Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

OQU85421
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:4:58370928:58373540:1 gene:SORBI_3004G235900 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGCCGTCAGTAGGATGCCGGCGATCTGGGTACTACTAATAGGTGCAGTCTTGACGTTT
GGGGTTGCAGTCAGTCCAGCTCAAGCGTCCAGGTCTCATCGTCACTACGATTTCGTCATA
AAGAAAGCTGACTACACCAGGCTCTGCCAGCGGAAGAGCATACTCACCGTGAACGGGCAG
TTCCCCGGTCCAACCATCTACGCGCGCAAGGGCGACGTCGTCACCGTCAATGTTCACAAC
CATGGCGATAAAAACATCACCGTCCATTGGCACGGCGTGGACCAGCCGCGGAACCCGTGG
TCCGACGGGCCGGAGTTCATCACGCAGTGCCCCATCCAGCCCGGCGCAAGCTTCACCTAC
AAGATCATCCTCACCTGGGAGGAAGGCACGCTGTGGTGGCACGCGCACAGCGATTTCGAC
CGCAACACCGTGCACGGCGCCATCGTCATCCGCCCCAGGCGTGGCACTACCTACCCGTTC
AAGAAACCCCACAAGGAGATACCCATCTTCCTTGGTGAGTGGTGGAAGGTCGACCTCCGG
CAGGTGCTCGCCGACGCGCTCCGTACCGGCAGCGAGTTCAACGCATCCGACGCGAACACC
ATCAACGGCCAGCCCGGCGACCTGTTCCCGTGCTCCAGGGACGGCACGTTCAAGCTTCCC
GTCGAGGACGGCAAGACGTACATGCTCCGCCTCATCAACGCGGTGTTCACCTACGAGTCC
TTCTTCAGCGTCGCCGGGCACAGCCTCACCGTGATCGGCACCGACGGCTCCTACGTGAAG
CCGTTCGCCGTGGACTACGTCTTCATCGCGCCGGGGCAGACGGTGACCGCTCTGCTCACG
GCCGACCGCGCCTCGCGTGGGCTGCGGAACGCCCGGTACTACATGGCGGCGCGGCCGCTG
TTACCGAACAACCCGTTCATAAGCTTCGACAAGTACGACAACAGCGTCGCCACCGCCGTG
CTGGAGTACGCCGACGACGACGCGGCGGCGGCGGCGGCCCCGGACCCGGAGTTCCCCGTC
CTGCCGGCCATCAACGACAGCGCGGCGGCGGACGCGTACACGACGCGCCTACGGTCGCTC
GCCAGCGAGGAGCACCCGGTGAGCGTGCCTCGCCACGTCCAGGAGCACATGCTCGTCACC
CTCGCGGTGAACTTCCTCGCGTGCTCCCCCGACGAGCACTGCCAGGGGCCCCAAGGCAAC
CGCATGGGCGCGAGCCTGAACAACGTGAGCTTCGAGGCGCCGCGGCACGCGAGCATCCTC
GACGCGTACTACCACAAGGACAAGGTCCGTGGCGTGCACACGACCGATGACCTGTTCCCT
AGCAACCCGCCGCTGCTGTTCAACTTCACGGCCGGCGACGACCTCCCTCAGGAGCTCTGG
TTCACGAAGCGCGGCGCGAAGGTGAAGGTGCTGGAGTACGGATCCACGGTGGAGGTGGTG
CTCCAGAACACGGCGCTGCTCGGCGGCGATAGCCACCCCATTCACCTGCACGGGTTCAGC
TTCTACGTGGTGGGAACGGGTTCCGGCAACTTCGACGGGGATAGGGACCCCGCCGGCTAC
AACTTGGTCGACCCGCCGTACCAGAACACGGTCGCTGTGCCCAATGGCGGGTGGTCTGCG
ATCCGTTTCCGTGCCGAAAATCCTGGTGTGTGGTTCATGCACTGTCACTTCGAACGGCAC
ATGGCGTGGGGGATGGACACCGTTTTCATCGTCAAGGATGGGAATGTCCCGGAAGCTAAG
ATGTTGCCACCACCTCCGGGGATGCCTAGGTGTTGA

Peptide Sequence

PEP ID

OQU85421
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:4:58370928:58373540:1 gene:SORBI_3004G235900 transcript:OQU85421 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MAVSRMPAIWVLLIGAVLTFGVAVSPAQASRSHRHYDFVIKKADYTRLCQRKSILTVNGQ
FPGPTIYARKGDVVTVNVHNHGDKNITVHWHGVDQPRNPWSDGPEFITQCPIQPGASFTY
KIILTWEEGTLWWHAHSDFDRNTVHGAIVIRPRRGTTYPFKKPHKEIPIFLGEWWKVDLR
QVLADALRTGSEFNASDANTINGQPGDLFPCSRDGTFKLPVEDGKTYMLRLINAVFTYES
FFSVAGHSLTVIGTDGSYVKPFAVDYVFIAPGQTVTALLTADRASRGLRNARYYMAARPL
LPNNPFISFDKYDNSVATAVLEYADDDAAAAAAPDPEFPVLPAINDSAAADAYTTRLRSL
ASEEHPVSVPRHVQEHMLVTLAVNFLACSPDEHCQGPQGNRMGASLNNVSFEAPRHASIL
DAYYHKDKVRGVHTTDDLFPSNPPLLFNFTAGDDLPQELWFTKRGAKVKVLEYGSTVEVV
LQNTALLGGDSHPIHLHGFSFYVVGTGSGNFDGDRDPAGYNLVDPPYQNTVAVPNGGWSA
IRFRAENPGVWFMHCHFERHMAWGMDTVFIVKDGNVPEAKMLPPPPGMPRC

Transcript Sequence

Transcript ID

OQU85421
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:4:58370928:58373540:1 gene:SORBI_3004G235900 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

GACGTGCTTCACTAGTCAACAACTGCACTACCACATTGACGCTCTTAACAGCATTTTTCT
CTCAAGTGTCCGACGATGGCCGTCAGTAGGATGCCGGCGATCTGGGTACTACTAATAGGT
GCAGTCTTGACGTTTGGGGTTGCAGTCAGTCCAGCTCAAGCGTCCAGGTCTCATCGTCAC
TACGATTTCGTCATAAAGAAAGCTGACTACACCAGGCTCTGCCAGCGGAAGAGCATACTC
ACCGTGAACGGGCAGTTCCCCGGTCCAACCATCTACGCGCGCAAGGGCGACGTCGTCACC
GTCAATGTTCACAACCATGGCGATAAAAACATCACCGTCCATTGGCACGGCGTGGACCAG
CCGCGGAACCCGTGGTCCGACGGGCCGGAGTTCATCACGCAGTGCCCCATCCAGCCCGGC
GCAAGCTTCACCTACAAGATCATCCTCACCTGGGAGGAAGGCACGCTGTGGTGGCACGCG
CACAGCGATTTCGACCGCAACACCGTGCACGGCGCCATCGTCATCCGCCCCAGGCGTGGC
ACTACCTACCCGTTCAAGAAACCCCACAAGGAGATACCCATCTTCCTTGGTGAGTGGTGG
AAGGTCGACCTCCGGCAGGTGCTCGCCGACGCGCTCCGTACCGGCAGCGAGTTCAACGCA
TCCGACGCGAACACCATCAACGGCCAGCCCGGCGACCTGTTCCCGTGCTCCAGGGACGGC
ACGTTCAAGCTTCCCGTCGAGGACGGCAAGACGTACATGCTCCGCCTCATCAACGCGGTG
TTCACCTACGAGTCCTTCTTCAGCGTCGCCGGGCACAGCCTCACCGTGATCGGCACCGAC
GGCTCCTACGTGAAGCCGTTCGCCGTGGACTACGTCTTCATCGCGCCGGGGCAGACGGTG
ACCGCTCTGCTCACGGCCGACCGCGCCTCGCGTGGGCTGCGGAACGCCCGGTACTACATG
GCGGCGCGGCCGCTGTTACCGAACAACCCGTTCATAAGCTTCGACAAGTACGACAACAGC
GTCGCCACCGCCGTGCTGGAGTACGCCGACGACGACGCGGCGGCGGCGGCGGCCCCGGAC
CCGGAGTTCCCCGTCCTGCCGGCCATCAACGACAGCGCGGCGGCGGACGCGTACACGACG
CGCCTACGGTCGCTCGCCAGCGAGGAGCACCCGGTGAGCGTGCCTCGCCACGTCCAGGAG
CACATGCTCGTCACCCTCGCGGTGAACTTCCTCGCGTGCTCCCCCGACGAGCACTGCCAG
GGGCCCCAAGGCAACCGCATGGGCGCGAGCCTGAACAACGTGAGCTTCGAGGCGCCGCGG
CACGCGAGCATCCTCGACGCGTACTACCACAAGGACAAGGTCCGTGGCGTGCACACGACC
GATGACCTGTTCCCTAGCAACCCGCCGCTGCTGTTCAACTTCACGGCCGGCGACGACCTC
CCTCAGGAGCTCTGGTTCACGAAGCGCGGCGCGAAGGTGAAGGTGCTGGAGTACGGATCC
ACGGTGGAGGTGGTGCTCCAGAACACGGCGCTGCTCGGCGGCGATAGCCACCCCATTCAC
CTGCACGGGTTCAGCTTCTACGTGGTGGGAACGGGTTCCGGCAACTTCGACGGGGATAGG
GACCCCGCCGGCTACAACTTGGTCGACCCGCCGTACCAGAACACGGTCGCTGTGCCCAAT
GGCGGGTGGTCTGCGATCCGTTTCCGTGCCGAAAATCCTGGTGTGTGGTTCATGCACTGT
CACTTCGAACGGCACATGGCGTGGGGGATGGACACCGTTTTCATCGTCAAGGATGGGAAT
GTCCCGGAAGCTAAGATGTTGCCACCACCTCCGGGGATGCCTAGGTGTTGATGTGATGAC
CAATTAAAGGTTGATATGGAACCGATTTTATTAGTAGTTTTTTATTTGAGAGAGAGAGAG
GAGAGATATCCATTAATTAATTATTAGTAGCTTTACTAGCCAGGCCTGGGCCAATTCTCG
TTGGGCCTTTGAAAGCAGACTGCAAACCCAAACTCTCGGGCCAATCAAACTTCACTGAGA
CTGTTTTATGGCAGATCAATTTGTACACTTCTATTGGTTTTCTTTCTTTCTTGTTTATTT
ATTGATTATTGTGTGTATGTATTTGTAACATTTTTTTATATCTATATGTATACCTAATAA
TAATATTAAATAGCG