Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

OQU84856
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:4:21449775:21461203:-1 gene:SORBI_3004G133700 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGCCGCCGCCGCCGCCGCCGCCGACGCCGACGCAGCAGAGGTGGAGCGGCTTTACGAG
CTCGGCGAGCGCCTCTCCTCCGCCAAGGACAAGTCCGAGCATGCGGCGGACTACGAGGCG
ATTATTGCAGCGGTGAAGGGACAGAGTGTCAAGGCGAAGCAGCTCGCAGCGCAGCTCATC
CCCAGGTTCTTCCGGAGCTTCCCTGCACTCGCCACGCGTGCCATGTCGGCCATGTTCGAC
CTCGTCGATATGGAGGAGCTCGCGATCAGAATACAAGCTATTCGGGGGTTTCCACTTCTT
GGCAAAGATACTGAATTTGTGTCAAAAATTGCAGATGTTTTGGGACAACTCCTTACAAGT
GAGGAAAATGTAGAGCGTGATGCTGTTCATAAAGCGCTCATGTCCCTTATACGACAAGAT
GTTAAAAATTCTTTACAACCTTTATTTAAGCATGTGGAGCAAGGATCAGAGATTCGTGAG
AAGATTATTTCTTTTCTTCGAGACAAGGTCTTTCCTCTTAAAGCAGAGCTACTGAAACCT
CAAGCAGAAATGGAGAGATTTATAACAGATTTGATAAAGAAAAGTGTGCAAGATGTAACT
GGTTCAGAATTTGAACTATTCATGGGATTCCTGCGAAGCTTGAGCATATTTGGGGATACT
GCTCCTAGAGAGTCCTTTCAAGAACTAATTGAAATTATTCAAGCACAGGCTGATCTGAAT
TCACAATTCAATGTTTCTGACATTGACCACATTGAGAGGTGGATTTCATGCATGTATATG
GCTCTTCCAATCTTCATGAGAGGAGGATCAGCAAGCAAGTTCCTCAATTACTTCGTCAAG
CAAATTGTTCCAGCATTTGAGAAGATTCCTGAAGAAAAGAAACTGGATTTGCTCAAGACT
ATTGCTTCAAGTTCACCATATGCGACAGCACAAGATTCACGTCAGCTGCTTCCATCTGTT
GTTCAGTTACTCAAGAAGTATATGCCTGGGAAGAAGGTGGAAGATATCAACCATAATTAT
GTTGAGTGCTTGCTGTACACTTTTCATCATTTGGCTCATAAGACTCCAAACACAACAAAC
AGTCTATGTGGCTACAAGATTGTTACCGGGCAACCATCCGATAGACTTGGGGAGGACTTC
TCTGAGCATTACAAAGATTTTACGGAGAGGTTAATTGGAACAGAAGAGACGGTACGAGCA
GCCTCAAAGCGACTAACTCAGGGGATGGCAGATTTCAACAAGGCAATATCTTCAGCAAAA
ACTGAAGGGGAAAAGACTAAAATTAAAGGCGATCAGCAAACTTCAACAAGGACAATGAGG
TCATATAACAATATATTGTCAATGGCACAGTTGTTGCATTTGAAATCCCCTTTATTTATT
GGTGATAAGAAAATCACTCTATCATGGATGGAGCAGCCCAAGAAACCAGAAGCTACAACA
GCAAGGGGGAAGAGGTCACAACCTGCTACAAATGGGAATGGCCCTGCAAATAAGAAGGGG
AGAGGAGGAATGCAAAACCAGCTTGTGAACAGAGCTTTTGAAGGATTGTCTCGTGGTGGT
AGAGGCAGTGGAAGGGGGCAGGTCAGGGGTGGCCGAGGAAGAGGAAGAGGATGGGGTGGC
TACCGCTGA

Peptide Sequence

PEP ID

OQU84856
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:4:21449775:21461203:-1 gene:SORBI_3004G133700 transcript:OQU84856 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MAAAAAAADADAAEVERLYELGERLSSAKDKSEHAADYEAIIAAVKGQSVKAKQLAAQLI
PRFFRSFPALATRAMSAMFDLVDMEELAIRIQAIRGFPLLGKDTEFVSKIADVLGQLLTS
EENVERDAVHKALMSLIRQDVKNSLQPLFKHVEQGSEIREKIISFLRDKVFPLKAELLKP
QAEMERFITDLIKKSVQDVTGSEFELFMGFLRSLSIFGDTAPRESFQELIEIIQAQADLN
SQFNVSDIDHIERWISCMYMALPIFMRGGSASKFLNYFVKQIVPAFEKIPEEKKLDLLKT
IASSSPYATAQDSRQLLPSVVQLLKKYMPGKKVEDINHNYVECLLYTFHHLAHKTPNTTN
SLCGYKIVTGQPSDRLGEDFSEHYKDFTERLIGTEETVRAASKRLTQGMADFNKAISSAK
TEGEKTKIKGDQQTSTRTMRSYNNILSMAQLLHLKSPLFIGDKKITLSWMEQPKKPEATT
ARGKRSQPATNGNGPANKKGRGGMQNQLVNRAFEGLSRGGRGSGRGQVRGGRGRGRGWGG
YR

Transcript Sequence

Transcript ID

OQU84856
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:4:21449775:21461203:-1 gene:SORBI_3004G133700 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGCCCGGGCCTTGTCGGCCCATCCCGCATTCGGAAGTGTGGCGTGGATCCGTGGTCGG
TCAAAAAAACACGTTTTCACCCTTCCCTTCCCAGCTCCGTTCCCTCCCAAGCCCTAACTC
CCAAATCCCCCCGCTCTCCTCTAATGGCCGCCGCCGCCGCCGCCGCCGACGCCGACGCAG
CAGAGGTGGAGCGGCTTTACGAGCTCGGCGAGCGCCTCTCCTCCGCCAAGGACAAGTCCG
AGCATGCGGCGGACTACGAGGCGATTATTGCAGCGGTGAAGGGACAGAGTGTCAAGGCGA
AGCAGCTCGCAGCGCAGCTCATCCCCAGGTTCTTCCGGAGCTTCCCTGCACTCGCCACGC
GTGCCATGTCGGCCATGTTCGACCTCGTCGATATGGAGGAGCTCGCGATCAGAATACAAG
CTATTCGGGGGTTTCCACTTCTTGGCAAAGATACTGAATTTGTGTCAAAAATTGCAGATG
TTTTGGGACAACTCCTTACAAGTGAGGAAAATGTAGAGCGTGATGCTGTTCATAAAGCGC
TCATGTCCCTTATACGACAAGATGTTAAAAATTCTTTACAACCTTTATTTAAGCATGTGG
AGCAAGGATCAGAGATTCGTGAGAAGATTATTTCTTTTCTTCGAGACAAGGTCTTTCCTC
TTAAAGCAGAGCTACTGAAACCTCAAGCAGAAATGGAGAGATTTATAACAGATTTGATAA
AGAAAAGTGTGCAAGATGTAACTGGTTCAGAATTTGAACTATTCATGGGATTCCTGCGAA
GCTTGAGCATATTTGGGGATACTGCTCCTAGAGAGTCCTTTCAAGAACTAATTGAAATTA
TTCAAGCACAGGCTGATCTGAATTCACAATTCAATGTTTCTGACATTGACCACATTGAGA
GGTGGATTTCATGCATGTATATGGCTCTTCCAATCTTCATGAGAGGAGGATCAGCAAGCA
AGTTCCTCAATTACTTCGTCAAGCAAATTGTTCCAGCATTTGAGAAGATTCCTGAAGAAA
AGAAACTGGATTTGCTCAAGACTATTGCTTCAAGTTCACCATATGCGACAGCACAAGATT
CACGTCAGCTGCTTCCATCTGTTGTTCAGTTACTCAAGAAGTATATGCCTGGGAAGAAGG
TGGAAGATATCAACCATAATTATGTTGAGTGCTTGCTGTACACTTTTCATCATTTGGCTC
ATAAGACTCCAAACACAACAAACAGTCTATGTGGCTACAAGATTGTTACCGGGCAACCAT
CCGATAGACTTGGGGAGGACTTCTCTGAGCATTACAAAGATTTTACGGAGAGGTTAATTG
GAACAGAAGAGACGGTACGAGCAGCCTCAAAGCGACTAACTCAGGGGATGGCAGATTTCA
ACAAGGCAATATCTTCAGCAAAAACTGAAGGGGAAAAGACTAAAATTAAAGGCGATCAGC
AAACTTCAACAAGGACAATGAGGTCATATAACAATATATTGTCAATGGCACAGTTGTTGC
ATTTGAAATCCCCTTTATTTATTGGTGATAAGAAAATCACTCTATCATGGATGGAGCAGC
CCAAGAAACCAGAAGCTACAACAGCAAGGGGGAAGAGGTCACAACCTGCTACAAATGGGA
ATGGCCCTGCAAATAAGAAGGGGAGAGGAGGAATGCAAAACCAGCTTGTGAACAGAGCTT
TTGAAGGATTGTCTCGTGGTGGTAGAGGCAGTGGAAGGGGGCAGGTCAGGGGTGGCCGAG
GAAGAGGAAGAGGATGGGGTGGCTACCGCTGAGATGACCTGGAAACTCTGTTCAAACCTG
ACAAGGGATGAGCTTTCTGCTTCCACTTGAGAGTAAATGCAAAGGTCGATGTTTATTTGT
GTGCATTATCGCAATGAGTTCAAATTGATCAAGGCACACAACAGCAGAATGCCTGAGAAA
TGTCAGCAAGAGTTCATCTTTCCTATTCATTTACCATCTCATTGTGTTCTTTGCCACCGT
AACTGCTGTTTCACCTGTGTTGGCCGTTTGATGAAATGTCGGCAAGATCTGTGCATCTTT
CATATTCATTTACAATCTCATCGTCGTCTTTGCACCCCTAACAGTCGTTTTACCTGCGTT
GGCTGTTTGATAAGTGAACAGTTAGATATCGTTGTTCATTTATTTTGTTCGATTTTACCA
GTGTTTTAAGAGCTGAAGCTGACCAAGCTTCTGTGTTGGATTTTGTTAAAGTTCTATTAT
CCGATGTCCTGGCACAGATGTATTATTTAGCAACGGATCTAGTGCAAACTCATCTTCCGT
GTAAACTGTGCAAACTCTAATATGGACCGTAGAATGTTGATCCAAG