Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

OQU85212
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:4:54470458:54476603:1 gene:SORBI_3004G192900 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGCGGACTCCCAGGTGAAATTCCTCTCCCTGTACCCGCCGCCGCCGCCGGGCGCTGTT
CGAGCTGATCGGGGGGGTTTTCTCGTGCAGGTGGAGGCGATGAAGAAGGCGTACGCCGGG
ATCATGCTCAACATGGCGCAGGAGTCGGCGGCGCGGGTGCTGGCGGCGGAGCGGCGAGCG
GCGGCGCTCGCGGCCGGGCTTGAGGCCGCCAAGGAGGATGGCGTCGCCGCGCTCCTGCGG
CTCAAGGCCACCATGGAAGCCAGGATAAAAGAGAAAGAACTGGAAACTTCGGTGCATGTT
AAGAAGATCAAGGAACTGGAAGAGCAATTGCATGGTTCACAAAATGCTATGGCCTCGCTT
AAGGTTGAGCTGCAGAGGGCAAATACTGAATTAGATCTGACAAGGAAAACTTTAGCTGAT
GAAAGAATAAATAGCCTTCCCACATCCAATAATGTTTATTCTAATAAAAATGCCAGCCCT
CGTTCTAAGATGCATCAAAAGGGAGTATCATTGAAGAATAAAAAGGCTGCAGACAATAGT
GATGACACTTGCCTTGTTCCGATAAACAAGGAGGAGAATGAAGCAGTGGAAAACTTGGAG
GACATGGATCGTCGCAGCCCTGATCTGCCATCATTAATGGAAAGAAATAAGAAACCAAAG
TTCTATCATAATGGGTGTACACAGCGTATTCATGCACTTAAACAGCAGACTCAAAGTACA
GATGCATTCCTGAAGCAAAATCAGAAGCAGGCCACTGCATTAAATAGCCGCTCAAAGGCC
AGAAAGAACAATGCTGATAAAAACCCATGCCACACAAGGTCCATCATGGAACAGATACTT
CAAACGAAATTTCTGGGTAAGTTCAAGCGCAAGAGAGGCAGAAGAAGCAGGCCTAGTTAT
AAGCATGATAATTCCAGTGAGCACGAGGAAGCGGAATATAAGTTCTCTGATAGATCTGAA
TCTGATGGAAATGGCTGCTTGCTGCTACTTAAGGCATTTGAGGATCTTTCACCTCCCAAG
ATGTCTGCTGAACATGATGGGGAGGCCTTCACTGACCAGAAGGAAGACTTGAAAATGAAT
AGGAGGGATGCTGAGTTAAGCCGCTGTACTGCTTTACCAGAACTGATTGATGTACTTGCA
GTCAACAGTGTGCAAATGAAAAGAAGAAAAAGAACAAAGACTGTCAGGGTTTTGGAAGAT
GATTTTTCTGAAACCAAAAGTGTTCCTGAGCCAGCTAACACCCAGCTTAGGACCAGTGAG
AAAAGCATGTCTGGTAATCAATTGATCTCTGAGATGACTGAGAATCGCTCTGATACCCCC
ACCAGAAACAGCGGCCCTTTCTTGAAATGTGCTACTGCAAACTTAATGCATCAGACTGAT
GCTGGTAATGGTCAATTTGATCCTGAAATCACCTCTTCAGTGTTCCTTCAGTCGACCAAA
AGTGAAACTACAGATTATGGTAACTTGGTGGTGGATGAGCAGGAGCTGATAACACTAAAC
AATAATACTGCAAGCTTGAAAGAAGTTAATGAGGATGGAAGCTGCAGTTTGGCTTCACCT
AAGACTGATGCTTTGACTCTTAGCTCCCTAGACAAGGAAAATTTGAAGGCGTCTTCTGGA
CTTCCCGGACAAACGTTAGAGAAACATGATATTTCAGTTGGCAGCTCCCTGAACAAAAAA
GAGCATACAAAGGCATCTTCTGGAGCTTCCATGCAAGCTGAAGGTGCCAGACATATCAAA
TACACATTCAATCGCAGAAAGCGCAAGGGTATGTCTATTGACAGCACCCCTCAGCGTGCT
GTCCCTTTGGAGAGCAGTGACCTGTGTAGCCCAACTAACAAGCAAAAGCTTCATCCAGAT
CATGTGGAACAGGATCATTTGATAGATTCTCCACAAGGCGACAGTCAACTAGCTCAGGTT
GCCGAACAGCTCATTTTGTTGTCAGAGCATGTGTGA

Peptide Sequence

PEP ID

OQU85212
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:4:54470458:54476603:1 gene:SORBI_3004G192900 transcript:OQU85212 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MADSQVKFLSLYPPPPPGAVRADRGGFLVQVEAMKKAYAGIMLNMAQESAARVLAAERRA
AALAAGLEAAKEDGVAALLRLKATMEARIKEKELETSVHVKKIKELEEQLHGSQNAMASL
KVELQRANTELDLTRKTLADERINSLPTSNNVYSNKNASPRSKMHQKGVSLKNKKAADNS
DDTCLVPINKEENEAVENLEDMDRRSPDLPSLMERNKKPKFYHNGCTQRIHALKQQTQST
DAFLKQNQKQATALNSRSKARKNNADKNPCHTRSIMEQILQTKFLGKFKRKRGRRSRPSY
KHDNSSEHEEAEYKFSDRSESDGNGCLLLLKAFEDLSPPKMSAEHDGEAFTDQKEDLKMN
RRDAELSRCTALPELIDVLAVNSVQMKRRKRTKTVRVLEDDFSETKSVPEPANTQLRTSE
KSMSGNQLISEMTENRSDTPTRNSGPFLKCATANLMHQTDAGNGQFDPEITSSVFLQSTK
SETTDYGNLVVDEQELITLNNNTASLKEVNEDGSCSLASPKTDALTLSSLDKENLKASSG
LPGQTLEKHDISVGSSLNKKEHTKASSGASMQAEGARHIKYTFNRRKRKGMSIDSTPQRA
VPLESSDLCSPTNKQKLHPDHVEQDHLIDSPQGDSQLAQVAEQLILLSEHV

Transcript Sequence

Transcript ID

OQU85212
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:4:54470458:54476603:1 gene:SORBI_3004G192900 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

CTCCACTCCAACGGACGCAAAGCAACCAGTGAAAAGACGAGGCCGGGGCGCAGCAGCGCA
GCGGCTGCCGCGCCGCGCCCACCTCCCTCTCCGCCTTTCCGTTTCCCACACCTCTATTGC
AACCGCCACAGCCCCCCCTAGCATCACCAGCAACAACCAACTCCCCCCCCCCCCCCCCCC
CCCCTCGACCCCTCCTGTCCTCCCCCAATCTCTTTCCCGCTCCAAAATGGCGGACTCCCA
GGTGAAATTCCTCTCCCTGTACCCGCCGCCGCCGCCGGGCGCTGTTCGAGCTGATCGGGG
GGGTTTTCTCGTGCAGGTGGAGGCGATGAAGAAGGCGTACGCCGGGATCATGCTCAACAT
GGCGCAGGAGTCGGCGGCGCGGGTGCTGGCGGCGGAGCGGCGAGCGGCGGCGCTCGCGGC
CGGGCTTGAGGCCGCCAAGGAGGATGGCGTCGCCGCGCTCCTGCGGCTCAAGGCCACCAT
GGAAGCCAGGATAAAAGAGAAAGAACTGGAAACTTCGGTGCATGTTAAGAAGATCAAGGA
ACTGGAAGAGCAATTGCATGGTTCACAAAATGCTATGGCCTCGCTTAAGGTTGAGCTGCA
GAGGGCAAATACTGAATTAGATCTGACAAGGAAAACTTTAGCTGATGAAAGAATAAATAG
CCTTCCCACATCCAATAATGTTTATTCTAATAAAAATGCCAGCCCTCGTTCTAAGATGCA
TCAAAAGGGAGTATCATTGAAGAATAAAAAGGCTGCAGACAATAGTGATGACACTTGCCT
TGTTCCGATAAACAAGGAGGAGAATGAAGCAGTGGAAAACTTGGAGGACATGGATCGTCG
CAGCCCTGATCTGCCATCATTAATGGAAAGAAATAAGAAACCAAAGTTCTATCATAATGG
GTGTACACAGCGTATTCATGCACTTAAACAGCAGACTCAAAGTACAGATGCATTCCTGAA
GCAAAATCAGAAGCAGGCCACTGCATTAAATAGCCGCTCAAAGGCCAGAAAGAACAATGC
TGATAAAAACCCATGCCACACAAGGTCCATCATGGAACAGATACTTCAAACGAAATTTCT
GGGTAAGTTCAAGCGCAAGAGAGGCAGAAGAAGCAGGCCTAGTTATAAGCATGATAATTC
CAGTGAGCACGAGGAAGCGGAATATAAGTTCTCTGATAGATCTGAATCTGATGGAAATGG
CTGCTTGCTGCTACTTAAGGCATTTGAGGATCTTTCACCTCCCAAGATGTCTGCTGAACA
TGATGGGGAGGCCTTCACTGACCAGAAGGAAGACTTGAAAATGAATAGGAGGGATGCTGA
GTTAAGCCGCTGTACTGCTTTACCAGAACTGATTGATGTACTTGCAGTCAACAGTGTGCA
AATGAAAAGAAGAAAAAGAACAAAGACTGTCAGGGTTTTGGAAGATGATTTTTCTGAAAC
CAAAAGTGTTCCTGAGCCAGCTAACACCCAGCTTAGGACCAGTGAGAAAAGCATGTCTGG
TAATCAATTGATCTCTGAGATGACTGAGAATCGCTCTGATACCCCCACCAGAAACAGCGG
CCCTTTCTTGAAATGTGCTACTGCAAACTTAATGCATCAGACTGATGCTGGTAATGGTCA
ATTTGATCCTGAAATCACCTCTTCAGTGTTCCTTCAGTCGACCAAAAGTGAAACTACAGA
TTATGGTAACTTGGTGGTGGATGAGCAGGAGCTGATAACACTAAACAATAATACTGCAAG
CTTGAAAGAAGTTAATGAGGATGGAAGCTGCAGTTTGGCTTCACCTAAGACTGATGCTTT
GACTCTTAGCTCCCTAGACAAGGAAAATTTGAAGGCGTCTTCTGGACTTCCCGGACAAAC
GTTAGAGAAACATGATATTTCAGTTGGCAGCTCCCTGAACAAAAAAGAGCATACAAAGGC
ATCTTCTGGAGCTTCCATGCAAGCTGAAGGTGCCAGACATATCAAATACACATTCAATCG
CAGAAAGCGCAAGGGTATGTCTATTGACAGCACCCCTCAGCGTGCTGTCCCTTTGGAGAG
CAGTGACCTGTGTAGCCCAACTAACAAGCAAAAGCTTCATCCAGATCATGTGGAACAGGA
TCATTTGATAGATTCTCCACAAGGCGACAGTCAACTAGCTCAGGTTGCCGAACAGCTCAT
TTTGTTGTCAGAGCATGTGTGATCAGAGTTTTGATACATAAAGCGGAAGAAAGGACTGGC
TTGGTGACCTAATATTTAGGAGAGATAAGTGAATTTTGTAATAGTCTAAATCCATTTGAT
TTCTTCCCTGGGTGCGTAGGAGAGTTCCGGTGGCGACAACAGAGGTATCAAGGAAGCAGC
TCAACTCGAGTGTTGTTACTGTAGCAGAGTGTATAGATTTAGCAGTAAGTTCAACTGTTA
TTTAGTTGATGACATATGTTAGTGTTTTAAGTAGGTTATAAGTTTTTAGTTATCGTTGTG
TAATCGTATTAATTATCGAGTCATTAGAATTCAAAAGGGAAAGAATTGCTCCCTGCACAG
ATGTATTTAA