Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

OQU85383
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:4:57855776:57862834:-1 gene:SORBI_3004G228800 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGTGGGTGTTCTACCTGATATCGCTGCCCCTGACGCTGGGCATGGTCGTCGTCACGCTC
CGCTACTTCGCCGGCCCCGCTGTGCCGCGCTACGTTGTCGTCACCGTCGGATACGCATGG
TTCTGCTCCCTCTCCATCATCATCCTCGTCCCCGCCGACATCTGGCAGACATTAACTGGC
AGTGCAAAGGGTGGCATTGGATTCTTTTGGAGCTGGTCCTATTGGAGCACATTTATCCTA
ACATGGGCTGTAGTTCCTACTATCCAGGGCTATGAAGATGCAGGAGACTTCACTGTTAAA
GAAAGGCTGAAAACTAGCATTCATATGAACCTGCTTTTTTATTCAATTGTGGGAGCCATT
GGCCTTATTGGTCTCATACTACTCTTAATCATGCATAGAGCTTGGGATGGTGGTATTGTG
GGATTTGCAATGGCATGCTCAAATACCTTTGGATTAGTGACTGGTGCTTTTCTTCTTGGG
TTTGGGCTAAGCGAAATTCCAAGAAACATTTGGAAAAACGCAGACTGGTCTCACCGCCAA
AAAGTTGCTCAAGCTACATCAAATCAAATGTCAAAACGTGACATTTTGAGGCCTTACATG
GATATTATTGATAACATGCTGTCTCAAATGCTGCGGGAGGATCCATCCTTTAAACCTTCT
GGTGGTAGATTAGGTGAAAATGATATGGACTATGATACTGATGATAAATCGATGGCCACA
CTTCGGCGCCAACTCAGGAGAGCTCATGAGGAGTACTATAGGTGCAAAAGTGAGTATATG
ACTTGTGTCATGGAAGCCCTCAAACTAGAAGACACAATAAAAAATTATGAACGCCGTGAT
GCTAATGGATGGAAATATGTATCAAGTTTTAGAGAAAGTCGTTCAGGCACACTTGGATCA
ATTTTGGACACTATTGAGTTCATTTGGCGCTGTATACTGAGAAAGCAGCTTCAAAAAGCA
TTTGCTGTTATCCTTGGCTGCATGTCAGCTGCTATACTGTTGGCTGAAGCTACTTTACTT
CCAAGTGGTGTTGATCTCTCTCTCTTTTCTATTCTTATAAAAGCTGTAGGAAAACAAGAG
GTTTTAGTTCAGGTTGCTGCTTTTGTCCCCTTGATGTATATGTGCATTTGCACATATTAT
TCATTATTCAAGATTGGTATGTTGATGTTCTATTCTCTAACTCCAAGGCAAACCAGCTCT
GTCAGCTTGCTTATGATCTGTTCAATGGTTGCAAGATATGCACCTCCTATTTCTTATAAC
TTTCTTAATCTCATCCGCCTTGGTGGCAATGCTAAAACTACATTTGAGAAGAGAATGGGG
AACATTGATGATGCAGTCCCTTTCTTCGGCAGAGGCTTCAACAGGATCTACCCACTGATT
ATGGTTGTTTATACGCTATTGGTTGCTAGTAATTTCTTTGGCCGTGTGATTGACTTTTTG
GGAAGCTGGAAAAGGTTCAAGTTCCAACGTGAAGAAGAGAATATAGATGGTTTAGATCCC
TCTGGAATGATTATTCTACAAAAAGAGAGGTCTTGGCTTGAACAAGGGTGCAAAGTGGGC
GAGCAAGTTATTCCATTGGCAAGGAATTTCAATGGCGTGAACACAGATATTGAATCACAA
AATGTTCCATTGGTTGAAAATACAGTGGAGATGAAAGTTGGGGCAACCTCTTCCAGAAAT
GATGGGAGAGCCGGTCAGTCGAAATATGCAAACAACAGGGAGACTATCGCCAGCAAATAC
ACTTCTATTAGAGAACAGAACCGGCAGTCAGGGAAGGCAGTGAGAAAGGAAATTTCACCG
AACTCTGTATCTTTGCTTGAAGAAAGAAATTCTGAGCAGCGGTCCAATGCGGGTGTACCA
CCAACTGGTGTGTCTGCAACATGGGCCTCGATGAAGAATGGTTTTCAAAATTTCAAAGCA
AATATGGGTTCAAAGAAGTTTCTTCCTTTGCGCCAAGATCCAGGATTTGTTCTGAATTCA
AATGTCTCTTCACCTGAATCTCTTGATGACATATTCCAAAGGTTGAAACGGCGGCCTGCA
AATGTACCTGTGGATTACCTTGACGATGACGATGATGACAACACAGGAGATATGGATCTG
CATTTCCAGGATCAATGA

Peptide Sequence

PEP ID

OQU85383
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:4:57855776:57862834:-1 gene:SORBI_3004G228800 transcript:OQU85383 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MWVFYLISLPLTLGMVVVTLRYFAGPAVPRYVVVTVGYAWFCSLSIIILVPADIWQTLTG
SAKGGIGFFWSWSYWSTFILTWAVVPTIQGYEDAGDFTVKERLKTSIHMNLLFYSIVGAI
GLIGLILLLIMHRAWDGGIVGFAMACSNTFGLVTGAFLLGFGLSEIPRNIWKNADWSHRQ
KVAQATSNQMSKRDILRPYMDIIDNMLSQMLREDPSFKPSGGRLGENDMDYDTDDKSMAT
LRRQLRRAHEEYYRCKSEYMTCVMEALKLEDTIKNYERRDANGWKYVSSFRESRSGTLGS
ILDTIEFIWRCILRKQLQKAFAVILGCMSAAILLAEATLLPSGVDLSLFSILIKAVGKQE
VLVQVAAFVPLMYMCICTYYSLFKIGMLMFYSLTPRQTSSVSLLMICSMVARYAPPISYN
FLNLIRLGGNAKTTFEKRMGNIDDAVPFFGRGFNRIYPLIMVVYTLLVASNFFGRVIDFL
GSWKRFKFQREEENIDGLDPSGMIILQKERSWLEQGCKVGEQVIPLARNFNGVNTDIESQ
NVPLVENTVEMKVGATSSRNDGRAGQSKYANNRETIASKYTSIREQNRQSGKAVRKEISP
NSVSLLEERNSEQRSNAGVPPTGVSATWASMKNGFQNFKANMGSKKFLPLRQDPGFVLNS
NVSSPESLDDIFQRLKRRPANVPVDYLDDDDDDNTGDMDLHFQDQ

Transcript Sequence

Transcript ID

OQU85383
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:4:57855776:57862834:-1 gene:SORBI_3004G228800 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

AAACTCCACCGAACGATCCGTGTTCGGCCCACCAGCACCTTCCTCTTCCTTCTTCCCCAG
CCGTGCGCGCTTCTCCACTTCCCCGGAGACAAAAGAGCCCCGCGATCTCCCGGGCCCCAC
CTCCCGCCTGCGCGCCTGCAACACGGAGAAGCTTCCGGTTCCCAGCCGGCCCGGCTCCAC
CGACTCTTCCTTTCCCTCCGGCCGCCGCGGCGTCGAAGCGGATTAGCGGGGAGCGTCGGG
GCGGCGAGATGTGGGTGTTCTACCTGATATCGCTGCCCCTGACGCTGGGCATGGTCGTCG
TCACGCTCCGCTACTTCGCCGGCCCCGCTGTGCCGCGCTACGTTGTCGTCACCGTCGGAT
ACGCATGGTTCTGCTCCCTCTCCATCATCATCCTCGTCCCCGCCGACATCTGGCAGACAT
TAACTGGCAGTGCAAAGGGTGGCATTGGATTCTTTTGGAGCTGGTCCTATTGGAGCACAT
TTATCCTAACATGGGCTGTAGTTCCTACTATCCAGGGCTATGAAGATGCAGGAGACTTCA
CTGTTAAAGAAAGGCTGAAAACTAGCATTCATATGAACCTGCTTTTTTATTCAATTGTGG
GAGCCATTGGCCTTATTGGTCTCATACTACTCTTAATCATGCATAGAGCTTGGGATGGTG
GTATTGTGGGATTTGCAATGGCATGCTCAAATACCTTTGGATTAGTGACTGGTGCTTTTC
TTCTTGGGTTTGGGCTAAGCGAAATTCCAAGAAACATTTGGAAAAACGCAGACTGGTCTC
ACCGCCAAAAAGTTGCTCAAGCTACATCAAATCAAATGTCAAAACGTGACATTTTGAGGC
CTTACATGGATATTATTGATAACATGCTGTCTCAAATGCTGCGGGAGGATCCATCCTTTA
AACCTTCTGGTGGTAGATTAGGTGAAAATGATATGGACTATGATACTGATGATAAATCGA
TGGCCACACTTCGGCGCCAACTCAGGAGAGCTCATGAGGAGTACTATAGGTGCAAAAGTG
AGTATATGACTTGTGTCATGGAAGCCCTCAAACTAGAAGACACAATAAAAAATTATGAAC
GCCGTGATGCTAATGGATGGAAATATGTATCAAGTTTTAGAGAAAGTCGTTCAGGCACAC
TTGGATCAATTTTGGACACTATTGAGTTCATTTGGCGCTGTATACTGAGAAAGCAGCTTC
AAAAAGCATTTGCTGTTATCCTTGGCTGCATGTCAGCTGCTATACTGTTGGCTGAAGCTA
CTTTACTTCCAAGTGGTGTTGATCTCTCTCTCTTTTCTATTCTTATAAAAGCTGTAGGAA
AACAAGAGGTTTTAGTTCAGGTTGCTGCTTTTGTCCCCTTGATGTATATGTGCATTTGCA
CATATTATTCATTATTCAAGATTGGTATGTTGATGTTCTATTCTCTAACTCCAAGGCAAA
CCAGCTCTGTCAGCTTGCTTATGATCTGTTCAATGGTTGCAAGATATGCACCTCCTATTT
CTTATAACTTTCTTAATCTCATCCGCCTTGGTGGCAATGCTAAAACTACATTTGAGAAGA
GAATGGGGAACATTGATGATGCAGTCCCTTTCTTCGGCAGAGGCTTCAACAGGATCTACC
CACTGATTATGGTTGTTTATACGCTATTGGTTGCTAGTAATTTCTTTGGCCGTGTGATTG
ACTTTTTGGGAAGCTGGAAAAGGTTCAAGTTCCAACGTGAAGAAGAGAATATAGATGGTT
TAGATCCCTCTGGAATGATTATTCTACAAAAAGAGAGGTCTTGGCTTGAACAAGGGTGCA
AAGTGGGCGAGCAAGTTATTCCATTGGCAAGGAATTTCAATGGCGTGAACACAGATATTG
AATCACAAAATGTTCCATTGGTTGAAAATACAGTGGAGATGAAAGTTGGGGCAACCTCTT
CCAGAAATGATGGGAGAGCCGGTCAGTCGAAATATGCAAACAACAGGGAGACTATCGCCA
GCAAATACACTTCTATTAGAGAACAGAACCGGCAGTCAGGGAAGGCAGTGAGAAAGGAAA
TTTCACCGAACTCTGTATCTTTGCTTGAAGAAAGAAATTCTGAGCAGCGGTCCAATGCGG
GTGTACCACCAACTGGTGTGTCTGCAACATGGGCCTCGATGAAGAATGGTTTTCAAAATT
TCAAAGCAAATATGGGTTCAAAGAAGTTTCTTCCTTTGCGCCAAGATCCAGGATTTGTTC
TGAATTCAAATGTCTCTTCACCTGAATCTCTTGATGACATATTCCAAAGGTTGAAACGGC
GGCCTGCAAATGTACCTGTGGATTACCTTGACGATGACGATGATGACAACACAGGAGATA
TGGATCTGCATTTCCAGGATCAATGAAATAGGTTGTTATTCTTTTAGGTTTAGAATATGC
ATACACAGAAAAACTAAAAGAATTGTTAGCATTAGATGCTCGAAGGAAGATATAGGATGT
ATAGATCTGATGATTTGGTGTGCTTCCTGGAAGCCAAGACGCCTGCCCGTCTGGAGAACT
ACAAAATGGAAGTACGATATGATGACAGCCTTGCAGAAAGGCTTTAAATTTTCCCAGCAA
GAAGGTTTGGGACTTCTCTCACCTTATTTGAGTCTGTATTGGAGTTGCTGATATGCGATC
CAAGCCGAAGAATGTAAATGTGCACCTACGATTCCATTTGAAGATTAACGTGCCTGGGTT
GTAACCAGTAAAAATGTACTATCAAATATATACTTGATGGGGAGAATGCTCCCAAGTGTT
TTTGTGTTGCAGACG