Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

OQU85158
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:4:53604348:53609035:-1 gene:SORBI_3004G182300 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGCGCCACCTCCTGCCCTGCTCGCTCCCCGCCGACGACAAGGTCACCGCGCACTTCATG
ATCGCCGGCGGCGGCACGAGGAGGCTCCTCGCCGGAGGAGGCGCCTCCAGTGACTACTGC
CTCAAGGGCAAAGTTCCAATTCTTTCGGTAGAAGCTATTCATCAGTTACACATATTTATC
TTCGTCTTGGCAGTCACGCATGTGGTTCTCAGTGCTGTTACAGTTATTCTTGGAATCACA
CAGACAAGAAACTGGAAATATTGGGAGGACAAGATCCAGCAAAACAATGATAGTGCTCCT
CAAATGATCAAACATGTGCAAGAATTCCAATTTATCAAAAGTCACTTCAGAGGTCATGGA
AAAAGATGGGGAATATTCGGTTGGCTGCGCTCTTTTTTTAAACAATTCTATGGGTCAGTC
ACTGAGGAGGACTACACAACCCTACGACTTGGTTTTGTTATGAAACACTGCAGGGGGCAT
CCAAAATTCAACTTTTACAATTATATGAATAGAGCATTGGAAGTGGATTTCAAGAAAGTC
GTTGGCATAAGCTGGTACCTTTGGGCTATGCTAATGATATTCTTGCTACTCAATGTTCAT
GGATGGTACGTCTACATTTGGCTATCAGTAGCCCCATTCATTTTGCTACTTGTGCTCGGA
AGTAAGATGGAGCATATTATCACGGAGTTGGCTCTTGAGGTTGCCCAAAAACATACGGCA
ATAGAAGGGGTTCTAGTTGTAACTCCTTCGGATGAACTCTTTTGGTTCCATCGGCCTAAA
CTAGTTCTTCTCTTGATTCATATCATCTTGTTCCAAAATGCATTTGAAATTGCACTCTTC
TTCTGGTTGCTGGTCACGTATGGGTTTAATTCTTGCATTATGGGAGAACCAGCATATGCT
ATTATTCGTGTGGTGATAAGTGTCATCAGCCAACTCTTATGTGGATACAGCACCCTACCT
CTCTACGCTCTTATCTCCCAAATGGGAAGTTCTTTTAAGAAGGCCATTTTCGATGAAAAT
ATCTCCGAAGGCCTCACCAACTGGGCAGAAAATGCTAGGAGGCGTAATAGAATGGCAACA
ACAAGTGTCAGTGACAATTCACCTATTGGTGAGGGAATTCAAATGTCAAATAAGGCACAG
AGAGAATCAGCAATGGAACAAGGAACTGCAAGGTTGATCTAA

Peptide Sequence

PEP ID

OQU85158
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:4:53604348:53609035:-1 gene:SORBI_3004G182300 transcript:OQU85158 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MRHLLPCSLPADDKVTAHFMIAGGGTRRLLAGGGASSDYCLKGKVPILSVEAIHQLHIFI
FVLAVTHVVLSAVTVILGITQTRNWKYWEDKIQQNNDSAPQMIKHVQEFQFIKSHFRGHG
KRWGIFGWLRSFFKQFYGSVTEEDYTTLRLGFVMKHCRGHPKFNFYNYMNRALEVDFKKV
VGISWYLWAMLMIFLLLNVHGWYVYIWLSVAPFILLLVLGSKMEHIITELALEVAQKHTA
IEGVLVVTPSDELFWFHRPKLVLLLIHIILFQNAFEIALFFWLLVTYGFNSCIMGEPAYA
IIRVVISVISQLLCGYSTLPLYALISQMGSSFKKAIFDENISEGLTNWAENARRRNRMAT
TSVSDNSPIGEGIQMSNKAQRESAMEQGTARLI

Transcript Sequence

Transcript ID

OQU85158
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:4:53604348:53609035:-1 gene:SORBI_3004G182300 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

CTAATCGGTTGTTATTATTAGCAGCAATTTTAGCATTATCATTGCCCAATAAAATATAGG
AAGGTTGCCCAGTAAAATATAGGAAGGTCTCAAGCTATTTCATGTTGTTGTCTCTTTCTT
GGACTATTACATAGTATTAGTATATCTTCTCAGTCTTATGCTACTCCTATGCTATAAGAA
GAGGCAACCCATTCATTCATACTCATGCGCGCCACTTCTGTGCATGACGAATACCAGCTA
GTCGATCTGTGTTCCGTGTTTGACATTATTATTGCTGCCCAAGATTGGGCGGCGAAAGTA
ATTAATCAAGGGGACGGAATAAGCTTAAGCAGTTGCGATCGATCGGCGGCCATGGCCGGA
GGCGGCGACGATGCAGAGGAGATAACGCTGGAGCACACGCCCACGTGGATCGTCGCCTCC
GTATGTTCCATCATCGTCGTCATCTCCCTGCTCTTCGAGCGACTGCTCCACCTCCTCGGC
AAGGTACGACGTCCACCGCTCACATGCATATGCATCCATCGTCGTCCGAATCCACTGATG
ATGATCTGAATCAGCTTAATTTAATTTATGCATGCATTAAGCTACTAATACATAACTAGC
TAACCGCCGCCGTTTCAAATACATACACATGAACTCTGCTCCTTCTTGCATGAATAATGG
AACATATACAGAGGCTAACAAAAGGGCGCCGGAAGCCACTGTACGAAGCCCTCCTCAAGG
TCAAAGAAGGTTCGTGGTTTCCACACACATACCAGCATCATCATCTTCATCTTGCTCGAT
CATCATGCATGCCTGTCTGTGTTACTCGATCTGCTTTGCTCACCGGTCAATTCGTGCCTA
ATGGTGTCCATATACGAAACGAACGCAGAGCTGATGCTGCTGGGGTTCATCTCCCTGCTG
CTCACCGTGTTCCAGGGCACCACGCAGAAGATATGCGTCCAGGAGAGCGTGATGCGCCAC
CTCCTGCCCTGCTCGCTCCCCGCCGACGACAAGGTCACCGCGCACTTCATGATCGCCGGC
GGCGGCACGAGGAGGCTCCTCGCCGGAGGAGGCGCCTCCAGTGACTACTGCCTCAAGGGC
AAAGTTCCAATTCTTTCGGTAGAAGCTATTCATCAGTTACACATATTTATCTTCGTCTTG
GCAGTCACGCATGTGGTTCTCAGTGCTGTTACAGTTATTCTTGGAATCACACAGACAAGA
AACTGGAAATATTGGGAGGACAAGATCCAGCAAAACAATGATAGTGCTCCTCAAATGATC
AAACATGTGCAAGAATTCCAATTTATCAAAAGTCACTTCAGAGGTCATGGAAAAAGATGG
GGAATATTCGGTTGGCTGCGCTCTTTTTTTAAACAATTCTATGGGTCAGTCACTGAGGAG
GACTACACAACCCTACGACTTGGTTTTGTTATGAAACACTGCAGGGGGCATCCAAAATTC
AACTTTTACAATTATATGAATAGAGCATTGGAAGTGGATTTCAAGAAAGTCGTTGGCATA
AGCTGGTACCTTTGGGCTATGCTAATGATATTCTTGCTACTCAATGTTCATGGATGGTAC
GTCTACATTTGGCTATCAGTAGCCCCATTCATTTTGCTACTTGTGCTCGGAAGTAAGATG
GAGCATATTATCACGGAGTTGGCTCTTGAGGTTGCCCAAAAACATACGGCAATAGAAGGG
GTTCTAGTTGTAACTCCTTCGGATGAACTCTTTTGGTTCCATCGGCCTAAACTAGTTCTT
CTCTTGATTCATATCATCTTGTTCCAAAATGCATTTGAAATTGCACTCTTCTTCTGGTTG
CTGGTCACGTATGGGTTTAATTCTTGCATTATGGGAGAACCAGCATATGCTATTATTCGT
GTGGTGATAAGTGTCATCAGCCAACTCTTATGTGGATACAGCACCCTACCTCTCTACGCT
CTTATCTCCCAAATGGGAAGTTCTTTTAAGAAGGCCATTTTCGATGAAAATATCTCCGAA
GGCCTCACCAACTGGGCAGAAAATGCTAGGAGGCGTAATAGAATGGCAACAACAAGTGTC
AGTGACAATTCACCTATTGGTGAGGGAATTCAAATGTCAAATAAGGCACAGAGAGAATCA
GCAATGGAACAAGGAACTGCAAGGTTGATCTAATGTGGATGTACAAGCTAGTGCACAATG
TACATATACTAGGTAGGTAAGCGCACTTCGCCGCACCCATAGTGGCTGCTGGCTCCAATA
GACATCTCTGTATTATGAAGTGCTGCTCTACAACATGTCTGCCATGGGCACAACATTAAC
ATATGTATAACATAGTGAAGAGTTTAGACAACTGAATTGTGCATTAGTTAAATAAATGTG
TTAATAGTACCACATATATGTATAGGCTTTTCCAAGAGAAGAGAAAACAGTTTGTAAACA
TCATGGCAAGAGAGGTTCTTGCTTCGATTTCAAGTAGGAACATTTTGTTGTGATATAGTA
AAATTCTTGTGGATTGAATGAAAACACCTACAGGTGGCCCCTCGCCTCCAAATTAGTGTA
TCAAGAATCAAACCACATGTAATATATTTGTATCACCTCTGTGCTCTTGGATTCTCTT