Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

OQU85268
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:4:55858944:55861531:1 gene:SORBI_3004G208800 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGTCAGTTCAAAATATAAAATGTGAATTTAGTGGGGTCCATTTTTTTCAGATATCTTGT
GATAAAGTGAGAGGTAGCATTAATAAAGTTTGGAGTTCAGAGTGCAATGGCTATACGCAT
CACTTAGTTCAGGAGGGCCTCCAGCTTTTTAACTTAAAGAAGGAAAATGAACCATTTGGT
CTAGAATATCTTGGTGTCATGCAGGACACAATCAGCAAATTGACATATGAAATGCTTCAT
GCAGTGGCTTGCATCGTCAGTCATAACAAGTTTACTTTTGATAAGACTAGGTCTGTAATG
GAAAAGATTGTAAAATCTCACCTTCCAAGTTACTTGGCCAGCTTGGATCAGAAAGACATG
CTATGCCAGCTATTCAATATTTTTACAAATCCATGCAGCTATCGATCTGGTTCTGTGAGG
CTAGTCACACCCGTGTCACCGCAACTTTTGTCTTCTATCAATCGTGCGTTGGATGAGCTT
GAAGGAATGCCTATGCAGGGTCTTGTTGCAATGAATAGGAACATTAGAGGAAAACCGTGT
ACCCCAAAATTTGGATTAATTGCTCGCTCTTCCACAAGAGCACGTATAATCAAAATGGTA
AGGAAAAGGTGCAACAAGATTTTAGCAAAGCTTGAGGAAGGTAATTACCTTCCAAAGAAA
TTAGCAAAGGCAATGTCAGTGGTGAACCTATATCAGAAGCAAAAGCTGAGCAGTGTGAGT
ATTTTGCAGTCAGAGTTCTTCCCCTTTGCAAAAGAAACTATATCTTTGCAGAATGATATC
CTAAATGCTCTTTGGTCACTTCCAAAAATCACACATGAGAAACTGAAATTACTGCGCCCA
ATACTGGATCATGATTCTAAAGTTGAAAGGACGCACTTAAGAGCAGCTTTGAGGAACTAC
TTGACAGAATGTTTGTTTGGATGTGATGATGATCTACCAGATGAGGCCCTCCGAGCCATA
GCCTTTATAAATCAGATTTCTAGACGTCAGCGTGTTGTCTTAACAGAAGAGAGGAAGGAG
GCTGAGGTAGATGCTGTACTGAACTTAAGCAGTCATCTCAAAGCTTTAGCACATTGTTGT
ATAGAAGAATGTTCATGCGAAGAGTTGATTAGCTTAGGGAATGATTGCTGCAATGAGGAT
AACGATTTCATACTTTCTTGGACCAATTACTTCAATTTAAGCTCTGAGCAGCAGGAGGTG
CATGAGCCTTGTCGTTCTGTTAGTTTATTGGGCACTGATATTACGAGAGGGAGTTGCTGG
GGTGAAACTATTGGCGATACACATAATGTCTCTAGAGCTGGTTCCAAATCAGAAGTACTT
AGGAAACATTGTGACAGGGCTGAAGACTCTGGAAGCACTAGGCATTGCAGAGACAATGAA
GCTGTTAACAGTGACATGGAGCCCTATGCAGAGATGTCTGTTGATGCTAACCATTTGAAG
AAGTCAAGATGTTCGGAGGTTACTGCAATCTGTGATGAAACTTCAATATTGGCCCATTCG
ATTATTGGGCAGATTTTAGACGAATGGTTGCCTACGGAGAACAATGAAGTGGACAAGCTG
ACTAGAGGCCATGTTGGAGGGGGATTGATGCCTCAAGCTCCCCAAGACGATGATAATAGG
CCCGCTAATTCAGCAGAGGCCATAGAAGGTGACATTTTTATTCGTGCAGTGGAATGTGTC
TTGCCTAATTTGCCAAAAAGTTGCATAGACGAAGTCAAGAGGCTAATGAGCTGA

Peptide Sequence

PEP ID

OQU85268
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:4:55858944:55861531:1 gene:SORBI_3004G208800 transcript:OQU85268 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MSVQNIKCEFSGVHFFQISCDKVRGSINKVWSSECNGYTHHLVQEGLQLFNLKKENEPFG
LEYLGVMQDTISKLTYEMLHAVACIVSHNKFTFDKTRSVMEKIVKSHLPSYLASLDQKDM
LCQLFNIFTNPCSYRSGSVRLVTPVSPQLLSSINRALDELEGMPMQGLVAMNRNIRGKPC
TPKFGLIARSSTRARIIKMVRKRCNKILAKLEEGNYLPKKLAKAMSVVNLYQKQKLSSVS
ILQSEFFPFAKETISLQNDILNALWSLPKITHEKLKLLRPILDHDSKVERTHLRAALRNY
LTECLFGCDDDLPDEALRAIAFINQISRRQRVVLTEERKEAEVDAVLNLSSHLKALAHCC
IEECSCEELISLGNDCCNEDNDFILSWTNYFNLSSEQQEVHEPCRSVSLLGTDITRGSCW
GETIGDTHNVSRAGSKSEVLRKHCDRAEDSGSTRHCRDNEAVNSDMEPYAEMSVDANHLK
KSRCSEVTAICDETSILAHSIIGQILDEWLPTENNEVDKLTRGHVGGGLMPQAPQDDDNR
PANSAEAIEGDIFIRAVECVLPNLPKSCIDEVKRLMS

Transcript Sequence

Transcript ID

OQU85268
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:4:55858944:55861531:1 gene:SORBI_3004G208800 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

TTAAGGTGTTAGTGAAATATGTGAAGTAATCAATATTCCATTTTTCCGTGTATAAATTTT
ACACAAGAATAAATCAGGTGTGTACTGATTACTGAAAGGAGTTTATTTCAATAATGCTTA
AAACTTATGGAAGAGCATGTTCTAGCGCCCAGTTAGGAACTATTGCACGTGGTACTTTTG
TGGTATGTATGGTGTTTTTTGAACATGGTTCAATTTAATTGCATCTCTGCAAAAGTGTTT
TTGTCATTGCTATATAAATTTTCTTTACTCAGCTTACAATCGCTTTGGTACCATTTCTCA
GTTTCCTGATTTATACTAGTTAATATAACAGCAATTTTGGTTGCATTATGTCAGTTCAAA
ATATAAAATGTGAATTTAGTGGGGTCCATTTTTTTCAGATATCTTGTGATAAAGTGAGAG
GTAGCATTAATAAAGTTTGGAGTTCAGAGTGCAATGGCTATACGCATCACTTAGTTCAGG
AGGGCCTCCAGCTTTTTAACTTAAAGAAGGAAAATGAACCATTTGGTCTAGAATATCTTG
GTGTCATGCAGGACACAATCAGCAAATTGACATATGAAATGCTTCATGCAGTGGCTTGCA
TCGTCAGTCATAACAAGTTTACTTTTGATAAGACTAGGTCTGTAATGGAAAAGATTGTAA
AATCTCACCTTCCAAGTTACTTGGCCAGCTTGGATCAGAAAGACATGCTATGCCAGCTAT
TCAATATTTTTACAAATCCATGCAGCTATCGATCTGGTTCTGTGAGGCTAGTCACACCCG
TGTCACCGCAACTTTTGTCTTCTATCAATCGTGCGTTGGATGAGCTTGAAGGAATGCCTA
TGCAGGGTCTTGTTGCAATGAATAGGAACATTAGAGGAAAACCGTGTACCCCAAAATTTG
GATTAATTGCTCGCTCTTCCACAAGAGCACGTATAATCAAAATGGTAAGGAAAAGGTGCA
ACAAGATTTTAGCAAAGCTTGAGGAAGGTAATTACCTTCCAAAGAAATTAGCAAAGGCAA
TGTCAGTGGTGAACCTATATCAGAAGCAAAAGCTGAGCAGTGTGAGTATTTTGCAGTCAG
AGTTCTTCCCCTTTGCAAAAGAAACTATATCTTTGCAGAATGATATCCTAAATGCTCTTT
GGTCACTTCCAAAAATCACACATGAGAAACTGAAATTACTGCGCCCAATACTGGATCATG
ATTCTAAAGTTGAAAGGACGCACTTAAGAGCAGCTTTGAGGAACTACTTGACAGAATGTT
TGTTTGGATGTGATGATGATCTACCAGATGAGGCCCTCCGAGCCATAGCCTTTATAAATC
AGATTTCTAGACGTCAGCGTGTTGTCTTAACAGAAGAGAGGAAGGAGGCTGAGGTAGATG
CTGTACTGAACTTAAGCAGTCATCTCAAAGCTTTAGCACATTGTTGTATAGAAGAATGTT
CATGCGAAGAGTTGATTAGCTTAGGGAATGATTGCTGCAATGAGGATAACGATTTCATAC
TTTCTTGGACCAATTACTTCAATTTAAGCTCTGAGCAGCAGGAGGTGCATGAGCCTTGTC
GTTCTGTTAGTTTATTGGGCACTGATATTACGAGAGGGAGTTGCTGGGGTGAAACTATTG
GCGATACACATAATGTCTCTAGAGCTGGTTCCAAATCAGAAGTACTTAGGAAACATTGTG
ACAGGGCTGAAGACTCTGGAAGCACTAGGCATTGCAGAGACAATGAAGCTGTTAACAGTG
ACATGGAGCCCTATGCAGAGATGTCTGTTGATGCTAACCATTTGAAGAAGTCAAGATGTT
CGGAGGTTACTGCAATCTGTGATGAAACTTCAATATTGGCCCATTCGATTATTGGGCAGA
TTTTAGACGAATGGTTGCCTACGGAGAACAATGAAGTGGACAAGCTGACTAGAGGCCATG
TTGGAGGGGGATTGATGCCTCAAGCTCCCCAAGACGATGATAATAGGCCCGCTAATTCAG
CAGAGGCCATAGAAGGTGACATTTTTATTCGTGCAGTGGAATGTGTCTTGCCTAATTTGC
CAAAAAGTTGCATAGACGAAGTCAAGAGGCTAATGAGCTGAGCTAGCAAGTAGTACGTGA
GAACGACCTGCAATGGAACCTATGGACCCGATAAATTTTCGATTTTGTTTCTTCAAAAAA
CTTTATCAGACCTGTGTATTCTGTGGTTGTGACTAGGCACTTCCGTTTGTGGCAAGCTTT
TCTGCATATACTTGATGCTATCGGGGGTGTAGTGGTAATTGTGCATCCCGTCATCGGAAA
TATGAACGTGAAGCTAAGCTCAAGCAATGGCAAACCATGGTCTCTGCTGTGAATCCACTA
TATTCATGTCCAGTGCAACTAGTTCATC