Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

OQU84936
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:4:44731035:44735901:1 gene:SORBI_3004G145200 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGTCAGAATTGCTTAATCAGAAATCTTCAGTCCAAGGGAAAGTTCCGTCAGGCTATTTT
AACGCTCTCTTTGAATTAAGTGGAGCTTGGTTGACTGATGCCAAAGAGACCAAGCATCTA
GCATTCGATGGATATTTCATTTCTTTGTACAACTTGCACCTAAAGGCTTCTCCATTAGTT
CTTCGAGATGAAGTAAAAAAGGCTGTTCCATCCAAGTGGGATCCTGTTGCATTATCATGG
TTTATCAAGACTTATGGGACACATATAATTGTTGAAATGGGAATCGGAGGTCAGGATGTC
ATATGTGTTAAACAAAGTCATTCTTCAACCGTTTCAACTGCTGATCTTAAGTTGCACATG
GAAGACCTTGGTGATTTCTTATTTTCTGATGGGAAGAACCACTCCCCAATACATCGCAAG
ACAAAGGATGGCAAGAGCAAGGTGCCTGATGTTTTTGTCAGGATAGTGCAGCACTCTAAT
AACCTGCACCTTTCTACCTATTCTGAAACATCAACCAAGGATGGCCTGACAGTTACATGT
TCGAAGAGGGGAGGAGAAGCATACCTACCCAACCACTCCAAGTGGCTGCAAACAGTGGCA
AAGAAACCTGATGCCATTATGTTCAAATTTGTCCCCATCACCTCTCTTCTAACTGGTATT
CCTGGTAGTGGTTACCTCAGCCATGCCATCAATCTATATCTTCGCTATAAACCTGATCTT
CAAGACTTGCAATATTTCTTGGAGTTTCAAGTTCCTCTACAATGGGCACCTATGTTCAAC
GAGCTTGTCCTTGGGCCCCAAAAGAGAAAAGGCTCCTACCCTTCAATGCAGTTCAGATGT
CTCGGCCCCAAACTCCATGTCAGCACTTCTCAGGTATCTAGTTCTCAGAAACCGGTGGTT
GGCCTACGGCTATACCTGGAGGGCAGGAAGTGCAACCGGTTGGCCATCCATGTCCAGCAC
CTCTCCAGTGTTCCAAGCATGATTGGAGACTCCGTGGCATCTTCAATGTCAGAATGGCGC
GAGTCCGAAGACAGCGACCCAGGGTACATCGAGGCCATCCAGTGGAAGAACTACTCGTGC
GTCTGCACCTCCGCTGTCAAGTACAACCCGGAGTGGCACAAGAGAGCCCCCGGCGGAGTC
TTCGTCGTCACTGGTGCCCAGCTCGTCACCAAGGGGACCTGGTCCAAGAAGGTCCTCCAT
CTGCGCCTCCTCTACACCCACATCCCCAACTGCACCATCCAGAGGACCGAGTGGACGAAC
GCTCCGGCGTCGTCTCAGAAGGGGAGCTTCCTGACGACGATCAGCACGACACTGAGCTCC
CCTTTCACGCAGCGTGACACCCATCAGCAGGCGAAGCATGAGCCGGTGCAGCTGAACTCA
GGTGTCTACCCGGATGGACCGCCCGTCCCGCTCCGGTCCAGGAAGCTCCTCAAGTTCGTC
GACATTTCGGAGGTGGTAAAAGGGCCACACGACGTCCCGGGCCACTGGCTGGTGATCGCG
GCGAAGCTTGTGAAGGAGGGAGGGAAGATCGGGATCCATGTGAAGTTTGCACTGCTAGGC
TACGAAGGGCAATCGCAGGGTGACAGTTTCATGAGCTGA

Peptide Sequence

PEP ID

OQU84936
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:4:44731035:44735901:1 gene:SORBI_3004G145200 transcript:OQU84936 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MSELLNQKSSVQGKVPSGYFNALFELSGAWLTDAKETKHLAFDGYFISLYNLHLKASPLV
LRDEVKKAVPSKWDPVALSWFIKTYGTHIIVEMGIGGQDVICVKQSHSSTVSTADLKLHM
EDLGDFLFSDGKNHSPIHRKTKDGKSKVPDVFVRIVQHSNNLHLSTYSETSTKDGLTVTC
SKRGGEAYLPNHSKWLQTVAKKPDAIMFKFVPITSLLTGIPGSGYLSHAINLYLRYKPDL
QDLQYFLEFQVPLQWAPMFNELVLGPQKRKGSYPSMQFRCLGPKLHVSTSQVSSSQKPVV
GLRLYLEGRKCNRLAIHVQHLSSVPSMIGDSVASSMSEWRESEDSDPGYIEAIQWKNYSC
VCTSAVKYNPEWHKRAPGGVFVVTGAQLVTKGTWSKKVLHLRLLYTHIPNCTIQRTEWTN
APASSQKGSFLTTISTTLSSPFTQRDTHQQAKHEPVQLNSGVYPDGPPVPLRSRKLLKFV
DISEVVKGPHDVPGHWLVIAAKLVKEGGKIGIHVKFALLGYEGQSQGDSFMS

Transcript Sequence

Transcript ID

OQU84936
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:4:44731035:44735901:1 gene:SORBI_3004G145200 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

CCTCCTCCTCCTCCTCCTTCCTCCTTCCTGCTTCCACTTCCACCAGTTCCAACTTCCAGC
GCGCCGCGTGATCGGAGACGGATCAGGCTGCCCTGTTTTATCCCGCGGGTTGCTGCTGTG
ACGCCGTGATTGGTCGGGGGTTTGAGGGATCAGACGGCGGGGTTGGATCCATCATGCCTT
TGTTTGTTGTCTTGTTGCTAGTTTCTCTTGCGTCCGCAGCATCGCGACCTGAATCAACAG
CTTATGCTTGATTGGACATAGCGTGTCGAATTCACAGTACTAATGGCTGATTTGTTACTG
AATGGATGACAGATTGGGCTGATAAACTCGTAGCTTGGCTTTGCCAGATTTTTGAGAACG
GGACCGCATTTCTTGTGGCTTCAAATATTACCCATTTGATTTGGGCGTCAAAAATTCTCT
TTGCCTTTCAACTCTTCCATCTTTTCTCCTTTTATTTTTTAAATTAAAAAAATAAGCATT
TTCCTGCCTGATGACGCGGTATGGCAATTATGTTTCTCGTTCGCAAAAAATATGTCAGTC
AACCTCCAAGTCCTGTGCTTAAAGATCAATCATCATCATCATCAACAACAGTTGAGGAAG
CGACACCTTCCTTTCTTTTGCGTGGGGGCACAAATTCGGTGCTAGTACTGTACGTCGTAG
ATGCAAACCAACTGCACGCGCGCCACCAACCGCGTAACTTTCCTGGGCTGCGGAGCATCA
GGATCGAGCTGCCACGGCCTTCCATTCATTAACGCCGGGAATGTCTGGCGTCCTGGATAT
GATCCTGCTCATCCTTTTTGTTGCGTGCTTGATTGATGCCTACGGCCTACCGGAGTTTAA
TTTGGTGGCCACCTGTATGGGCTGGGGATATTGCCTGCCTTCATCATGGCTCCTCGATCT
GGCAGGCACCAATTAAGTTTCGTGCAAATCCTTCAACGATTCGGTTCGGTGTGCGTTACA
TCATGCTGATGTGCGATTAGGACTCTCGTGACATTCAGACTAGTAGTAGCTTCCGGTGGA
TTTCAGCCTTTCAGGACTGGTAGTGGTACAACTGTGTGTCGTTGGTTTCCAGTCATTCTT
GTAGGTAATACCTTTACCCGCCGGCGATGGGCCAGTGAAATTTTGTGGACGGAAGTAAGC
AAATGTTAACCACTCCAGGGAGAAATCGTTAACTTTTCTTGACTCAGCAACTGATTTTTT
AGAAATCGTTAACGTTTCTTTGACTCATGGCAAACATAGCAAATGATGTGTAACCCCGTG
GCAGAGGAAAAAGCTAGTCCCTGTCATGAAAGCTGGTATACTGCGAGTTTATGACAAAAC
ATTGTGGGACTTTTGGAGGTGGGTTTGGACAAAACTAATTATTTCCGGTGCACGACTGCA
GCATGTCATTGGACCATGTGTCCTGTTAAATGTGTAGAACCTTCTTGCTTTTCATGGTGA
AAAGCAGCTTTACTTGACGGCTTTGGTTTAAGTACAATTCACATGGTAGGCTTGTGTCGT
TCGCTTATGAGTCAAGACCACGACTAGGTTACCATCTCTCTGCTTTGCACTTTATCATTG
GATATTGCCCTGTTTCTGATAATTCTAACTCCAGAGTATGATTGTGTTTGCCTTTTTATG
CTACCTCGGTGTTTCTTTTTCTGTTTTCCCTTCTAAAACTAGTTTAGTATTTTAGGTTGT
AACATTGAAAATATGCTCCTTTCAATTTTTGGAGGTGGTATTCCCTGTTTATATCATGGT
TAAAAGCCACTGTTTCTTTATTTCTTCACTCGAAATTTACTTTATAGTAATATGCCAGTA
GAATTGATCAATCAAAGTTACTAAAATGGTTAATCGGCGACTAAAGAAAGTTTGACTATG
AAGTCCAATGACTACAGTTGTTGAACTCTATCTGCAAGTGTTTACAGATTATTCTGACCA
CATTTTTAATTTCTTGATCAGATGTCAGAATTGCTTAATCAGAAATCTTCAGTCCAAGGG
AAAGTTCCGTCAGGCTATTTTAACGCTCTCTTTGAATTAAGTGGAGCTTGGTTGACTGAT
GCCAAAGAGACCAAGCATCTAGCATTCGATGGATATTTCATTTCTTTGTACAACTTGCAC
CTAAAGGCTTCTCCATTAGTTCTTCGAGATGAAGTAAAAAAGGCTGTTCCATCCAAGTGG
GATCCTGTTGCATTATCATGGTTTATCAAGACTTATGGGACACATATAATTGTTGAAATG
GGAATCGGAGGTCAGGATGTCATATGTGTTAAACAAAGTCATTCTTCAACCGTTTCAACT
GCTGATCTTAAGTTGCACATGGAAGACCTTGGTGATTTCTTATTTTCTGATGGGAAGAAC
CACTCCCCAATACATCGCAAGACAAAGGATGGCAAGAGCAAGGTGCCTGATGTTTTTGTC
AGGATAGTGCAGCACTCTAATAACCTGCACCTTTCTACCTATTCTGAAACATCAACCAAG
GATGGCCTGACAGTTACATGTTCGAAGAGGGGAGGAGAAGCATACCTACCCAACCACTCC
AAGTGGCTGCAAACAGTGGCAAAGAAACCTGATGCCATTATGTTCAAATTTGTCCCCATC
ACCTCTCTTCTAACTGGTATTCCTGGTAGTGGTTACCTCAGCCATGCCATCAATCTATAT
CTTCGCTATAAACCTGATCTTCAAGACTTGCAATATTTCTTGGAGTTTCAAGTTCCTCTA
CAATGGGCACCTATGTTCAACGAGCTTGTCCTTGGGCCCCAAAAGAGAAAAGGCTCCTAC
CCTTCAATGCAGTTCAGATGTCTCGGCCCCAAACTCCATGTCAGCACTTCTCAGGTATCT
AGTTCTCAGAAACCGGTGGTTGGCCTACGGCTATACCTGGAGGGCAGGAAGTGCAACCGG
TTGGCCATCCATGTCCAGCACCTCTCCAGTGTTCCAAGCATGATTGGAGACTCCGTGGCA
TCTTCAATGTCAGAATGGCGCGAGTCCGAAGACAGCGACCCAGGGTACATCGAGGCCATC
CAGTGGAAGAACTACTCGTGCGTCTGCACCTCCGCTGTCAAGTACAACCCGGAGTGGCAC
AAGAGAGCCCCCGGCGGAGTCTTCGTCGTCACTGGTGCCCAGCTCGTCACCAAGGGGACC
TGGTCCAAGAAGGTCCTCCATCTGCGCCTCCTCTACACCCACATCCCCAACTGCACCATC
CAGAGGACCGAGTGGACGAACGCTCCGGCGTCGTCTCAGAAGGGGAGCTTCCTGACGACG
ATCAGCACGACACTGAGCTCCCCTTTCACGCAGCGTGACACCCATCAGCAGGCGAAGCAT
GAGCCGGTGCAGCTGAACTCAGGTGTCTACCCGGATGGACCGCCCGTCCCGCTCCGGTCC
AGGAAGCTCCTCAAGTTCGTCGACATTTCGGAGGTGGTAAAAGGGCCACACGACGTCCCG
GGCCACTGGCTGGTGATCGCGGCGAAGCTTGTGAAGGAGGGAGGGAAGATCGGGATCCAT
GTGAAGTTTGCACTGCTAGGCTACGAAGGGCAATCGCAGGGTGACAGTTTCATGAGCTGA
GTCTCTGTACATAACAACAGCTGGCTCATCTTTGTAGATTTCAGGATTTTGGAAGAAGCA
TAGGACGAGGATTTGTTATTGCTTTTTTTTTTTGGGGAGGTCGACAGGAAGTGTATAGAG
GGCAGTCACAATAAACCAATCATCGCTCTGTTGAGGATGCTCCGTGAATTCCCGTGCAGT
ATAATTAGAGCCCGTAGTTGTAAATTACTCCTTTTTTACAAGGTATATATTTATTTCAGT
ATAGCAAAGACTTCGGTT