Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Sorghum bicolor

CDS Sequence

CDS ID	OQU85516
CDS Infomation	cds chromosome:Sorghum_bicolor_NCBIv3:4:60517832:60532635:1 gene:SORBI_3004G260100 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence	ATGGCGGGGAAATCCAAGGGTGGGAAGAACAAAGGGAAGGCGCAGGGCGCGGGTCAGCCC ACCTCTGCTGAGCCAGAGGTGCTGGCGACTGACGGAGCCGAAGTGGTTAATCCAGAGAAT GGGGAAGTGCACGAAACCCCTGCCACGGAGGATGGTGTGGCAGATGTGGAGAAACGAGAC GGGGATGCCCCGGAGGCTGTGCAGCCTGCAAGAAAGCCAGCTGAAGGAGAGCTTCATCTC TACCCTGTTCCTGTCAGGACACAATCAGGTGAAAAGCTCGAGCTGCAGCTAAGCCCAGGA GATTCTGTTATTGACGTTAAGCAATTCCTCTTGGATGCTCCTGAAACATGCTTCTATACA TGCTATGATTTGATATTGCATACTGAAGATGGGTCAGCTCATCAGTTAGAAGACTACAAT GAAATATCTGAAATAGCAGATATAACTTCTGGTGGATGTTCACTGGAGATGGTTGCTGCA ATATATGATGAGAGGTCTATTAGGTCACATCTCCGACGTGTGAGGGAGCTACTATCCCTG TCTAGTCTTCATGTTTCCCTATCAACATCCTTAGCTCTGCAGCATGAGTCTGCTCAGGGA AAATCTGCAGGTTCTGAAAAAAGCCCTATTCAGGAGCTTGATGGTTTAAATTTTATGGAG GATAGTGCTGGTGCTCTCACTAATTTATTGGCTTCTGCACCAACAGAGATAAAATGTGTT GAAAGCATAGTTTTTTCGTCGTTCAATCCTCCGCCGAGTTATCGGAGGTTACATGGAGAT CTCATCTATATTGATGTTGCCACATTAGAAGGAAACAAATACTGCATTACCGGAAGCTCC AAATCTTTCTATGTTAACAGTAGCAATGGAAGTATATTTGACTCGAGACCTACAAAACAA GCACTGGAGGCCAGCACTCTTGTAGGTCTACTACAGAAGATCAGTGCCAAATTTAAGAAA GGTTTTCGTGAAGTCTTGGATCGCAGGGCATCGGCTCATCCATTTGAGAATGTTCAGTCT TTGCTTCCAGTGACTTCTTGGTTAGGAGCTTATCCTGTGCCAGCACATAGAAGGGATGCA GCCAGGGCTGAAGACTCTGTTGTGTTGTCATATGGCACTGAATTAATTGGCATGCAGAGA GACTGGAATGAAGAATTGCAGTCCTGCCGGGAGTTTCCTCATGGCAATCCTCAAGAAAGG ATATTGCGTGGCAGAGCGCTCTACAAAGTAACATGTGATTTTGTTGATGCTGCTGTAAAA GGTGCCGTTGGTGTCATTAATAGATGTATACCCCCAATAAATCCAACTGACCCAGAATGT TTTCATATGTATGTTCACAACAATATTTTCTTTAGTTTTGCTGTCGACTCCGACTATGAA CACATTTCAAAGGACCACAAGCCAGATTGCCAAAATGGCTCCAGCAGAAGCACCAAGGTT TCCTCCCCAGATGTGATCACTAAGCCAGATACAAACCATACTGAATCTGCTGAGGTAGCT GACTCAAAATCCGAAGAGGCACAACTTGCAGATAGTGAGCAGGCGACATATGCTTCTGCA AACAATGACTTAAAAGGAACTAAGGCTTATCAAGAAGCTGATGTTTCTGGCCTTTACAAT CTTGCGATGGCAATAATTGATTACAGAGGTCACAGGGTTGTAGCTCAGAGCATCATACCT GGTATTCTTCAAGGAGACAAGTCAGATTCCCTTCTGTATGGCTCTGTTGATAATGGCAAG AAGATATCTTGGAATGAAGCCTTCCATTCAAAGGTAGTTGAGGCTGCAAAGCGGCTCCAT TTGAAGGAGCATGTGGTTTTGGATGGTTCTGGTAATCCTGTAAAATTAGCTGCTACAGTC GAATGCAAGGGCATTGTTGGGAGTGATGACAGGCATTACATTTTGGATCTGATGAGAGTG ACTCCGCGAGATTCTAACTACATTGGACAAGAGCACCGCTTCTGCGTGTTGAGACCTGAA CTTATAGCATCATTTGTTGAGGCTGAATCCATTAAACAATCGTTTAAGCAGAAGGTTCCA GATGCTCCAGTTGCAAGTGCTTCTGATGCTGAGGCTACCTCTGTTGAAGGAGATGACAAG TCTGAAGAAAGCTCTGTTCATACACACGAGGAAAATGACAACTCAACCTCTGAGATTCTT TTCAACCCGAATGTGTTTACGGAGTACAAGCTTGCTGGCAGTCCAGAGGAAATCACTGCT GATGAAGTGTTGGTAAAAAGGGCTGGCACTTATCTTATTGATATAGTGATCCCAAAGTTT GTTCAGGATCTTTGCTCCCTTGATATCTCCCCTATGGATGGACAGACTTTAACTGATGCC TTGCATCTCCATGGGATAAATATTAGGTACCTGGGCAAGATTGCAGGCATGGTCAAACAT TTACCACACTTACGGGATTTGTTTTCTGCTGAGATAATAGTTAGATCTGCAAAGCATGTT ATCAAGGATATACTGAGGCAAAGTTTGGATCATGATATTGGGCCAGCTATTGCTCATTTC TTAAACTGTTTCGTGGGGAAAGTTTTAGGTGCTTCCACAAAGGGTAGTCTTAGCAATGCG CAGTCAAAAACTCTGAAGGGTCATGAAAATAGCCAAATTCAGAAGTCCTCTAAAGGCCAT AAACTGAGCAATGCTGCTGCTTCAAGAAAAAGCTTATCAGCTTATTCCCATCTAACCTCC GATGGAATTTGGCTTAGCATTAAGGAATTTGCAAAATCAAAATATCAGTTTGAAGTGCCA GATGATGCAAGGCTTTCAGCCAAAAGGGTAGCTGTTCTCCGCAATCTTTGCCAAAAGGTA GGAATAACAATTGCTGCACGCAAATATGATCTGGATGCTTCGACTCCATTTGAAGCCTCA GATATGTTAAATCTCCAACCAGTTGTCAAGCATTCTGTTCCAACCTGTACAGACGCAAAG AATCTTATGGAAGCAGGGAAAGTCAGGATGGCTGAGGGAACATTGAATGAGGCATATGCA TTGTTTTCAGAAGCCTTTTCACTGCTTCAACAGATAACTGGACCCATGCACAAGGATGCT GCAAATTGTTGCCGGTACCTTGCTATGGTTTTGTACCATGCTGGTGATACAGCCGGAGCA ATTGTGCAGCAACATAGGGAACTCATTATAAATGAGAGATGTCTTGGTCTTGATCATCCG GACACAGCCCACAGTTATGGTAACATGGCGTTATTCTATCATGGGCTCAATCAAACTGAA CTGGCACTGCGGCACATGTCCCGCACACTGTTGTTGCTAAGTTTGGCGTCAGGACCTGAT CACCCAGATGTTGCAGCAACTCTCATAAATGTTGCAATGATGTACCAGGATGCCAGCAAT ATGAATACTGCTCTTAGGTATCTTCAAGAAGCCCTTATGAAGAATGAGCGACTTCTTGGC CCTGACCATGTTCAAACAGCTGTGTGCTATCATGCTCTTGCCATTGCATTCAGCTGTATG AGCTTATATAAGCTTTCAATTCAGCATGAAAAGAAGACTTATGATATACTGGTAAAACAA TTAGGGGAAAATGACTCACGGACTAAAGACTCAGAAAATTGGTTGAGTACTTTTAAGCTT CGAGAAGAGCAGGTCAACGCCCAGAAGCAGAAGGGCCAGGGAGCTAATGCATCCGATAAC GCTGTTAAATTCTTGAAGGCAAACCCTGCATTTTTACAAGCAATGAAGGCTGCTGCGATA CAATCAGGTGATGGGTCAGCAAATGTCAACAGGTCGCTCAATGCGGCAGTAGTTGGAGAA GGTGTACCACGACTGAGAGGAGTGGATGAGCGAGCTGCTCGAGCGACTGCAGAAGCTCGG AAGAAAGCTGCTGCAAGAGGTCTTAATGTCCGTAATGGCCCTGCGGCAAACCATGCGTCT GATGAACTAGCTCAGATTCTCAAACTCATCAACGCTGCTTCAGGTTCTTCCACTTCTGCC TCAGCCAAAACTGAGGAATCTGCCTCTGAAGGGCAGGCAACAAATGGATCTGTTCAAAAC GGAACTGCAACTGAAGCGATAGCTGTGGATACCAATGGCCCATCTGCATCTGCTAAGTCC ACTGTTAACACACCAGTTGGATTGGGGACAACATTGGAGTTGAAGAAGCAGAAATCAAAG CAAAAGATTGCCACGTTCACGTGGTGGAAGAGTTCATTTATTTTTGTTGGAGGTTCTTAG

Peptide Sequence

PEP ID	OQU85516
PEP Infomation	pep chromosome:Sorghum_bicolor_NCBIv3:4:60517832:60532635:1 gene:SORBI_3004G260100 transcript:OQU85516 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence	MAGKSKGGKNKGKAQGAGQPTSAEPEVLATDGAEVVNPENGEVHETPATEDGVADVEKRD GDAPEAVQPARKPAEGELHLYPVPVRTQSGEKLELQLSPGDSVIDVKQFLLDAPETCFYT CYDLILHTEDGSAHQLEDYNEISEIADITSGGCSLEMVAAIYDERSIRSHLRRVRELLSL SSLHVSLSTSLALQHESAQGKSAGSEKSPIQELDGLNFMEDSAGALTNLLASAPTEIKCV ESIVFSSFNPPPSYRRLHGDLIYIDVATLEGNKYCITGSSKSFYVNSSNGSIFDSRPTKQ ALEASTLVGLLQKISAKFKKGFREVLDRRASAHPFENVQSLLPVTSWLGAYPVPAHRRDA ARAEDSVVLSYGTELIGMQRDWNEELQSCREFPHGNPQERILRGRALYKVTCDFVDAAVK GAVGVINRCIPPINPTDPECFHMYVHNNIFFSFAVDSDYEHISKDHKPDCQNGSSRSTKV SSPDVITKPDTNHTESAEVADSKSEEAQLADSEQATYASANNDLKGTKAYQEADVSGLYN LAMAIIDYRGHRVVAQSIIPGILQGDKSDSLLYGSVDNGKKISWNEAFHSKVVEAAKRLH LKEHVVLDGSGNPVKLAATVECKGIVGSDDRHYILDLMRVTPRDSNYIGQEHRFCVLRPE LIASFVEAESIKQSFKQKVPDAPVASASDAEATSVEGDDKSEESSVHTHEENDNSTSEIL FNPNVFTEYKLAGSPEEITADEVLVKRAGTYLIDIVIPKFVQDLCSLDISPMDGQTLTDA LHLHGINIRYLGKIAGMVKHLPHLRDLFSAEIIVRSAKHVIKDILRQSLDHDIGPAIAHF LNCFVGKVLGASTKGSLSNAQSKTLKGHENSQIQKSSKGHKLSNAAASRKSLSAYSHLTS DGIWLSIKEFAKSKYQFEVPDDARLSAKRVAVLRNLCQKVGITIAARKYDLDASTPFEAS DMLNLQPVVKHSVPTCTDAKNLMEAGKVRMAEGTLNEAYALFSEAFSLLQQITGPMHKDA ANCCRYLAMVLYHAGDTAGAIVQQHRELIINERCLGLDHPDTAHSYGNMALFYHGLNQTE LALRHMSRTLLLLSLASGPDHPDVAATLINVAMMYQDASNMNTALRYLQEALMKNERLLG PDHVQTAVCYHALAIAFSCMSLYKLSIQHEKKTYDILVKQLGENDSRTKDSENWLSTFKL REEQVNAQKQKGQGANASDNAVKFLKANPAFLQAMKAAAIQSGDGSANVNRSLNAAVVGE GVPRLRGVDERAARATAEARKKAAARGLNVRNGPAANHASDELAQILKLINAASGSSTSA SAKTEESASEGQATNGSVQNGTATEAIAVDTNGPSASAKSTVNTPVGLGTTLELKKQKSK QKIATFTWWKSSFIFVGGS

Transcript Sequence

Transcript ID	OQU85516
Transcript Infomation	cdna chromosome:Sorghum_bicolor_NCBIv3:4:60517832:60532635:1 gene:SORBI_3004G260100 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence	AAATCAGCAACGCGAGCGCCTCACCCAGACTCCCAGAGGCCGCACCGCACGAGAGTAGAG ATTAGGAGGGTTTGCCATCCGTATAAAAGGAGCGGCCGGCGAGGGCTGCCGCGCCTCCCT CCTCCGCTTTACCAAAACAGCCCCTCTCGCCCAATCATTCCCTCTGTGCCTCGTCCTCGC GCCGCCTCTCATCCTCCGGAAGCCGAAGCTTCCGCGCCGGCGGCGGCGGCGGTAGGTCAC TCTCACTCCCCAACCAAATCCCTTTTCTGTACATACTAATTCGATCGAATCCATATCGCT CGGGTGCCCCGCTGAGGTGGAGGGGTCTCGATTGGTGAGAGGGTTTAGGGTTTTGATCCC ACAGCAGATCGTGCGCTCGGCTGCTAGTTTGTTCCGTTGTGGTTTCATAGAACGGGTGAT GTTTCTCAGCGGCTTTAGATAGCCGTGGTGTGTGCTGTCCTGTGAATTTTGTATTTTTTT TGTTTGGCCTAATTAGATTTGTTGGTGTCGGTTTCTGGTCCGAGCAGGAATATGGCGGGG AAATCCAAGGGTGGGAAGAACAAAGGGAAGGCGCAGGGCGCGGGTCAGCCCACCTCTGCT GAGCCAGAGGTGCTGGCGACTGACGGAGCCGAAGTGGTTAATCCAGAGAATGGGGAAGTG CACGAAACCCCTGCCACGGAGGATGGTGTGGCAGATGTGGAGAAACGAGACGGGGATGCC CCGGAGGCTGTGCAGCCTGCAAGAAAGCCAGCTGAAGGAGAGCTTCATCTCTACCCTGTT CCTGTCAGGACACAATCAGGTGAAAAGCTCGAGCTGCAGCTAAGCCCAGGAGATTCTGTT ATTGACGTTAAGCAATTCCTCTTGGATGCTCCTGAAACATGCTTCTATACATGCTATGAT TTGATATTGCATACTGAAGATGGGTCAGCTCATCAGTTAGAAGACTACAATGAAATATCT GAAATAGCAGATATAACTTCTGGTGGATGTTCACTGGAGATGGTTGCTGCAATATATGAT GAGAGGTCTATTAGGTCACATCTCCGACGTGTGAGGGAGCTACTATCCCTGTCTAGTCTT CATGTTTCCCTATCAACATCCTTAGCTCTGCAGCATGAGTCTGCTCAGGGAAAATCTGCA GGTTCTGAAAAAAGCCCTATTCAGGAGCTTGATGGTTTAAATTTTATGGAGGATAGTGCT GGTGCTCTCACTAATTTATTGGCTTCTGCACCAACAGAGATAAAATGTGTTGAAAGCATA GTTTTTTCGTCGTTCAATCCTCCGCCGAGTTATCGGAGGTTACATGGAGATCTCATCTAT ATTGATGTTGCCACATTAGAAGGAAACAAATACTGCATTACCGGAAGCTCCAAATCTTTC TATGTTAACAGTAGCAATGGAAGTATATTTGACTCGAGACCTACAAAACAAGCACTGGAG GCCAGCACTCTTGTAGGTCTACTACAGAAGATCAGTGCCAAATTTAAGAAAGGTTTTCGT GAAGTCTTGGATCGCAGGGCATCGGCTCATCCATTTGAGAATGTTCAGTCTTTGCTTCCA GTGACTTCTTGGTTAGGAGCTTATCCTGTGCCAGCACATAGAAGGGATGCAGCCAGGGCT GAAGACTCTGTTGTGTTGTCATATGGCACTGAATTAATTGGCATGCAGAGAGACTGGAAT GAAGAATTGCAGTCCTGCCGGGAGTTTCCTCATGGCAATCCTCAAGAAAGGATATTGCGT GGCAGAGCGCTCTACAAAGTAACATGTGATTTTGTTGATGCTGCTGTAAAAGGTGCCGTT GGTGTCATTAATAGATGTATACCCCCAATAAATCCAACTGACCCAGAATGTTTTCATATG TATGTTCACAACAATATTTTCTTTAGTTTTGCTGTCGACTCCGACTATGAACACATTTCA AAGGACCACAAGCCAGATTGCCAAAATGGCTCCAGCAGAAGCACCAAGGTTTCCTCCCCA GATGTGATCACTAAGCCAGATACAAACCATACTGAATCTGCTGAGGTAGCTGACTCAAAA TCCGAAGAGGCACAACTTGCAGATAGTGAGCAGGCGACATATGCTTCTGCAAACAATGAC TTAAAAGGAACTAAGGCTTATCAAGAAGCTGATGTTTCTGGCCTTTACAATCTTGCGATG GCAATAATTGATTACAGAGGTCACAGGGTTGTAGCTCAGAGCATCATACCTGGTATTCTT CAAGGAGACAAGTCAGATTCCCTTCTGTATGGCTCTGTTGATAATGGCAAGAAGATATCT TGGAATGAAGCCTTCCATTCAAAGGTAGTTGAGGCTGCAAAGCGGCTCCATTTGAAGGAG CATGTGGTTTTGGATGGTTCTGGTAATCCTGTAAAATTAGCTGCTACAGTCGAATGCAAG GGCATTGTTGGGAGTGATGACAGGCATTACATTTTGGATCTGATGAGAGTGACTCCGCGA GATTCTAACTACATTGGACAAGAGCACCGCTTCTGCGTGTTGAGACCTGAACTTATAGCA TCATTTGTTGAGGCTGAATCCATTAAACAATCGTTTAAGCAGAAGGTTCCAGATGCTCCA GTTGCAAGTGCTTCTGATGCTGAGGCTACCTCTGTTGAAGGAGATGACAAGTCTGAAGAA AGCTCTGTTCATACACACGAGGAAAATGACAACTCAACCTCTGAGATTCTTTTCAACCCG AATGTGTTTACGGAGTACAAGCTTGCTGGCAGTCCAGAGGAAATCACTGCTGATGAAGTG TTGGTAAAAAGGGCTGGCACTTATCTTATTGATATAGTGATCCCAAAGTTTGTTCAGGAT CTTTGCTCCCTTGATATCTCCCCTATGGATGGACAGACTTTAACTGATGCCTTGCATCTC CATGGGATAAATATTAGGTACCTGGGCAAGATTGCAGGCATGGTCAAACATTTACCACAC TTACGGGATTTGTTTTCTGCTGAGATAATAGTTAGATCTGCAAAGCATGTTATCAAGGAT ATACTGAGGCAAAGTTTGGATCATGATATTGGGCCAGCTATTGCTCATTTCTTAAACTGT TTCGTGGGGAAAGTTTTAGGTGCTTCCACAAAGGGTAGTCTTAGCAATGCGCAGTCAAAA ACTCTGAAGGGTCATGAAAATAGCCAAATTCAGAAGTCCTCTAAAGGCCATAAACTGAGC AATGCTGCTGCTTCAAGAAAAAGCTTATCAGCTTATTCCCATCTAACCTCCGATGGAATT TGGCTTAGCATTAAGGAATTTGCAAAATCAAAATATCAGTTTGAAGTGCCAGATGATGCA AGGCTTTCAGCCAAAAGGGTAGCTGTTCTCCGCAATCTTTGCCAAAAGGTAGGAATAACA ATTGCTGCACGCAAATATGATCTGGATGCTTCGACTCCATTTGAAGCCTCAGATATGTTA AATCTCCAACCAGTTGTCAAGCATTCTGTTCCAACCTGTACAGACGCAAAGAATCTTATG GAAGCAGGGAAAGTCAGGATGGCTGAGGGAACATTGAATGAGGCATATGCATTGTTTTCA GAAGCCTTTTCACTGCTTCAACAGATAACTGGACCCATGCACAAGGATGCTGCAAATTGT TGCCGGTACCTTGCTATGGTTTTGTACCATGCTGGTGATACAGCCGGAGCAATTGTGCAG CAACATAGGGAACTCATTATAAATGAGAGATGTCTTGGTCTTGATCATCCGGACACAGCC CACAGTTATGGTAACATGGCGTTATTCTATCATGGGCTCAATCAAACTGAACTGGCACTG CGGCACATGTCCCGCACACTGTTGTTGCTAAGTTTGGCGTCAGGACCTGATCACCCAGAT GTTGCAGCAACTCTCATAAATGTTGCAATGATGTACCAGGATGCCAGCAATATGAATACT GCTCTTAGGTATCTTCAAGAAGCCCTTATGAAGAATGAGCGACTTCTTGGCCCTGACCAT GTTCAAACAGCTGTGTGCTATCATGCTCTTGCCATTGCATTCAGCTGTATGAGCTTATAT AAGCTTTCAATTCAGCATGAAAAGAAGACTTATGATATACTGGTAAAACAATTAGGGGAA AATGACTCACGGACTAAAGACTCAGAAAATTGGTTGAGTACTTTTAAGCTTCGAGAAGAG CAGGTCAACGCCCAGAAGCAGAAGGGCCAGGGAGCTAATGCATCCGATAACGCTGTTAAA TTCTTGAAGGCAAACCCTGCATTTTTACAAGCAATGAAGGCTGCTGCGATACAATCAGGT GATGGGTCAGCAAATGTCAACAGGTCGCTCAATGCGGCAGTAGTTGGAGAAGGTGTACCA CGACTGAGAGGAGTGGATGAGCGAGCTGCTCGAGCGACTGCAGAAGCTCGGAAGAAAGCT GCTGCAAGAGGTCTTAATGTCCGTAATGGCCCTGCGGCAAACCATGCGTCTGATGAACTA GCTCAGATTCTCAAACTCATCAACGCTGCTTCAGGTTCTTCCACTTCTGCCTCAGCCAAA ACTGAGGAATCTGCCTCTGAAGGGCAGGCAACAAATGGATCTGTTCAAAACGGAACTGCA ACTGAAGCGATAGCTGTGGATACCAATGGCCCATCTGCATCTGCTAAGTCCACTGTTAAC ACACCAGTTGGATTGGGGACAACATTGGAGTTGAAGAAGCAGAAATCAAAGCAAAAGATT GCCACGTTCACGTGGTGGAAGAGTTCATTTATTTTTGTTGGAGGTTCTTAGGTGGGTTCA ATAATCATTACAAGAAAGAAGACCAGACCATTGTTTCGAATCATCATTGACAGACCACTG ATGAGATAATGGCTAATCCTTAAGCTAATAAATCTGTAGTCGGTACAGTTACCTGTTTAA AATTTTTGTGCAAGATTAGTATGCTAATTTGTTGCCCAACAAAGAAATATTACTCTTATT TCTGTTGAGCTTTTAGTGCTTCTGTTGGTGTCAGCAGAACTCTTCTGTTCGTGTGCGTGC AGGGTTTCTCCAGCTCCAATTTGTGACTGTTCGATTGTATTTTCATTTTAAGGAACCTAC TGTGTATGTGCAGTTGTGATGGCT