Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

OQU85040
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:4:51111914:51121956:-1 gene:SORBI_3004G162200 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGGCCGGTACGAGCTCGTCAGGAGCGACGACGCGGCGGCGGGCGCCACGGGAACCGAT
CTCGAGTGCGGCGCCAGCGCCAGCAAGGCGTCGACGACGTCGCCCGCGGCACCGTCGACG
ACGTCGCCCGCGGCCCGGCAGCCGCGGCTCGTCTCCCTCGACGTCTTCCGCGGGATAACC
GTCCTGCTTATGATTATTGTTGACGATGCTGGAGGCTTCCTCCCGTCACTGAACCACTCT
CCTTGGGATGGCGTAACAATAGCTGATTTCGTCATGCCGTTCTTCCTTTTCATAGTTGGA
GTCTCGCTAACACTAGCGTACAAGCGGGTACCAGATAAACTGGAGGCAACTAAGAAGGCA
GTACTTCGTGCCCTCAAGTTGTTCTGCCTTGGTCTTGTTCTCCAAGGTGGATTTTTTCAT
GGTGTTCACAGTCTCACATTTGGCGTTGATCTAACGAAAATTCGGTTGATGGGCATACTT
CAGAGGATTGCAATAGCCTATCTTCTGGCTGCAATATGTGAAATCTGGCTCAAGGGAGAT
GATGATGTAGATTCTGGATATGGTTTGCTAAGGAGATACCGCTACCAATTATTTGTAGGA
TTGGTCCTCTCTATAGCCTATACTATACTTTTGTACGGTATATACGTTCCAGACTGGGAG
TACAAGATATCAGGCCCTGGTTCCACAGAGAAATCATTCTCTGTGAAATGTGGAGTAAGA
GGAGACACCGGACCAGCTTGCAATGCAGTTGGAATGGTTGACCGTACAATTCTAGGGATC
GATCACCTCTACAGACGGCCAGTCTATGCGCGCACAAAGGAATGTAGTATAAATTATCCA
GAGAATGGACCTCTTCCACCCGATGCTCCATCATGGTGCCAGGCACCATTTGATCCTGAA
GGCCTCCTCAGCTCCGTTATGGCAATTGTCACTTGCTTGATTGGACTTCAGTTTGGGCAT
ATAATTATACATTTTGAGAAACACAGGGGAAGAATCACCAATTGGTTGATCCCTTCCTTC
AGCATGTTAGCTCTAGCCTTCTTAATGGACTTCAGCGGAATGCGCATGAATAAACCATTA
TACACAATAAGCTACACTTTGGCTACTGCTGGCGCTGCGGGTCTTCTTTTTGCTGGAATT
TATGCTCTTGTGGATCTGTACGGGTTCAGAAAACCTACCATTCCCATGGAGTGGATGGGG
AAGCACGCCCTGATGATATATGTCCTGGTGGCATGCAACATCCTGCCCATGTTCATCCGT
GGCTTCTACTGGAGGGACCCCAACAACAGCCTTCTGAAAGTCATTGGTATCGGCGCGTGA

Peptide Sequence

PEP ID

OQU85040
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:4:51111914:51121956:-1 gene:SORBI_3004G162200 transcript:OQU85040 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MGRYELVRSDDAAAGATGTDLECGASASKASTTSPAAPSTTSPAARQPRLVSLDVFRGIT
VLLMIIVDDAGGFLPSLNHSPWDGVTIADFVMPFFLFIVGVSLTLAYKRVPDKLEATKKA
VLRALKLFCLGLVLQGGFFHGVHSLTFGVDLTKIRLMGILQRIAIAYLLAAICEIWLKGD
DDVDSGYGLLRRYRYQLFVGLVLSIAYTILLYGIYVPDWEYKISGPGSTEKSFSVKCGVR
GDTGPACNAVGMVDRTILGIDHLYRRPVYARTKECSINYPENGPLPPDAPSWCQAPFDPE
GLLSSVMAIVTCLIGLQFGHIIIHFEKHRGRITNWLIPSFSMLALAFLMDFSGMRMNKPL
YTISYTLATAGAAGLLFAGIYALVDLYGFRKPTIPMEWMGKHALMIYVLVACNILPMFIR
GFYWRDPNNSLLKVIGIGA

Transcript Sequence

Transcript ID

OQU85040
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:4:51111914:51121956:-1 gene:SORBI_3004G162200 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

GCACTAGTCCTGTCCTATATAAACACTGCTAGTAGTAGTCCTACTAGACGCGAGTGGGCG
ATCCACCACAAAGGAACCGAGAAGAGCACCCGCTCGATCCGGGAGTGGCAGGTCGGCGAG
GAGACGAAAGGCGGTCGGCGACAACAGACGCAGCTGCGGCGGAGAGTTTTGCAGGCGCGG
GAGATCACGCAAGTCTGTTGCGCTTGAAACGGAGGGGGGAAAAAAACAAGCAGCGGGGAG
TCCCGTTCGTTGCCGGTACCACAACACGCAACTGCTGCCCCAGGTAAGGCGGAGGCGGAT
ATCCATCTACTTACCAGTTTCCTCTCTCTCTCGATCGATCGGTTTGCTTGTTCGCCGGGG
TCTCTCCCTCCCGCATCTACTGAGGTCTGTTTGTGCGCGTCTTGTGACGGCGGCGATGGC
GGCGGATGGGAATGCAGCAGCAGCAGCAGGAGGAGGAGGCGCCGGAGTCGCGCCGTCGCC
GCCGTGCTGCAGGCAGAGGAGGACGGCGCCGGCCATCATGGGCCGGTACGAGCTCGTCAG
GAGCGACGACGCGGCGGCGGGCGCCACGGGAACCGATCTCGAGTGCGGCGCCAGCGCCAG
CAAGGCGTCGACGACGTCGCCCGCGGCACCGTCGACGACGTCGCCCGCGGCCCGGCAGCC
GCGGCTCGTCTCCCTCGACGTCTTCCGCGGGATAACCGTCCTGCTTATGATTATTGTTGA
CGATGCTGGAGGCTTCCTCCCGTCACTGAACCACTCTCCTTGGGATGGCGTAACAATAGC
TGATTTCGTCATGCCGTTCTTCCTTTTCATAGTTGGAGTCTCGCTAACACTAGCGTACAA
GCGGGTACCAGATAAACTGGAGGCAACTAAGAAGGCAGTACTTCGTGCCCTCAAGTTGTT
CTGCCTTGGTCTTGTTCTCCAAGGTGGATTTTTTCATGGTGTTCACAGTCTCACATTTGG
CGTTGATCTAACGAAAATTCGGTTGATGGGCATACTTCAGAGGATTGCAATAGCCTATCT
TCTGGCTGCAATATGTGAAATCTGGCTCAAGGGAGATGATGATGTAGATTCTGGATATGG
TTTGCTAAGGAGATACCGCTACCAATTATTTGTAGGATTGGTCCTCTCTATAGCCTATAC
TATACTTTTGTACGGTATATACGTTCCAGACTGGGAGTACAAGATATCAGGCCCTGGTTC
CACAGAGAAATCATTCTCTGTGAAATGTGGAGTAAGAGGAGACACCGGACCAGCTTGCAA
TGCAGTTGGAATGGTTGACCGTACAATTCTAGGGATCGATCACCTCTACAGACGGCCAGT
CTATGCGCGCACAAAGGAATGTAGTATAAATTATCCAGAGAATGGACCTCTTCCACCCGA
TGCTCCATCATGGTGCCAGGCACCATTTGATCCTGAAGGCCTCCTCAGCTCCGTTATGGC
AATTGTCACTTGCTTGATTGGACTTCAGTTTGGGCATATAATTATACATTTTGAGAAACA
CAGGGGAAGAATCACCAATTGGTTGATCCCTTCCTTCAGCATGTTAGCTCTAGCCTTCTT
AATGGACTTCAGCGGAATGCGCATGAATAAACCATTATACACAATAAGCTACACTTTGGC
TACTGCTGGCGCTGCGGGTCTTCTTTTTGCTGGAATTTATGCTCTTGTGGATCTGTACGG
GTTCAGAAAACCTACCATTCCCATGGAGTGGATGGGGAAGCACGCCCTGATGATATATGT
CCTGGTGGCATGCAACATCCTGCCCATGTTCATCCGTGGCTTCTACTGGAGGGACCCCAA
CAACAGCCTTCTGAAAGTCATTGGTATCGGCGCGTGAAGCCATGATCTTCTACATGTTCA
GGCCTAAACTTGGACACGGATTTTTCTTCTTAATATAAGGATGCACAGCTCTCTCGCGTG
TTCGAGAAAATTAGACTTAGATACGGACGGGATGCAGAAGTAGGTCCTCAGGCCAAGTTT
TGCTATGCGGTTAGAGCACGATAGTGCTCAGCTCATCGCCATGGGGCTGCCTATTCTATC
AGCACTCCCGGGCTGGCTGTTGCCAAGGAGAGTCCATTCTCCCTGATCACTTTGTATATG
GTGGAGTTGAGCATGTATATGACATCATACGAGTAATACGATGGGATTCAGATGAAATAT
AGTACATATCCAAACAAGTTCTC