Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

OQU85253
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:4:55595067:55600054:-1 gene:SORBI_3004G204400 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGCGCCCCAAAGCAGCTGCCGAGGCGGCGAGGACCAAACCCTAGCGTCCTCCGCTGCC
GCTTTCCCTCGCCCCCCGGCGTTGGCGCCTGCGCCGGTGGTGAAGACGACGACGACGACG
GTCGCCGACCTCACGGACGTCATCCTCCAGGCCATCCTCCTCCGCCTCACCCCCGCCGAC
CTCCTCCGCGCGGCGCTCGCCTGCCACCGCTGGCGCCGCGCAGCCACCCGCGTCCTCCCA
CGCGTGCCGCCGCTCCTCGGCTACTTCTTCCACCCCAGGAACCCCGCCAAGCCGCCCCCC
AAGCCGACGACGGACAAGACCCACTACCCTGCCGTCTTTCTCCCGCTCGACGCCTCCTCC
CCGCGCCTCTCCCTCGACCTCACCACGGGCGCTGCCAGCAGCCTCTCCATCCAGGACGTC
CACCTCGGCCTCGTCCTCCTCCTCCCGCTCTCGCGCCCCAAGTCGCTCCTGCCCCGCATC
CTCGTCGTCGACCCGGCGTCGCGCCGCCGCGTCCTGCTCCCGCCGCCACCGCGCGACGAC
GCGCTGCCTGACGATCGCTGGCGCCGCGACAGGTGCGTCATCGGCGTCGCCGTTCTCGCG
CGCGCGCACCCCACCAGGCTCACCTTCGACGCCGTCTGCCTCACCATCGACGGCGACCGC
CCGCGCGCCTGGGTCGCGTCCGTCCGCGAAGGCAACTGCGCCTGGCGCGCGTTGCCGAGG
GCCGAGGGGGTCGTCGTGGACTTCGACCCGTGGTGCTTCGAGGCCCGCTGCGTCCACGCC
GCTGGGAACATCTACTGGCACATCTGCAACTCCAGCCGCCGCTTACTCCAGCTGGATCCT
TGCACGCTGGAGTTCTCGTTCATGCCCGTGCCTGCTGCCCTGGGGGATTGCTTCAACAAG
TACCGCATTGGAGAGACGCCGGAGGACGGTCGTCTGTGCATGGCATCGATCATTGGCGAA
GAAAGTCTGCAGATTTGGGTGCGTGGAGAGGCCAGTAGGAGTGACAGGGGGTGGTTGCTA
GAGAGGGAGATTTGCATGACCAAAGTGCTCGATACTGTGCCTGGGCTACCCAAGGACAGC
ATGATGCGGATGCTTTGCACCTGGCTCAGCGACATGGACTATGCCCGCACCGGGAAGGTG
TTCATCTGTACATGGGGATATGGGCGCTACGCCTTCCATCTGGAGACTGGCAAGCTGGAG
CGCTTGGTGATGAAAGATGGCAAGGAGCATGGAAACCCTATCTATGCCTACACCTTGGCC
TGGCCGCCTGAGTTCCTCACTCCAAGAAACTGA

Peptide Sequence

PEP ID

OQU85253
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:4:55595067:55600054:-1 gene:SORBI_3004G204400 transcript:OQU85253 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MAPQSSCRGGEDQTLASSAAAFPRPPALAPAPVVKTTTTTVADLTDVILQAILLRLTPAD
LLRAALACHRWRRAATRVLPRVPPLLGYFFHPRNPAKPPPKPTTDKTHYPAVFLPLDASS
PRLSLDLTTGAASSLSIQDVHLGLVLLLPLSRPKSLLPRILVVDPASRRRVLLPPPPRDD
ALPDDRWRRDRCVIGVAVLARAHPTRLTFDAVCLTIDGDRPRAWVASVREGNCAWRALPR
AEGVVVDFDPWCFEARCVHAAGNIYWHICNSSRRLLQLDPCTLEFSFMPVPAALGDCFNK
YRIGETPEDGRLCMASIIGEESLQIWVRGEASRSDRGWLLEREICMTKVLDTVPGLPKDS
MMRMLCTWLSDMDYARTGKVFICTWGYGRYAFHLETGKLERLVMKDGKEHGNPIYAYTLA
WPPEFLTPRN

Transcript Sequence

Transcript ID

OQU85253
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:4:55595067:55600054:-1 gene:SORBI_3004G204400 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGCGCCCCAAAGCAGCTGCCGAGGCGGCGAGGACCAAACCCTAGCGTCCTCCGCTGCC
GCTTTCCCTCGCCCCCCGGCGTTGGCGCCTGCGCCGGTGGTGAAGACGACGACGACGACG
GTCGCCGACCTCACGGACGTCATCCTCCAGGCCATCCTCCTCCGCCTCACCCCCGCCGAC
CTCCTCCGCGCGGCGCTCGCCTGCCACCGCTGGCGCCGCGCAGCCACCCGCGTCCTCCCA
CGCGTGCCGCCGCTCCTCGGCTACTTCTTCCACCCCAGGAACCCCGCCAAGCCGCCCCCC
AAGCCGACGACGGACAAGACCCACTACCCTGCCGTCTTTCTCCCGCTCGACGCCTCCTCC
CCGCGCCTCTCCCTCGACCTCACCACGGGCGCTGCCAGCAGCCTCTCCATCCAGGACGTC
CACCTCGGCCTCGTCCTCCTCCTCCCGCTCTCGCGCCCCAAGTCGCTCCTGCCCCGCATC
CTCGTCGTCGACCCGGCGTCGCGCCGCCGCGTCCTGCTCCCGCCGCCACCGCGCGACGAC
GCGCTGCCTGACGATCGCTGGCGCCGCGACAGGTGCGTCATCGGCGTCGCCGTTCTCGCG
CGCGCGCACCCCACCAGGCTCACCTTCGACGCCGTCTGCCTCACCATCGACGGCGACCGC
CCGCGCGCCTGGGTCGCGTCCGTCCGCGAAGGCAACTGCGCCTGGCGCGCGTTGCCGAGG
GCCGAGGGGGTCGTCGTGGACTTCGACCCGTGGTGCTTCGAGGCCCGCTGCGTCCACGCC
GCTGGGAACATCTACTGGCACATCTGCAACTCCAGCCGCCGCTTACTCCAGCTGGATCCT
TGCACGCTGGAGTTCTCGTTCATGCCCGTGCCTGCTGCCCTGGGGGATTGCTTCAACAAG
TACCGCATTGGAGAGACGCCGGAGGACGGTCGTCTGTGCATGGCATCGATCATTGGCGAA
GAAAGTCTGCAGATTTGGGTGCGTGGAGAGGCCAGTAGGAGTGACAGGGGGTGGTTGCTA
GAGAGGGAGATTTGCATGACCAAAGTGCTCGATACTGTGCCTGGGCTACCCAAGGACAGC
ATGATGCGGATGCTTTGCACCTGGCTCAGCGACATGGACTATGCCCGCACCGGGAAGGTG
TTCATCTGTACATGGGGATATGGGCGCTACGCCTTCCATCTGGAGACTGGCAAGCTGGAG
CGCTTGGTGATGAAAGATGGCAAGGAGCATGGAAACCCTATCTATGCCTACACCTTGGCC
TGGCCGCCTGAGTTCCTCACTCCAAGAAACTGACTTTCTGGTAATTTCTATAGCTTTGTT
TATAAGAAGTTTTGCTTGATGAAATGCTCCATTAACTATTTTGCTTTATGATTAATCTGT
ATGCTCTGGTGCATGCATATTTTGTCATAACATCTTGCACATGTAGAGGGAGTGTATCCT
TTTCTTTTTGGATTTGTTATATAGTTGTTACTCTCACTTACTAGCAAAATTTCAGAACAC
GGAAATTAGCACATAGTTTCTAGAAAGCTTGATGATCATCAGTTTGGTGAATTGTGTTCC
CTCCGGTAGCTGTAGGATGTGGTATATACTTATAATTGGTACAAACTAATTTCTCAATAT
GTTCTATTATATACTTAGGTACCAAATTTGAAATTTGTGTTGGACATCGCAGTATGATTC
AACACTCCAGGTGGACTTCCTTTTGAATTGTTGGTATTGGTAATATTTTTATTGTGTGTG
AATGAATTTGAGGAACTGCTTTGATTATTCATTATTTCATTTCTCAGTTGTCAACTTACT
TCACAAATTTTGAGTACTTCAGGCTTTGTTGTAACTTGCACTTGTTCAATTGAGCCTTTT
ACGGGTTTTAACCATAAAAAGGGATACCCAAATCGGAGCAATAAAAAACGCAAAAGACGA
ACTAAGCCATCCACCATCGCCAGGACGCAGGTCCCAGCACATCTGTCTCCTCGATCTCGG
GCCCAAATCGCGGCTCGCCCGACCCCGTGGCCTCGGGCGCGAGTTCCGTCTCGCCCGACC
CCCTGGGGCTCGGACGCAGACACCGCCTCGCCCGACCCCCTTGGCCTCGGGCGTAAGTTC
CGTTTCGCCCGACCCCTCCAGGGCTCGGGCGCCAACGCCGCTTTGCCCAACCAGAGCAAG
GCTTCCAGCTCACGGCGCCCGTACCCACGAAGTGACAGGCGCAGTGACACCCATATCGTA
GCAGGGCATGATGGTAACTATTCCAACCACCCTGAACACTGCAACCTTACCTCTTTCACT
GTGCGACCTTACCTCTTTTACTGTGGTATACCGCCTCACAGTAAAAGAGGAATGGGAGAG
GTTAATCAACGCCACTATTTGTTGTCTTCTCTTACTGTTAACATGACAGGCTGCAGTATC
GCCGACCCGACCCCCACGACTCCAACAGGGCTCGGTAACCCTCCACAGGAGCAACCATAC
TGTCAACCATACTTCAAGGACAGGATGGGCAAGTTGCTACAGGGTCGGGACTGTTACTCC
TCCACTCAGCAGAAGAAATCTCCAATCATTCATGTAAAACCCTGCCTCCCCTTGAGGCTA
TAAAAGAGGAGCCAGGGGTCCTAGCCGAGACATGTTTTTGACAACAAATCCAAACACACA
GCACACACACACCACGACTCCAAGCCAATCCACCAACAAGTAGCAACCAGCGCTTTGTCC
ACCACACAAAGTCGAGACCTGGGACTTAGCCCTCTCTCGCAACCTGCTTGTACTCCCCTA
CTACAAGCACCTTTGGGTGCAAGGCAATACAGACCCCCGATCTCACTGGACGTAGGGCAT
TCCTGGCCCGAACCAGTATAAATCCTCTGTGTTTCACTTGCATCACCATCCAAGTTTAGG
TAGTCACGCATACTTATACTCGTTTGTGTCTAGACGTCGACATATACCTTGTGTGCCTAG
ATACTATAAAATAAACAACACAAAGGAATACTATAATTGAAACCTCACATTCTGTAGAAC
TCCGCAACAAGAAGCATGGAGACCATCTATGCCAACAATCAATTTTTTATGTGTTTGTGT
CCTGGGTGATTTGATGCATGCACAGTAGTTTGTAAGCTGGTTGCAGACTGCAGTATTCCC
TTGTTTCTGATGGTTATCATCTACTGGCTACATAAATGTGGTGACAGATCTTTGTATATA
TAGTAGGAGCTAGTTGTTGAAATTAGAATATGCCATCCAATGATCTAAGGTATTTTTCAG
GCGCCTATTAGAAGGATACTTGATGATCCTACATTTGATGTTTTATCAGTTATGTACCTT
GCAGTGGCTTTGGTAGGCTGTGTCATTATTTGAACAAATGAAATGCTTTTAATGTCTTTG
TTTTGTGTTTAGGAACCTGTTTAATACTTTGTTTTTACGTAGCAGTTTTGTTCCTTAGAT
TTGGGTTTTCCAAACAAAAAGAAGTTTTATGTTTACTACTAATAGCTTTTAGGCTAGGTT
TTGAATCTGCAGATCTGTTTGACTTTGATTATTGTTGCTTGAATCCAAGAAGTAGTTGTT
TTTAGTTTGTATGCTCTGTTGCTTAAATAGTGGTTTCGAATTTTTAGTTTGATGAGGTCT
AGTTTTAGTTTAAATCTACAACTGAGCCTCTTTGCTTATGCTAATTTAGTTTAACCAAAT
TTCACAATATTTAATAAACACAAGCAACCAAACTTTATATATTTGCTAGCAGTCTAGAAT
AGATAACTATCTTTATACCTGCTTCAGTCTTGCCAACTTTATATATTTGCTACAGAGTTT
CAACTCTTGTGTGATATTATGCATTTCATGTGTCCGAAATCTGCTAGATACTAGTACTTG
TGTATTTTCAGGAGTTCTATAGTTTGAAACGGTACTTTTGTACCTTTTATTACGTATAAG
AATTACGTGTTGATATGTTAGGCATTGTCATCTAGCATTTAATAATTGCTGTCATTAATT
ATAATGAAGGATACATTACCACCTTAACGTTTGATAATAGTTAGCCACAAATAATTGTGA
ATCCTTCCATTTTCTGTACCTTATTGTGTTTTTGTTTGCCTTCTTTTGGATCTTCTTTCA
GAAATTTAGTTCAGCAATGCCCATTTTTGACCTGGAACTTAGAAATGGAAGGTCTTTACA
CAAAACTAGAGAATCTGTGTACCACTTTGATGATTCTTAACTCTTAAGCTATGACTGATT
GCTCCTTCAATTTTTACAAGAGTTACGGTTCAATTCTCTTATCTTTGCAATTGATTAGCG
CAATAGTGCTGGGATTTGACTATTTTACCAATTTGTTTACTTATAGATGGTTTTATTTTC
TTATCTTTGCATGAATTTCTGCTTGTGAACTTTAAGCATCACATATACCTGGGATCCATT
TTCTGGTTGCAAGCTAGTTTGGCTTATTTACCAATTACACTTGTTGTTTTATCATCAAAA
TCCAATCTGTTTGATTCCTAGGCAGTTGGAATTGTGCTAACAACTATTTCTTCTTTATGA
TTCAGGTTGTTGACCAGTGAGAGAAGATAACAGTGACGCAAATCAGCTGACCTCTTTGGT
TTCTGGATTACTAGTGCCGTGCCATCTTCACAAAAACTCTTTGATCCGTACTGTATGAAT
TAATGCAGACAAAGCTATTGTTGAACTTGTCTTTTCGCATTTTCGGACTAAGATGGCATT
CTGAACACACTAGTAGGGTGTACCACGTTATGCTGGTTCCAGGCAAAAAGTATATGCCTT
CTTGTCATGAGATATTTGCCCCATTAGATTAATATGCCATTTTGAAGACATCAGGTGAGG
AATGTCTCGTGTTGTGCTGTTACAGCTGCTGAACCGTGGATGGTTTTGTTCGTCACAAGA
CTAGTACCATCTATCATGTTATATCTGTTTTGCGTATCATGTGATGTGAGTTCATCATTT
TGACCTTTTGTGGTGCCACTCTGATTCTTAACTGCATACACTTCCTAGATTAAACTGTGT
CACCATCT