAAGATTAAAAGCCAGAACGACAAGGAGAAGCTTGCTGAAGCAAAAAGAATG
ACATATCTGAAGGGATTTACTGATGGAACAATGATTGCTGGTGAGTTCAGAGGTAAAAGG
TTTCAAGAAGCGAAGCTGCTGATTAAAAGCAAGCCTTTGGAAGAAGGCACAGCCGTGTTG
TATAGTGAGCCGGAGGAGAAGGTCATGTCTAGGTCTGGTGATGAATGTGTTGTTGCCCTC
ACTGATCAGTGGTACATAATTTATGGTGAGGCTGAATGGAAGCAGAAGGCAGTCAGATGT
TTGGCCCGCATGAATACATTCTCAACTGACACCCGTAATGGTTTTGAACACACATTGGAC
TGGCTGAACCAGTGGGCTTGTTCGCGTTCTTTTGGCCTTGTTGCACATCTTTTGCAAAAT
GGTAATATGTATGGGAAAGAAATATCTTCAGTAAGGCCAGAAGAAATGACAGATGAAGTC
TGGGATTTTGTGTTTTGTGATGGCCCAGCACCAAAAAGTGACATCCCTGCTGCTCTGTTG
AACAAAATGAAGCAGGAATTTGAGTATTGGTTTCCATTTGATATCCGTGTGTCTGGTAAA
GACCTTATTCAAAACCATCTGACATTCTGCATATACAATCATACAGCACTTCTTCCTGAG
CACCATTGGCCTCCTGGTTTCCGCTGCAATGGGCATCTTATGCTTAATTCTGAGAAAATG
TCCGAGTCCACAGGAAATTTCCTAACTCTTGAAGATGCCATAAAAAAGTACTCTTCTGAT
GCCACTAGATATGCCCTTGTTGATGCTGGCGATGGTACGGATGATGCTAACTTTAAAACT
GAAACTGCAAATTCTGGTGTTATGAGGCTTACAAAAGAAATTTCATGGATGGAAGAGGTT
ACAGATGCTGAATCTAAATTAAGAGCTGGGCCGCCCACTACATTTGCTGACCAAGATCGT
GAAGAAAGAAGGCATAGTAATAAAATCTGGCTGGCCAGACGCAGACACCCCCCAGATCCG
ACTCTGAAAATTGCAAATGAATACTTGCAGAATTCCATAGTTTCAATGAGGAAGCTGCTT
CAGGAGCGAGAGTCTGGTTCCAAGAAGCCTAAGAAAGGAGCTGCACCAGACCTCCATCCG
AGGAAAAGAAGATGA

Peptide Sequence

PEP ID

OQU85594
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:4:62029438:62032250:1 gene:SORBI_3004G276900 transcript:OQU85594 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MSLNSDEPKSRARTDFLLNNEAEVQKFWDENKAFEADPGNESPSPGEKFFGNFPYPYMNG
LLHLSHAFSLSKLEFGAAYHRLRGSNVLFPFAFHCTGMPIKASADKLAREIQQYGYPPVF
PAAEGSSAAVADTIQADQADVVAPDMFKGKKSKATAKAGAHKYQWEIMKSFGLDDEEIAR
FQDPYHWLTRFPPLAKEQMRKLKKLGIVVKDMRYTIYSPLDGQPCADHDRATGEGVQPQE
YILIKMEVISPFPPKLKALEGRKVYLAAATLRPETMYGQTNCWVLPDGMYGAFEINDTDV
FILTIIHIPEFGDKSEEKVCHDRKIKSQNDKEKLAEAKRMTYLKGFTDGTMIAGEFRGKR
FQEAKLLIKSKPLEEGTAVLYSEPEEKVMSRSGDECVVALTDQWYIIYGEAEWKQKAVRC
LARMNTFSTDTRNGFEHTLDWLNQWACSRSFGLVAHLLQNGNMYGKEISSVRPEEMTDEV
WDFVFCDGPAPKSDIPAALLNKMKQEFEYWFPFDIRVSGKDLIQNHLTFCIYNHTALLPE
HHWPPGFRCNGHLMLNSEKMSESTGNFLTLEDAIKKYSSDATRYALVDAGDGTDDANFKT
ETANSGVMRLTKEISWMEEVTDAESKLRAGPPTTFADQDREERRHSNKIWLARRRHPPDP
TLKIANEYLQNSIVSMRKLLQERESGSKKPKKGAAPDLHPRKRR

Transcript Sequence

Transcript ID

OQU85594
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:4:62029438:62032250:1 gene:SORBI_3004G276900 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGTCATTGAATTCTGATGAACCTAAGAGTCGTGCCCGGACAGACTTTTTGCTCAACAAT
GAAGCAGAGGTTCAGAAGTTTTGGGATGAGAACAAGGCTTTTGAGGCTGATCCTGGCAAT
GAGTCTCCAAGCCCTGGGGAAAAATTCTTTGGGAACTTTCCATACCCTTACATGAATGGC
TTGCTGCATCTGAGCCATGCCTTCTCGTTGTCCAAGCTTGAGTTCGGTGCTGCATACCAC
AGGCTTCGTGGCTCCAATGTCCTTTTTCCCTTTGCTTTCCACTGCACTGGAATGCCCATC
AAGGCCTCAGCTGATAAACTTGCTAGGGAAATCCAACAATATGGATATCCTCCAGTGTTT
CCCGCGGCTGAAGGTTCTAGTGCCGCAGTGGCAGATACTATCCAGGCTGACCAGGCTGAT
GTTGTTGCCCCAGATATGTTTAAGGGGAAGAAGTCCAAGGCTACTGCAAAGGCTGGCGCA
CACAAGTACCAGTGGGAGATCATGAAGAGCTTTGGTCTAGATGATGAAGAAATTGCCAGG
TTTCAAGATCCGTATCACTGGTTGACTCGCTTCCCTCCATTGGCAAAGGAGCAGATGAGG
AAGCTGAAGAAATTGGGCATTGTTGTTAAAGACATGAGGTACACAATCTACTCTCCATTG
GATGGCCAACCTTGTGCCGATCATGATAGAGCAACAGGTGAAGGTGTGCAACCACAAGAA
TACATCTTGATTAAAATGGAGGTGATATCACCTTTTCCTCCCAAGCTGAAGGCATTGGAA
GGGAGGAAGGTATATTTGGCAGCTGCTACACTAAGACCTGAGACGATGTATGGACAGACA
AATTGCTGGGTGCTTCCTGATGGAATGTATGGTGCTTTTGAGATCAACGACACTGATGTC
TTCATCCTTACAATAATCCACATTCCTGAATTTGGAGACAAGTCAGAAGAGAAGGTTTGC
CATGATCGTAAGATTAAAAGCCAGAACGACAAGGAGAAGCTTGCTGAAGCAAAAAGAATG
ACATATCTGAAGGGATTTACTGATGGAACAATGATTGCTGGTGAGTTCAGAGGTAAAAGG
TTTCAAGAAGCGAAGCTGCTGATTAAAAGCAAGCCTTTGGAAGAAGGCACAGCCGTGTTG
TATAGTGAGCCGGAGGAGAAGGTCATGTCTAGGTCTGGTGATGAATGTGTTGTTGCCCTC
ACTGATCAGTGGTACATAATTTATGGTGAGGCTGAATGGAAGCAGAAGGCAGTCAGATGT
TTGGCCCGCATGAATACATTCTCAACTGACACCCGTAATGGTTTTGAACACACATTGGAC
TGGCTGAACCAGTGGGCTTGTTCGCGTTCTTTTGGCCTTGTTGCACATCTTTTGCAAAAT
GGTAATATGTATGGGAAAGAAATATCTTCAGTAAGGCCAGAAGAAATGACAGATGAAGTC
TGGGATTTTGTGTTTTGTGATGGCCCAGCACCAAAAAGTGACATCCCTGCTGCTCTGTTG
AACAAAATGAAGCAGGAATTTGAGTATTGGTTTCCATTTGATATCCGTGTGTCTGGTAAA
GACCTTATTCAAAACCATCTGACATTCTGCATATACAATCATACAGCACTTCTTCCTGAG
CACCATTGGCCTCCTGGTTTCCGCTGCAATGGGCATCTTATGCTTAATTCTGAGAAAATG
TCCGAGTCCACAGGAAATTTCCTAACTCTTGAAGATGCCATAAAAAAGTACTCTTCTGAT
GCCACTAGATATGCCCTTGTTGATGCTGGCGATGGTACGGATGATGCTAACTTTAAAACT
GAAACTGCAAATTCTGGTGTTATGAGGCTTACAAAAGAAATTTCATGGATGGAAGAGGTT
ACAGATGCTGAATCTAAATTAAGAGCTGGGCCGCCCACTACATTTGCTGACCAAGATCGT
GAAGAAAGAAGGCATAGTAATAAAATCTGGCTGGCCAGACGCAGACACCCCCCAGATCCG
ACTCTGAAAATTGCAAATGAATACTTGCAGAATTCCATAGTTTCAATGAGGAAGCTGCTT
CAGGAGCGAGAGTCTGGTTCCAAGAAGCCTAAGAAAGGAGCTGCACCAGACCTCCATCCG
AGGAAAAGAAGATGA