Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

OQU85412
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:4:58230679:58235317:1 gene:SORBI_3004G233700 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGACCGGCAAGTACGCCGCCGTCTTCGTCCGCGGCGTGCAGGGCTACGGCGTCGCCGGC
CCCGTCAACTCCACCGACCTCGAGGCCTCCGCCTGCTGCAAGCACTTCACCGCCTACGAC
CTCGAGAACTGGAAGGGCATCACCCGATACGTCTACGACGCCAAGGTGACGGCACAGGAT
CTGGAGGACACGTACAACCCTCCGTTCAAGAGCTGCGTGGAGGACGGCCATGCCAGCGGC
ATCATGTGCTCCTACAACCGCGTCAATGGCGTGCCGACGTGCGCCGACTACAACCTGCTC
TCCAAGACGGCGAGGCAGAGCTGGGGTTTTTACGGGTATATCACCTCAGACTGCGACGCT
GTGTCCATCATCCATGATGCACAAGGATATGCCAAGACGTCAGAAGATGCAGTTGCAGAT
GTGCTCAAAGCTGGAATGGACGTGAACTGCGGCGGCTATGTGCAGAAATACGGCGCCTCC
GCGCTCCAGCAAGGGAAGATCACGGAGCAGGACATCAACCGGGCCCTGCACAACCTGTTC
ACCGTCAGGATGAGGCTGGGGCTCTTCAACGGCGACCCGAGGCGGAACCGGTACGGCAAC
ATCGGGCCCGACCAGGTGTGCACGCAGGAGCACCAGGACCTGGCCCTGGAGGCGGCGCAG
GACGGCATCGTCCTGCTCAAGAACGACGGCGGCGCGCTCCCGCTGTCCAAGTCCGGCGTC
GCGTCCCTCGCCGTGATCGGGTTCAACGCGAACAACGCCACCAGCCTGCTCGGCAACTAC
TTCGGCCCGCCGTGCGTGACGGTGACGCCGCTCCAGGTGCTGCAGGGCTACGTGAAGGAT
ACGAGCTTCGTCGCCGGCTGCAACTCGGCCGCCTGCAACGTCACGACGATTCCCGAGGCG
GTCCAGGCCGCGAGCTCGGCGGACTCCGTCGTCTTGTTCATGGGGCTGGATCAGAATCAG
GAGAGGGAGGAGGTTGACCGGCTGGACCTGACGCTCCCGGGACAGCAGCAGACCCTCATC
GAGAGCGTCGCGAACGCCGCGAAGAAGCCGGTGATCCTTGTGCTGCTCTGCGGCGGGCCC
GTGGATGTGAGCTTCGCCAAGACGAACCCCAAGATTGGTGCCATCCTGTGGGCTGGATAC
CCCGGCGAGGCCGGCGGCATTGCCATCGCACAGGTCCTCTTCGGAGAGCACAACCCCGGT
GGAAGGCTTCCCGTGACGTGGTATCCCCAAGATTTCACGAAGGTGCCCATGACGGACATG
CGGATGCGCGCCGACCCAGCCACGGGGTACCCCGGCCGGACGTACCGGTTCTACCGCGGG
CCGACCGTGTTCAACTTCGGCTACGGCCTCAGCTACTCCAAGTACTCCCACCGCTTCGTC
ACGAAGCCCCCGCCCTCCATGAGCAACGTCGCCGGCTTGAAGGCGCTGGCGACGACGGCG
GGCGGCGTGGCGACCTACGACGTGGAGGCGATCGGGTCGGAGACGTGCGACCGGCTCAAG
TTCCCGGCGGTGGTGCGGGTGCAGAACCACGGGCCCATGGACGGGAAGCACCCGGTGCTG
GTGTTCCTGCGCTGGCCCAACGCGACGGACGGCAGCGGCCGGCCGGCCAGACAGCTGATC
GGGTTCCAGAGCCTGCACTTGAGGGCGACGCAGACGGCGCACGTGGAGTTCGAGGTGAGC
CCCTGCAAGCACTTCAGCCGGGCGACGGAGGATGGCAGGAAGGTGATCGATCAGGGCTCG
CACTTCGTGATGGTCGGCGACGACGAGTTCGAGATGAGCTTCATGGCATGA

Peptide Sequence

PEP ID

OQU85412
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:4:58230679:58235317:1 gene:SORBI_3004G233700 transcript:OQU85412 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MTGKYAAVFVRGVQGYGVAGPVNSTDLEASACCKHFTAYDLENWKGITRYVYDAKVTAQD
LEDTYNPPFKSCVEDGHASGIMCSYNRVNGVPTCADYNLLSKTARQSWGFYGYITSDCDA
VSIIHDAQGYAKTSEDAVADVLKAGMDVNCGGYVQKYGASALQQGKITEQDINRALHNLF
TVRMRLGLFNGDPRRNRYGNIGPDQVCTQEHQDLALEAAQDGIVLLKNDGGALPLSKSGV
ASLAVIGFNANNATSLLGNYFGPPCVTVTPLQVLQGYVKDTSFVAGCNSAACNVTTIPEA
VQAASSADSVVLFMGLDQNQEREEVDRLDLTLPGQQQTLIESVANAAKKPVILVLLCGGP
VDVSFAKTNPKIGAILWAGYPGEAGGIAIAQVLFGEHNPGGRLPVTWYPQDFTKVPMTDM
RMRADPATGYPGRTYRFYRGPTVFNFGYGLSYSKYSHRFVTKPPPSMSNVAGLKALATTA
GGVATYDVEAIGSETCDRLKFPAVVRVQNHGPMDGKHPVLVFLRWPNATDGSGRPARQLI
GFQSLHLRATQTAHVEFEVSPCKHFSRATEDGRKVIDQGSHFVMVGDDEFEMSFMA

Transcript Sequence

Transcript ID

OQU85412
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:4:58230679:58235317:1 gene:SORBI_3004G233700 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCGTGCTATGGTAAA
CGCGCGGGGCATGCACGACCTGCCCATCGTTTTCACGTGTCCTTTGTGTTGCTGTGCGAC
GACAGCAGGAGAACGTGGCTGTTTCACGACTAACCACTGCCCTACTGGTAGTAGTACGCG
TGATTAGTGATAATTATCGCTTTTCCCCCTAGAATCTAGATAGGGGGGCCATCTCTTAAA
TTGCTACTACTAAAATTAAAACAAAATGGAAGGTGATCCAGCACGTAGAGCGTGAGAAAT
GATGAGGAGGGGCACTAGAGCAGGCCATTTTCTGCAACAAACTCCAAAGAAATGCCGCGT
GTTCTTGCACCTAATTTCACCAACCGGGTGTAACAGCTTTTGAACGCATATACGTACCGT
AACGGTAGGTGCATGCAGCTTTTCTCCTTTCGGTCAAAATTGATGGAGGCGATTCGGGCC
GTTCCGTTCGGTCTTGACTCTTGAGCAGACTGAGAAATTCACAACAAACGTTGTACCACT
CGTGTTGTCCTTTTGTGCTATAAAAAACAAATGAAATGTAGTTTCTGAACGGAATGTAGT
GTCTCAACTGTACTGTACCTAACAAAGTTGATTTTTCTTTTTTGTCTATTGTCGAGCATT
AGAATTGTTCTCTGCTATGTGAGCAAATCTTGAAAGCAGAGAGTGATGTTACTTACTGAT
GATGCGACGTCGACGGGCAGGTGATCGGCGTTGAGGCGAGGGCGGTGTACAACAACGGGC
AGGCGGAGGGGCTCACGTTCTGGGCGCCCAACATCAACGTGTTCCGTGACCCGCGTTGGG
GCCGCGGGCAGGAGACCCCCGGCGAGGACCCCACGATGACCGGCAAGTACGCCGCCGTCT
TCGTCCGCGGCGTGCAGGGCTACGGCGTCGCCGGCCCCGTCAACTCCACCGACCTCGAGG
CCTCCGCCTGCTGCAAGCACTTCACCGCCTACGACCTCGAGAACTGGAAGGGCATCACCC
GATACGTCTACGACGCCAAGGTGACGGCACAGGATCTGGAGGACACGTACAACCCTCCGT
TCAAGAGCTGCGTGGAGGACGGCCATGCCAGCGGCATCATGTGCTCCTACAACCGCGTCA
ATGGCGTGCCGACGTGCGCCGACTACAACCTGCTCTCCAAGACGGCGAGGCAGAGCTGGG
GTTTTTACGGGTATATCACCTCAGACTGCGACGCTGTGTCCATCATCCATGATGCACAAG
GATATGCCAAGACGTCAGAAGATGCAGTTGCAGATGTGCTCAAAGCTGGAATGGACGTGA
ACTGCGGCGGCTATGTGCAGAAATACGGCGCCTCCGCGCTCCAGCAAGGGAAGATCACGG
AGCAGGACATCAACCGGGCCCTGCACAACCTGTTCACCGTCAGGATGAGGCTGGGGCTCT
TCAACGGCGACCCGAGGCGGAACCGGTACGGCAACATCGGGCCCGACCAGGTGTGCACGC
AGGAGCACCAGGACCTGGCCCTGGAGGCGGCGCAGGACGGCATCGTCCTGCTCAAGAACG
ACGGCGGCGCGCTCCCGCTGTCCAAGTCCGGCGTCGCGTCCCTCGCCGTGATCGGGTTCA
ACGCGAACAACGCCACCAGCCTGCTCGGCAACTACTTCGGCCCGCCGTGCGTGACGGTGA
CGCCGCTCCAGGTGCTGCAGGGCTACGTGAAGGATACGAGCTTCGTCGCCGGCTGCAACT
CGGCCGCCTGCAACGTCACGACGATTCCCGAGGCGGTCCAGGCCGCGAGCTCGGCGGACT
CCGTCGTCTTGTTCATGGGGCTGGATCAGAATCAGGAGAGGGAGGAGGTTGACCGGCTGG
ACCTGACGCTCCCGGGACAGCAGCAGACCCTCATCGAGAGCGTCGCGAACGCCGCGAAGA
AGCCGGTGATCCTTGTGCTGCTCTGCGGCGGGCCCGTGGATGTGAGCTTCGCCAAGACGA
ACCCCAAGATTGGTGCCATCCTGTGGGCTGGATACCCCGGCGAGGCCGGCGGCATTGCCA
TCGCACAGGTCCTCTTCGGAGAGCACAACCCCGGTGGAAGGCTTCCCGTGACGTGGTATC
CCCAAGATTTCACGAAGGTGCCCATGACGGACATGCGGATGCGCGCCGACCCAGCCACGG
GGTACCCCGGCCGGACGTACCGGTTCTACCGCGGGCCGACCGTGTTCAACTTCGGCTACG
GCCTCAGCTACTCCAAGTACTCCCACCGCTTCGTCACGAAGCCCCCGCCCTCCATGAGCA
ACGTCGCCGGCTTGAAGGCGCTGGCGACGACGGCGGGCGGCGTGGCGACCTACGACGTGG
AGGCGATCGGGTCGGAGACGTGCGACCGGCTCAAGTTCCCGGCGGTGGTGCGGGTGCAGA
ACCACGGGCCCATGGACGGGAAGCACCCGGTGCTGGTGTTCCTGCGCTGGCCCAACGCGA
CGGACGGCAGCGGCCGGCCGGCCAGACAGCTGATCGGGTTCCAGAGCCTGCACTTGAGGG
CGACGCAGACGGCGCACGTGGAGTTCGAGGTGAGCCCCTGCAAGCACTTCAGCCGGGCGA
CGGAGGATGGCAGGAAGGTGATCGATCAGGGCTCGCACTTCGTGATGGTCGGCGACGACG
AGTTCGAGATGAGCTTCATGGCATGATCCCGGTTGTGAATTGTGATGCTCTCTTAACTTA
TTCAAAAGAAAAAGGGTAATTGGAGCAAGATTACGGCATTATTGATGCCTGAGGTTCATT
GATAAGAAGTCTCCCCGCCTCTCCTTCTATTCTTTTCGAACAAGCTAAGGGAAGTAGGAA
TTATATTGATTACTAGCAAATATGCACGTGCGACACACACGTATTTCTATGTGAGAACCA
ATAGAAATAGCTCACACATAGTGTCTATGGTTATTACAGGCTTACATACTTTAACGTGTG
ACTGTCAAAAACAATGGTATAATTAAAATAAAAAACATATATATATTGCTATAGCAAGTA
ATAATTGACATAAATAGGAAAAATAGATTTATTAAACTGAGTTGAGTGATTTATTATTTA
AATAATGTAGATAATTAGGATTTAATGTTTTTCTTAGTTCCTTTGCTGTTCATCTATATG
GCATAGTAAGCAGAAATAAATTATAACATAATTTTACATGATTATCATAAGTCACAAATG
CAACCAAACAAGAAAAATTAATCAATTAATTTAACATACCTTTGTGACATCGGTAGTTCA
TCCATATACACAATAGTTTTTGTCCTCTTTCTATTGAGATGAATAGCTTTGTTTTGGCTA
AAACCTCATCTTTGGACAACACTGTTTCAGAAATACAACAATTATTG