Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

OQU85452
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:4:59478213:59483242:-1 gene:SORBI_3004G247100 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGAACTGCTTGAAGAACTCGCGCTCCGTCCTCTCGCGACTCCTCTGCCACAGGCCCCAC
GTAGCCGTGCCGCCGACGCCGGCGCCGCAGTCACCGGCCTCGCGTTACTACTACTACTAC
GCCTCCCGCGTCCTCCGCAACAAGCCAGCCGTCTCCCGACCGGCTCCGCCACCGCTGCCG
CCGCCGCAGTTGCCGAGACCTAGGCACTACTACACATCCCCGCGGCGGCAGGAGGTCATC
CACTTCAGCCGCCGCCGCGGCGGGTCCCGGTGGTACCACGACCAGCGGAAGCTCACGGCG
GCGGTCCTCGTCACCGGGGGCGTGGCGGTCGTCTTCTACTTCGGCCATCTGGAGACCGTG
CCCTACACCAACCGCTCCCACCTCGTCGTCCTCTCGCCGAGGCTCGAGCGCCAGCTCGGC
GAGACCCAGTTCGCCCAGCTCAAGAAGGAGTTCGGCCCCAAGATCCTGCCCCCGCTCCAC
CCTGACAGCATCCGCGTCCGCCTCATCGCCTCGGAGATCGTCCGCGCCGTCCACCGTGGC
GTCTCCGGCCACCAGCGCTACGGCGCTGCCTACGGAGAGGATGCCTCATATGGGTATGGC
GGCATCGCCGACGACCTCACCATCAAGAACCGCGACGCCGACGCTACTGCAGCGATGTTT
GGTGCTTCCCCTGACAAGAACGCGAGCGCTGCCGCGGCCGCTCAGCGAGACGACGAGGTT
CTGGATGACAGGTGGGTGACCGAGAGCCGGAGCCGTGGTAAGGCACGCGGGGCGCAGCCG
CAGACGGGTCACCTGGATGGGCTTAATTGGGAGGTGATTGTTGTCAAAGATGACATCGTC
AATGCATTTTGCCTGCCCGGTGGCAAGATTGTAATCTTCACTGGATTGCTTGACAAATTC
AGGGCCGATGCTGAGGTTGCCACTGTGCTTGGGCATGAGGTTGGGCATGCTATTGCAAGG
CACGCCGCTGAGCAGATCACTAAGAACCTCTGGGTGGCAATCCTGCAGATTGTCATCCTG
CAGTTTATTTACATGCCAGACTTGATAAATACAGTGTCAACACTCCTCCTCAGGCTACCC
TTCTCACGAAGAATGGAGATAGAGGCTGACCACATTGGGCTCCTGCTGCTCGCTGCTGCT
GGTTACGATCCGCGTGTTGCCCCATCGATCTATGAGAAACTAGGAAAGATCGGAGGAGAT
TCAGCATTGAATAACTACCTCTCGACTCATCCGTCCAGCAAGAAGAGAGCGCAGCTTCTG
TCGCGAGCCAGTGTCATGAACGAGGCACTGGAACTGTACAGGGAGGTTAGTGCCGGCCAA
GGCACTGAAGTGGTTCAGATTCCTGGAAGATTAGACTGTACTCTTGCTCCTCGTAATTTC
CAGTCGTTGTGA

Peptide Sequence

PEP ID

OQU85452
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:4:59478213:59483242:-1 gene:SORBI_3004G247100 transcript:OQU85452 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MNCLKNSRSVLSRLLCHRPHVAVPPTPAPQSPASRYYYYYASRVLRNKPAVSRPAPPPLP
PPQLPRPRHYYTSPRRQEVIHFSRRRGGSRWYHDQRKLTAAVLVTGGVAVVFYFGHLETV
PYTNRSHLVVLSPRLERQLGETQFAQLKKEFGPKILPPLHPDSIRVRLIASEIVRAVHRG
VSGHQRYGAAYGEDASYGYGGIADDLTIKNRDADATAAMFGASPDKNASAAAAAQRDDEV
LDDRWVTESRSRGKARGAQPQTGHLDGLNWEVIVVKDDIVNAFCLPGGKIVIFTGLLDKF
RADAEVATVLGHEVGHAIARHAAEQITKNLWVAILQIVILQFIYMPDLINTVSTLLLRLP
FSRRMEIEADHIGLLLLAAAGYDPRVAPSIYEKLGKIGGDSALNNYLSTHPSSKKRAQLL
SRASVMNEALELYREVSAGQGTEVVQIPGRLDCTLAPRNFQSL

Transcript Sequence

Transcript ID

OQU85452
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:4:59478213:59483242:-1 gene:SORBI_3004G247100 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

GAAAAAATCCCCTCAAAAAAGGGGAAAATAACACACAACATGAACTGCTTGAAGAACTCG
CGCTCCGTCCTCTCGCGACTCCTCTGCCACAGGCCCCACGTAGCCGTGCCGCCGACGCCG
GCGCCGCAGTCACCGGCCTCGCGTTACTACTACTACTACGCCTCCCGCGTCCTCCGCAAC
AAGCCAGCCGTCTCCCGACCGGCTCCGCCACCGCTGCCGCCGCCGCAGTTGCCGAGACCT
AGGCACTACTACACATCCCCGCGGCGGCAGGAGGTCATCCACTTCAGCCGCCGCCGCGGC
GGGTCCCGGTGGTACCACGACCAGCGGAAGCTCACGGCGGCGGTCCTCGTCACCGGGGGC
GTGGCGGTCGTCTTCTACTTCGGCCATCTGGAGACCGTGCCCTACACCAACCGCTCCCAC
CTCGTCGTCCTCTCGCCGAGGCTCGAGCGCCAGCTCGGCGAGACCCAGTTCGCCCAGCTC
AAGAAGGAGTTCGGCCCCAAGATCCTGCCCCCGCTCCACCCTGACAGCATCCGCGTCCGC
CTCATCGCCTCGGAGATCGTCCGCGCCGTCCACCGTGGCGTCTCCGGCCACCAGCGCTAC
GGCGCTGCCTACGGAGAGGATGCCTCATATGGGTATGGCGGCATCGCCGACGACCTCACC
ATCAAGAACCGCGACGCCGACGCTACTGCAGCGATGTTTGGTGCTTCCCCTGACAAGAAC
GCGAGCGCTGCCGCGGCCGCTCAGCGAGACGACGAGGTTCTGGATGACAGGTGGGTGACC
GAGAGCCGGAGCCGTGGTAAGGCACGCGGGGCGCAGCCGCAGACGGGTCACCTGGATGGG
CTTAATTGGGAGGTGATTGTTGTCAAAGATGACATCGTCAATGCATTTTGCCTGCCCGGT
GGCAAGATTGTAATCTTCACTGGATTGCTTGACAAATTCAGGGCCGATGCTGAGGTTGCC
ACTGTGCTTGGGCATGAGGTTGGGCATGCTATTGCAAGGCACGCCGCTGAGCAGATCACT
AAGAACCTCTGGGTGGCAATCCTGCAGATTGTCATCCTGCAGTTTATTTACATGCCAGAC
TTGATAAATACAGTGTCAACACTCCTCCTCAGGCTACCCTTCTCACGAAGAATGGAGATA
GAGGCTGACCACATTGGGCTCCTGCTGCTCGCTGCTGCTGGTTACGATCCGCGTGTTGCC
CCATCGATCTATGAGAAACTAGGAAAGATCGGAGGAGATTCAGCATTGAATAACTACCTC
TCGACTCATCCGTCCAGCAAGAAGAGAGCGCAGCTTCTGTCGCGAGCCAGTGTCATGAAC
GAGGCACTGGAACTGTACAGGGAGGTTAGTGCCGGCCAAGGCACTGAAGTGGTTCAGATT
CCTGGAAGATTAGACTGTACTCTTGCTCCTCGTAATTTCCAGTCGTTGTGAGGCCGAACG
GGCCCTCGTCGTTCCCCAAGCAGAAGCGTAGCTGCTTTTCATTTGTGATTAGGAGAAATA
AATAAAGCAGTCCATATTGTTAATAATTGTTAGTTGACAGCCGCTTCTGTTTCCAGTGTG
GTTTTGGTCCGTTCATGCTGATGGGGCGATGGCTGAACCGGGAAATGATTGGTTTTCAGC
AAAGGATCATCACACATCGTTCTCTTGGTTTCTGGATGTGCCTATGTACTTGTGTATTTG
TCTCCGTCCACAAATGTCTTGCGTATTATTTCTTAACGCAAATACGACATCTAGTCAGGA
CTCCAAATCTGCACCATCATCCACCAGTAGCAGTAGTACATGACAAACAAGATATCCCTA
AGCTTTCTTGGCGATGCCCCACACGGCCAGCAGACAAGCTTTGCTTCCATCAGCAGCAAC
AGCATATTGTAGAGCTGAA