Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

OQU85197
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:4:54286977:54291710:1 gene:SORBI_3004G190800 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGTGGATGACAAAGAAGCTTGCCATCACGGTTCTGCTCATGCTTACTTCTCTGCTGACA
GCACGGTATTTGATAGAGCACAGTGCGAATTCGGGGATATCTCGGTATCAAATCCTCCAT
CTGGTTCACCTGGACTGGTTCAAGAGCCCAGCGGATGCACGAGAAACCACCACTCTGGAA
GTAGCAGTAGTAACAACAGCAGATGCTCCTCCAGCTTCAAACAGCTCGGATTCCAGAAAC
TCCTCCCCTGAAGTGTTTCAGTGGCTATACACATGGAACCAGATGAAGCAGTTAGCCAAC
ATCACCAACGGCCTTCCTCATGCGAGCGAGGCGATCAGCGATGGGAGAACTGCATGGGAA
AACTTGACAGCATCAGTTCAGAATGCAAGCTCTCAGCACAGAGAGAAAGAGAGACTCTGC
CCGTACTCAATTCGCAGAATGGATGCTTCCAAGTCGGAGAATGGCATCTTTACCATTGAT
GTACCCTGTGGGCTGATTGTAGGTTCTTCAATAACTCTTATAGGAACTCCTGGAGTACTC
TCTGGTAACTTCTGGATTGATCTTGTTGGGACGGCACTTCCAGGGGAATCTGAAAAGCCT
ATTGCACTGCATTACAATGTCCGTCTGAATGGCGACAAGGTTACTAAAGATCCAGTGATA
GTGCAGAATACCTTCACCGCAAACAATGGCTGGGGGGTTGAGGATCGCTGTCCCAGCACT
AACTATAGCAATGCAACTGAAGTGGAAGATCTAGAGAGATGTAATGCCATGGTGGGCACA
GAAGAGGACATAAATAACTCAAAACATCATACAGCTGCCAAACATGGAGAGCCAAGCAAG
TATTTTCCATTTAAACAGGGATACCTTGCTATTGCAACACTGCGTGTAGGATCGGAGGGT
ATCCATATGACAGTTGATGGGAAACATGTCACTTCATTTGCATATAGGGCGGGTTTGGAA
CCATGGTATGTAACTGAAGTAGGAATTTCTGGTGATTTCAAACTTGTAAGTGCGATTGTA
AGCGGCTTGCCCACATCAGAAGACTTGGAGAACTCTAATATTGAAGCGTTGAAGTCACCA
CCTATTCCAGACGACAAAGATGTAGACCTTCTGATTGGCATCTTTTCAACAGCAAACAAC
TTCAAGCGTAGGATGGCAATTCGAAGGACATGGATGCAATATGACGCTGTGCGCCAAGGA
GCAGTAGCAGTCCGATTTTTCGTTGGCCTGCATACAAACCTAATGGTAAATGAGGAACTC
TGGAATGAGGCACAAACGTATGGTGACATCCAGGTGTTGCCTTTTGTTGATTACTACAGC
CTGATAACATGGAAGACACTAGCAATATGCATTTATGGGACCAGTTCACTATCAGCCAAG
TATCTGATGAAAACAGATGATGATGCTTTTGTCCGTGTAGATGAGATCCAATCCACAGTA
AAACAGCTTAATGTCAGCCATGGGCTACTTTATGGTCGCATAAATTCTGATTCCAGTCCC
CACAGAAATCCTGAAAGCAAATGGTACATAAGCGAAGAGGAATGGCCTGAAGAGAAATAC
CCACCATGGGCTCATGGACCAGGATATGTAGTTTCACAAGACATTGCAAGGGCAATCAAC
AATTGGTATAAAGCAAGTCGCTTAAAGATGTTCAAACTAGAGGATGTAGCAATGGGCATA
TGGGTAAATGATATGAAGAAAGATGGATTACCAGTCAAATATGAAACAGACAAGAGAATT
AACATTGACGGATGCAATGATGGGTACGTTGTTGCTCACTACCAAGAACCAAGACATCTG
CTATGCATGTGGGAGAAGCTCCTAACGACACAACAAGCAGAATGCTGCAGTACTAAGTAA

Peptide Sequence

PEP ID

OQU85197
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:4:54286977:54291710:1 gene:SORBI_3004G190800 transcript:OQU85197 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MWMTKKLAITVLLMLTSLLTARYLIEHSANSGISRYQILHLVHLDWFKSPADARETTTLE
VAVVTTADAPPASNSSDSRNSSPEVFQWLYTWNQMKQLANITNGLPHASEAISDGRTAWE
NLTASVQNASSQHREKERLCPYSIRRMDASKSENGIFTIDVPCGLIVGSSITLIGTPGVL
SGNFWIDLVGTALPGESEKPIALHYNVRLNGDKVTKDPVIVQNTFTANNGWGVEDRCPST
NYSNATEVEDLERCNAMVGTEEDINNSKHHTAAKHGEPSKYFPFKQGYLAIATLRVGSEG
IHMTVDGKHVTSFAYRAGLEPWYVTEVGISGDFKLVSAIVSGLPTSEDLENSNIEALKSP
PIPDDKDVDLLIGIFSTANNFKRRMAIRRTWMQYDAVRQGAVAVRFFVGLHTNLMVNEEL
WNEAQTYGDIQVLPFVDYYSLITWKTLAICIYGTSSLSAKYLMKTDDDAFVRVDEIQSTV
KQLNVSHGLLYGRINSDSSPHRNPESKWYISEEEWPEEKYPPWAHGPGYVVSQDIARAIN
NWYKASRLKMFKLEDVAMGIWVNDMKKDGLPVKYETDKRINIDGCNDGYVVAHYQEPRHL
LCMWEKLLTTQQAECCSTK

Transcript Sequence

Transcript ID

OQU85197
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:4:54286977:54291710:1 gene:SORBI_3004G190800 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

TGTCGCTCTTTCTTGTTTCTCACTGCCAGCTTGCCCGGCTGGCTGGCCCATTATTTGTTC
CCTTCGCGGCTCCTGTATTTCTCGCCCGTTACTCCTCGCCCAGCCACACGGCAGAGCCAT
ATGCCATACTCAGCTCCTCGTCTCCTCCCTCCCTTGTACTCGATCTCCTCTTCCTGCTCC
TTTCTCTATCTGTGTCCAGACCTGAAGATCGAACGAAGCCCGAGAAGACCGAGGTAAGCT
ACTCATTCTCTCTCCCATGGCAGTAGCAAGTTCATTTGTGTGCGTCTCTCTCTCTCTCTC
TCTCTCTCTCTCTTTCTCTGCGCAGCAAGTTCGCTCACCTCGATCAATCCATGCTCAGAG
CATTTCTAGCTTCTTTCTTCTTGATTTGGTGACAACCTTTACCAAGCTCTTCAATTATGT
TTTCTAGAGTGGATCAACTGATCAAGCTAAGCTCTGGTGACGACTTCTGGCAAGCTCCAA
AATTTATCCACTTCCATTTCCTTTTTATTTCACAAACCACTTTAATAGGATTTCTTTCCC
TACAAACTACTACTCCCGTCTCACTAAAAATGTCATTTTTTACTTTTAGACTTCTTGCTT
GACTGTTTGTCTTATTCAAATTTTTTATATAAATATTATTTATTTTGCTATGAATTATTT
TATTTTTAGAGATACTTTAATAATAATAATTTACTTATTTTATTATTTACATAAAAAATT
TGAATAAGAAGCAAATAAGAAGTCTACAGGTGAAAAAACGATACCGGAGGGAGTAGTCTT
GTTCTAAGAGCAACAGCACACAGACAAATAGCAGTACTTGGGATTAATCGCCTGCAAAAT
TCCCGGGGTAAAAGGTCAGAATTGCCGCCTACGCCTTTGAAGACTGCAAAGGCAATGGCA
GGACTAGACTGGCACGGGGGCGCCTGGTCCGGCACGGCGCTGCTGTTGCTACAAGCTGCC
GCCGCAAATAAGCATTGGACACATGCCAATGGTTTTGGTTTTTGACAAGGTCATGGTCAT
GCACACAGGGGAGGGCCGGCAACTTCCTTTCACTTTCAGCCAATATAACCGTAACTCTCC
CCAGACTATGTGCTCTGAATTTTCAGCTGAATGATGATAGAAAAATGATTCATTGATTTT
GACAATTTGTACTTTCTATTCGACTTTAGCCTGTTCGCTTGAGCTTATCTACCGAATCTA
CCAGTCATTCAGCAGTATTTTTCTATCACAATAAATCAGCGAACAATACTTTCAACAATG
ACTTTCTGCCAAATGAACATGCTTACATGTTCTCTGCGAAGTCATCGCCTCATAATATAT
TAGTAGAATTCTATTACAGCATGCAGACATGTATTCAAACTGGATAGGATATGCATATTT
GACTAACGTCTATTGCACTGGCAGGTGCGTCCGGCCAGGACTTTGACCAGGGGCGAAGAG
AAAAAGACCAGAGAGGGCTGCTAAATTTCCATCCAAGCCGGCGCCGGGTATGTGCTGACA
TTGTGACAACTGCGGCACCAGGGAAAAGGCGATCAAAACATGTGGATGACAAAGAAGCTT
GCCATCACGGTTCTGCTCATGCTTACTTCTCTGCTGACAGCACGGTATTTGATAGAGCAC
AGTGCGAATTCGGGGATATCTCGGTATCAAATCCTCCATCTGGTTCACCTGGACTGGTTC
AAGAGCCCAGCGGATGCACGAGAAACCACCACTCTGGAAGTAGCAGTAGTAACAACAGCA
GATGCTCCTCCAGCTTCAAACAGCTCGGATTCCAGAAACTCCTCCCCTGAAGTGTTTCAG
TGGCTATACACATGGAACCAGATGAAGCAGTTAGCCAACATCACCAACGGCCTTCCTCAT
GCGAGCGAGGCGATCAGCGATGGGAGAACTGCATGGGAAAACTTGACAGCATCAGTTCAG
AATGCAAGCTCTCAGCACAGAGAGAAAGAGAGACTCTGCCCGTACTCAATTCGCAGAATG
GATGCTTCCAAGTCGGAGAATGGCATCTTTACCATTGATGTACCCTGTGGGCTGATTGTA
GGTTCTTCAATAACTCTTATAGGAACTCCTGGAGTACTCTCTGGTAACTTCTGGATTGAT
CTTGTTGGGACGGCACTTCCAGGGGAATCTGAAAAGCCTATTGCACTGCATTACAATGTC
CGTCTGAATGGCGACAAGGTTACTAAAGATCCAGTGATAGTGCAGAATACCTTCACCGCA
AACAATGGCTGGGGGGTTGAGGATCGCTGTCCCAGCACTAACTATAGCAATGCAACTGAA
GTGGAAGATCTAGAGAGATGTAATGCCATGGTGGGCACAGAAGAGGACATAAATAACTCA
AAACATCATACAGCTGCCAAACATGGAGAGCCAAGCAAGTATTTTCCATTTAAACAGGGA
TACCTTGCTATTGCAACACTGCGTGTAGGATCGGAGGGTATCCATATGACAGTTGATGGG
AAACATGTCACTTCATTTGCATATAGGGCGGGTTTGGAACCATGGTATGTAACTGAAGTA
GGAATTTCTGGTGATTTCAAACTTGTAAGTGCGATTGTAAGCGGCTTGCCCACATCAGAA
GACTTGGAGAACTCTAATATTGAAGCGTTGAAGTCACCACCTATTCCAGACGACAAAGAT
GTAGACCTTCTGATTGGCATCTTTTCAACAGCAAACAACTTCAAGCGTAGGATGGCAATT
CGAAGGACATGGATGCAATATGACGCTGTGCGCCAAGGAGCAGTAGCAGTCCGATTTTTC
GTTGGCCTGCATACAAACCTAATGGTAAATGAGGAACTCTGGAATGAGGCACAAACGTAT
GGTGACATCCAGGTGTTGCCTTTTGTTGATTACTACAGCCTGATAACATGGAAGACACTA
GCAATATGCATTTATGGGACCAGTTCACTATCAGCCAAGTATCTGATGAAAACAGATGAT
GATGCTTTTGTCCGTGTAGATGAGATCCAATCCACAGTAAAACAGCTTAATGTCAGCCAT
GGGCTACTTTATGGTCGCATAAATTCTGATTCCAGTCCCCACAGAAATCCTGAAAGCAAA
TGGTACATAAGCGAAGAGGAATGGCCTGAAGAGAAATACCCACCATGGGCTCATGGACCA
GGATATGTAGTTTCACAAGACATTGCAAGGGCAATCAACAATTGGTATAAAGCAAGTCGC
TTAAAGATGTTCAAACTAGAGGATGTAGCAATGGGCATATGGGTAAATGATATGAAGAAA
GATGGATTACCAGTCAAATATGAAACAGACAAGAGAATTAACATTGACGGATGCAATGAT
GGGTACGTTGTTGCTCACTACCAAGAACCAAGACATCTGCTATGCATGTGGGAGAAGCTC
CTAACGACACAACAAGCAGAATGCTGCAGTACTAAGTAATGGATAAGGAACTTCAATGCT
TAGATGTTGGCCCGGTTTATGTATCAGGCCACTCGCTAACTTTGCGATAACAACAAAGAA
GCCTTTAACATCAATTTTTTTTTCTGGTGCGCAGCACTAATGTAATTAAACTCAATGAAT
TACACAGATAAAGTTAGTTCACCTCATCCCAGCTTATCTATATTT