Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

OQU85015
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:4:49985568:49992882:-1 gene:SORBI_3004G157700 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGAAGTCGCCGTTGCGGAGGCTCAGGGGCTTCGGCCACCACCACCCCAAGGAGCGGAGG
GGCCACGAGCCGCCGCCGGCCAAGCTCGACGAGCTCGTCTGCGCCGCCCATGAGGTGGAA
GACATGAGAAACTGCTATGATGGCTTGATTTCAGCTGCAGCCGCTACAACAAATAGTGTA
TATGAGTTTTCTGAGGCTCTTGAGGAACTGGGTGGTTGCTTTCTCGCAAAAACTGCACTC
AATGGTGATGATGATGATAGTGGTAGAGTGCTGATGATGCTGGGAAAGGTCCAATTTGAA
TTACTAAAGTTTGTTGATACTTATGAAATGAAGCAGCAATGCGACATGAAAAGAGAAGCA
TATGAAGCTATGAGGGCATCCTATACAGAAAAGGGAAGGTCAAGGCATTCCAAAGCTGAA
ACATACTCTGCAGAACAACTGCAAAGTGCTCTCGCTGAGTACCAAGAAGATGCAGCACTG
TTCATATTTCGCTTAAAATCATTGAGGCAAGGGCAATTCCATAGCCTTTTAACGCAGGCT
TCTCGACATCATGCTGCTCAGTTAAGCTTTTTCAGGAGAGGGTTGAAGTGTCTTGAGGCA
CTCGAACCTCATGTAAAAGCAATAGCTGAGAAGCAGCACATTGACTACCAGTTTAGTGGT
CTTGAGGATGATGCATCTGACAACGATGATTACAGCTCTGACCAGGATGATTGCAGTGAT
GATGGAGAGCTTAGTTTCGACTATGAAATAAATGACAAGGATCAAGATTTTCTTGCTTCA
AGAGGTTCAATGGATTTAGATAAAAGAGATGTGACGAATTCCCCGCAGCCAGTAAAAGAA
AGCATGCAGGAAGAGGTCAAACAAACCAAGCGAAATGTTATGACTCCACGAGTGAAGCCA
GAGTTTAATACACACTCAGCACCTATTCTGGCAGGCAATTTACCGGATCCAGCTGAGATA
TTTTGGCAAATGAAGCCATCTTCAGCCAAACATTCGTACAAACTTCCAATGCCAGTTGAT
GACAAGGATCCCAGATCAGTAGGTGCTCACCGTTCACATCATTCACAGCAGTTGGAAAGT
AAACCTCGTGTCTCGGCGAATCCGTGGCATTCATCTCCACTGATGAAAGATTTTAGGCCA
GGTGGCCATTTGAAAATGCCATCAAGTACGGAGAGGATATCAACGTTCTCCCAGTCGGTT
TCTGATTACAAGAAGATGAAGAGGGAATCTTGGTCTGGTCCAATACCAAGCAGACCAGGG
TTAAGCAAGCCATCTTCTCTGAACGATCATAGATCACCCATGGCACAACATCTTGTGATG
CCAGGAAATTTGCAATGCCACTCCCAGCAGCTGTCATCTTTGTCCCCAAAAGTTTCCCCC
AACATGTTGCCACATCCAACAAAATCACCAAAGATCAGTGAGCTGCATGAGCTGCCTAGG
CCTCCAGCCAATGTGGAGTCCCTCAGGCCTTCTGGTTTGGTCGGTTACTCTGGTCCTCTG
GTATCGAAGCGTCAGACTCAAATCCCTGCAGCAACAGCCCGTGTGTCGCCGATGGCATCA
CAAACCCCCTCACCACTTCCGCTACCACCTGCTACCCTCACTCGCAGCTACTCCATACCC
TCAAATAGCCAGAGGATACCAATCATCACTGTGGACAGATTGTTGGAGGCTAGAAATAGC
AGGGACGGCAGTGATATTTCTTCCCCGCCGCTTACTCCGCTGTCACTGACTGATCTGTCC
CAGCAGCAAGGAACAAAAACAACTACAAGTCGCACAAGGATGAATGGAGCCTTATGA

Peptide Sequence

PEP ID

OQU85015
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:4:49985568:49992882:-1 gene:SORBI_3004G157700 transcript:OQU85015 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MKSPLRRLRGFGHHHPKERRGHEPPPAKLDELVCAAHEVEDMRNCYDGLISAAAATTNSV
YEFSEALEELGGCFLAKTALNGDDDDSGRVLMMLGKVQFELLKFVDTYEMKQQCDMKREA
YEAMRASYTEKGRSRHSKAETYSAEQLQSALAEYQEDAALFIFRLKSLRQGQFHSLLTQA
SRHHAAQLSFFRRGLKCLEALEPHVKAIAEKQHIDYQFSGLEDDASDNDDYSSDQDDCSD
DGELSFDYEINDKDQDFLASRGSMDLDKRDVTNSPQPVKESMQEEVKQTKRNVMTPRVKP
EFNTHSAPILAGNLPDPAEIFWQMKPSSAKHSYKLPMPVDDKDPRSVGAHRSHHSQQLES
KPRVSANPWHSSPLMKDFRPGGHLKMPSSTERISTFSQSVSDYKKMKRESWSGPIPSRPG
LSKPSSLNDHRSPMAQHLVMPGNLQCHSQQLSSLSPKVSPNMLPHPTKSPKISELHELPR
PPANVESLRPSGLVGYSGPLVSKRQTQIPAATARVSPMASQTPSPLPLPPATLTRSYSIP
SNSQRIPIITVDRLLEARNSRDGSDISSPPLTPLSLTDLSQQQGTKTTTSRTRMNGAL

Transcript Sequence

Transcript ID

OQU85015
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:4:49985568:49992882:-1 gene:SORBI_3004G157700 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

TTGTCGAAACTTGCCAAATCAGAGCAGCAGCCGCTTTTGCTCTCGTCTCCCTCGTCTCTC
CCGCGCGATTCCACTCTCATGGTCAACCGTGCGCAGGCATACATATGGGGGGACTGGGGA
GGAGGGGTCTCCATGTTCCTCCTCCATTCGCGATTATATATTAAACAAAAAATTAAGCAG
CAGCAGCAGCGGCGGCGGCGGCGGCGGCTATTAATCCTTCCAAGCTCCCTCCCTCGTAGC
CCCAAGTGGCCAGCTAATTTTAGCCCACCGTCCGTAGTCGAGGCTCTCCAAGGCAACGGA
CACACAGAGGACCAGGAAGGAGAAGAAGGGGGCCGGCAGGCTGCAGCAACAAGAAGGGCG
CTTTCCAAAATCCAAATCCACGGCTAGCTTTTACGCTTACGCAAAGATCAGAGGCCAGAG
GGGGATTGATTGATCGGGGCAAGGGAGCGTCTGTTGCAAGGACGCACGCAGGAGATTGAT
TAGAGGGAGAAGAAACCACACAAGAGAGAGTGCTCAATCATATCGCCGGAGGGAGGAGAT
GAAGTCGCCGTTGCGGAGGCTCAGGGGCTTCGGCCACCACCACCCCAAGGAGCGGAGGGG
CCACGAGCCGCCGCCGGCCAAGCTCGACGAGCTCGTCTGCGCCGCCCATGAGGTGGAAGA
CATGAGAAACTGCTATGATGGCTTGATTTCAGCTGCAGCCGCTACAACAAATAGTGTATA
TGAGTTTTCTGAGGCTCTTGAGGAACTGGGTGGTTGCTTTCTCGCAAAAACTGCACTCAA
TGGTGATGATGATGATAGTGGTAGAGTGCTGATGATGCTGGGAAAGGTCCAATTTGAATT
ACTAAAGTTTGTTGATACTTATGAAATGAAGCAGCAATGCGACATGAAAAGAGAAGCATA
TGAAGCTATGAGGGCATCCTATACAGAAAAGGGAAGGTCAAGGCATTCCAAAGCTGAAAC
ATACTCTGCAGAACAACTGCAAAGTGCTCTCGCTGAGTACCAAGAAGATGCAGCACTGTT
CATATTTCGCTTAAAATCATTGAGGCAAGGGCAATTCCATAGCCTTTTAACGCAGGCTTC
TCGACATCATGCTGCTCAGTTAAGCTTTTTCAGGAGAGGGTTGAAGTGTCTTGAGGCACT
CGAACCTCATGTAAAAGCAATAGCTGAGAAGCAGCACATTGACTACCAGTTTAGTGGTCT
TGAGGATGATGCATCTGACAACGATGATTACAGCTCTGACCAGGATGATTGCAGTGATGA
TGGAGAGCTTAGTTTCGACTATGAAATAAATGACAAGGATCAAGATTTTCTTGCTTCAAG
AGGTTCAATGGATTTAGATAAAAGAGATGTGACGAATTCCCCGCAGCCAGTAAAAGAAAG
CATGCAGGAAGAGGTCAAACAAACCAAGCGAAATGTTATGACTCCACGAGTGAAGCCAGA
GTTTAATACACACTCAGCACCTATTCTGGCAGGCAATTTACCGGATCCAGCTGAGATATT
TTGGCAAATGAAGCCATCTTCAGCCAAACATTCGTACAAACTTCCAATGCCAGTTGATGA
CAAGGATCCCAGATCAGTAGGTGCTCACCGTTCACATCATTCACAGCAGTTGGAAAGTAA
ACCTCGTGTCTCGGCGAATCCGTGGCATTCATCTCCACTGATGAAAGATTTTAGGCCAGG
TGGCCATTTGAAAATGCCATCAAGTACGGAGAGGATATCAACGTTCTCCCAGTCGGTTTC
TGATTACAAGAAGATGAAGAGGGAATCTTGGTCTGGTCCAATACCAAGCAGACCAGGGTT
AAGCAAGCCATCTTCTCTGAACGATCATAGATCACCCATGGCACAACATCTTGTGATGCC
AGGAAATTTGCAATGCCACTCCCAGCAGCTGTCATCTTTGTCCCCAAAAGTTTCCCCCAA
CATGTTGCCACATCCAACAAAATCACCAAAGATCAGTGAGCTGCATGAGCTGCCTAGGCC
TCCAGCCAATGTGGAGTCCCTCAGGCCTTCTGGTTTGGTCGGTTACTCTGGTCCTCTGGT
ATCGAAGCGTCAGACTCAAATCCCTGCAGCAACAGCCCGTGTGTCGCCGATGGCATCACA
AACCCCCTCACCACTTCCGCTACCACCTGCTACCCTCACTCGCAGCTACTCCATACCCTC
AAATAGCCAGAGGATACCAATCATCACTGTGGACAGATTGTTGGAGGCTAGAAATAGCAG
GGACGGCAGTGATATTTCTTCCCCGCCGCTTACTCCGCTGTCACTGACTGATCTGTCCCA
GCAGCAAGGAACAAAAACAACTACAAGTCGCACAAGGATGAATGGAGCCTTATGACACAC
ACCAACCAAATCCATACTGATCTTAGTTGATTTTGTAAGTAGTGATGTATTGTAGGTTCA
TATTCATTATATTCTTTCATTCATTGTCTGTGTTGCAAAGGAAAAGGACGGAAAAAGTAA
TATATACTGGTTACATAATGCAAGAACATCGAACCTCCGGTTCAGTTTTCTGTGCTAGTG
TCAGATGAAAGGGGCTGTTTCCTCAGTTCCGTTTTGTTTCGTTTTTGGATGAATTTTCCA
TTTCTTGACACTACATGATTTGGGTCCAGAATCCAGATCGTATGGGTGAAGAGAAATGAA
AGTATGAAACCCTGTACAGAAGCATGATGCATGCTGGTAATGTAATGTTATCCTTACCAT
TCTGTCTCGACAAAAATATGACGCTCCTTCCCTCTTGAATGAT