Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

OQU85494
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:4:60182294:60185644:-1 gene:SORBI_3004G255800 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGCTTCGAAGGCAATGCCTCAAGTTCTCCCAGAAATGCCAAGCATCCCAGGCCCGAAT
CAATGCTCTAAGAGTGCTTCCCCTTTAGAGATTCCGCAGACAAACAATTCCTGTGCTTCA
GCATTGACAGTGTTACCAGGAACAACTAACCTGAGCAAATCGAGTCATAAACCTGAGCCG
AAGGAGCAGAAACCAGATCACCACCTCAAGGAACCTGTTGATGTTGCGTCGATCAAGTCT
CCTGTAGAATCAAGCAAGAAAGTGTTAGTGGAGCATGGAAGCATGAATGGAAGTTCCACT
TCATTTCAGACATGTGAAGGGACTAGTCAAGCAAAGGTTAGTGCAAGTGCTAAGTTCACT
GATCCATCTGAGATTGGTGACAGGGGCAATAGTGGAAGATGCAGGCCTAGCACAAGCAGT
GATATCAGTGATGAGAGCTCATGTAGTAGCATGAGTAGCAGCACAAAGCCTCACAAGGCA
AATGATTCGCAATGGGAAGCAATTCAGACGATCAGAACTAGAGATGGGATCCTTGGATTG
AGTCATTTCAGACTGTTGAAGAGACTAGGCTGTGGCGATATTGGCAGTGTGTATCTCTCG
GAATTGAGTGGGACTAAGAGCTATTTTGCGATGAAAGTTATGGACAAGGCATCACTAGCA
AGCCGTAAAAAGTTGCTTCGAGCTCAAACAGAGAAGGAGATTTTGCAATGCCTGGATCAT
CCCTTCCTTCCTACACTTTACACTCACTTTGAGACCGATAAGTTCTCCTGCCTAGTTATG
GAGTTCTGCCCGGGAGGAGACCTTCACACTCTTCGACAGAGGCAGCCTGGCAAACACTTT
CCAGAGCAAGCTGTCAAATTCTACATAGCTGAAGTCCTCCTGGCACTAGAATACTTGCAC
ATGCTTGGTATCATATACCGTGATCTCAAGCCTGAAAATGTCCTTGTTCGGGAGGATGGG
CACATCATGCTCTCAGACTTCGACCTCTCCCTTCGCTGTGCAGTCAGTCCAACACTGATT
AAATCCTCAAACCCTGATGCAGAAGCACTCAGGAAGAACAGCCAAGGCTACTGTGTTGAG
CCGTCCTGCATTATTCAGCCATCATGTGCAGCCCCAACCACCTGCTTTGGCCCACGCTTG
TTCTCCAAGACCAAGAAAGATCGAAAACCAAAACCTGAAGTTGCCACCCCGATCAACCAT
TGGCCTGAGCTCATAGCAGAGCCCAGTGATGCACGATCAATGTCATTTGTTGGGACACAC
GAGTACCTGGCCCCTGAGATTATCAAAGGTGAGGGTCATGGTAGCGCTGTCGACTGGTGG
ACCTTTGGGATATTCTTGTACGAGCTGCTGTTCGGGAAGACACCTTTCAAGGGATCCAGC
AACCGGGCTACACTGTTCAATGTCATTGGCCAGCAGTTGCGCTTCCCAGAGTACCCGGTT
GTGAGCTTCTCAGCAAGAGATTTAATTAGGGGTCTACTTGTGAAGGAGCCCCAGCAACGG
TTGGCTTACAAGCGTGGAGCCACGGAGATCAAGCAGCATCCCTTCTTTGAGGGCGTGAAT
TGGGCACTGATAAGGTGTGCAAGCCCACCAGAGGTACCAAAGCCTGTCGAGATCGACAGG
CCATCAAAGCATCCTTCATCGCCATCAGGAGCTGCTGATACTTCCATTGGTGCACCCCAG
AAAGGTGCTGACGGCTACTTGGAGTTTGATTTCTTCTAG

Peptide Sequence

PEP ID

OQU85494
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:4:60182294:60185644:-1 gene:SORBI_3004G255800 transcript:OQU85494 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MASKAMPQVLPEMPSIPGPNQCSKSASPLEIPQTNNSCASALTVLPGTTNLSKSSHKPEP
KEQKPDHHLKEPVDVASIKSPVESSKKVLVEHGSMNGSSTSFQTCEGTSQAKVSASAKFT
DPSEIGDRGNSGRCRPSTSSDISDESSCSSMSSSTKPHKANDSQWEAIQTIRTRDGILGL
SHFRLLKRLGCGDIGSVYLSELSGTKSYFAMKVMDKASLASRKKLLRAQTEKEILQCLDH
PFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKHFPEQAVKFYIAEVLLALEYLH
MLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPTLIKSSNPDAEALRKNSQGYCVE
PSCIIQPSCAAPTTCFGPRLFSKTKKDRKPKPEVATPINHWPELIAEPSDARSMSFVGTH
EYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSSNRATLFNVIGQQLRFPEYPV
VSFSARDLIRGLLVKEPQQRLAYKRGATEIKQHPFFEGVNWALIRCASPPEVPKPVEIDR
PSKHPSSPSGAADTSIGAPQKGADGYLEFDFF

Transcript Sequence

Transcript ID

OQU85494
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:4:60182294:60185644:-1 gene:SORBI_3004G255800 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

TCACCTCCAGCTCCAGGGACCCCAAAAACTATGGGACAGGATCATTGCACCTGCGAAATG
AATTACCCAAAAACGATAGAAAAAGATAGCGAATTGACGGGCCGGGGAGCAGAAAGGCAG
GCCATTAATACTTGACACCTCCCGTTTCCTGCCCTCATTCACCCCCTCCGCCATTGCTCG
CTCCACAAGATATGTCCTGCACGCGCCAGAGCTACTAGGGGAGAGCTGGCACAGGAGCGC
AGGCTTCGGGCTCCTCCCATCCCGGCGGCGTCCTTTTCGCGTGTTTGCTTCTTGGGAGCG
CAGCCAGAGATTCGGCTCTTCAGGGCTTCTTCCAGGCTCTGCTGCGCAGCGCAATCGGTT
CTGGTGAGATTTCTGCGGCAGCACATCTCCCCTCCAGTTTTGTTTTTCCCTGGTTCCTGA
TTCGGCTGCCCTTCGTTGTATTGTGCTTTGGTCCTATAGATCTGTCTCGCCTGGGTTCCA
GGATTGTTTTTGCTCATCTCTGCTGTTCTGCATTTCGCAGAAAGATGAGAAAAGTTCGCC
CCTTCTTTTCGCGGCTATTGATTCCTGCTTTCCTCATCTTTCTGCAGCCAACACCAAAAG
AATAAATTGATAAAAATCGGCATTTTGGCTTCGTTGAAATGTGCTCCGACTCCGATTTCA
ACTCGCGAGCTTTACGCACGCGGCGCTCCTTTAACTGCTATGCAGTAGTTTTTCTTTTCT
TTTTTTTTGCAAGGAAAAGCTTTCATTCTGGGGCGGCGGCGACTTTCTTTTGCGAGCAGC
AATGATGTTCCTTTGGCGACCACTCTGCTGATCAAACATTTGTTTATTGCTAAAGAGGAT
GCTAGATCTGTAGCGTTGCATGATTGAGGTTAGTGGGGGGCTGGACATAGTTGATGGTTG
TAACAAGACCTTTCCTAGCTTGACAGATGATGAATCCCCAAGTGCGGCGGACGCACATTG
AGCACCCAATGATGAGCGCTCATGGCGGGAGGCGAATGCTGAATGTGGCCATCATTTTCT
TGGATCAGTATTTCTTTTGATAAATCTTGGTTTATTGTTTATGTTTACTTTAATAGTATG
TCACAGCCTGCGGTAAAAATAGAAGAAGTATGTCACAGCCACATGATGTGTTCTATTTTC
TTGGGGCACTTCATTTCCTCTGTTCTTTTTGGGGAGTAAATATTTCTTGTAAGTTCAGTC
ACTGGGCAATCCTAGTTCATGATTTGATCGAAGTTTTTTTTTTCTTCCCATTTGTAGATT
GTCAATGAAATTTACAATGGAATAGTCCATCACAATGCTATGGTTGCTTCCTGACTGACC
AGATCGAGCTTGTTGTAGTCTCTGGTCATCTGAAAAACAGACGGGTGTTGCAACTATGGC
TTCGAAGGCAATGCCTCAAGTTCTCCCAGAAATGCCAAGCATCCCAGGCCCGAATCAATG
CTCTAAGAGTGCTTCCCCTTTAGAGATTCCGCAGACAAACAATTCCTGTGCTTCAGCATT
GACAGTGTTACCAGGAACAACTAACCTGAGCAAATCGAGTCATAAACCTGAGCCGAAGGA
GCAGAAACCAGATCACCACCTCAAGGAACCTGTTGATGTTGCGTCGATCAAGTCTCCTGT
AGAATCAAGCAAGAAAGTGTTAGTGGAGCATGGAAGCATGAATGGAAGTTCCACTTCATT
TCAGACATGTGAAGGGACTAGTCAAGCAAAGGTTAGTGCAAGTGCTAAGTTCACTGATCC
ATCTGAGATTGGTGACAGGGGCAATAGTGGAAGATGCAGGCCTAGCACAAGCAGTGATAT
CAGTGATGAGAGCTCATGTAGTAGCATGAGTAGCAGCACAAAGCCTCACAAGGCAAATGA
TTCGCAATGGGAAGCAATTCAGACGATCAGAACTAGAGATGGGATCCTTGGATTGAGTCA
TTTCAGACTGTTGAAGAGACTAGGCTGTGGCGATATTGGCAGTGTGTATCTCTCGGAATT
GAGTGGGACTAAGAGCTATTTTGCGATGAAAGTTATGGACAAGGCATCACTAGCAAGCCG
TAAAAAGTTGCTTCGAGCTCAAACAGAGAAGGAGATTTTGCAATGCCTGGATCATCCCTT
CCTTCCTACACTTTACACTCACTTTGAGACCGATAAGTTCTCCTGCCTAGTTATGGAGTT
CTGCCCGGGAGGAGACCTTCACACTCTTCGACAGAGGCAGCCTGGCAAACACTTTCCAGA
GCAAGCTGTCAAATTCTACATAGCTGAAGTCCTCCTGGCACTAGAATACTTGCACATGCT
TGGTATCATATACCGTGATCTCAAGCCTGAAAATGTCCTTGTTCGGGAGGATGGGCACAT
CATGCTCTCAGACTTCGACCTCTCCCTTCGCTGTGCAGTCAGTCCAACACTGATTAAATC
CTCAAACCCTGATGCAGAAGCACTCAGGAAGAACAGCCAAGGCTACTGTGTTGAGCCGTC
CTGCATTATTCAGCCATCATGTGCAGCCCCAACCACCTGCTTTGGCCCACGCTTGTTCTC
CAAGACCAAGAAAGATCGAAAACCAAAACCTGAAGTTGCCACCCCGATCAACCATTGGCC
TGAGCTCATAGCAGAGCCCAGTGATGCACGATCAATGTCATTTGTTGGGACACACGAGTA
CCTGGCCCCTGAGATTATCAAAGGTGAGGGTCATGGTAGCGCTGTCGACTGGTGGACCTT
TGGGATATTCTTGTACGAGCTGCTGTTCGGGAAGACACCTTTCAAGGGATCCAGCAACCG
GGCTACACTGTTCAATGTCATTGGCCAGCAGTTGCGCTTCCCAGAGTACCCGGTTGTGAG
CTTCTCAGCAAGAGATTTAATTAGGGGTCTACTTGTGAAGGAGCCCCAGCAACGGTTGGC
TTACAAGCGTGGAGCCACGGAGATCAAGCAGCATCCCTTCTTTGAGGGCGTGAATTGGGC
ACTGATAAGGTGTGCAAGCCCACCAGAGGTACCAAAGCCTGTCGAGATCGACAGGCCATC
AAAGCATCCTTCATCGCCATCAGGAGCTGCTGATACTTCCATTGGTGCACCCCAGAAAGG
TGCTGACGGCTACTTGGAGTTTGATTTCTTCTAGCAAATATGTGGGTTTTACTATATTGT
TTCTCCACTGGATGTAGGGTTTTCTGATGTTATGTTTTTTTACCAGATGGTTGGTGCTGT
AGATTTGTCTCT