Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

OQU84824
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:4:16506022:16510351:1 gene:SORBI_3004G129500 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGAGGAGATGAGGGATATGGCACAATCAACCCTGGCGGTGGCGTCCGCGGCCGTGATC
TCATTGGTGCTCGGCGACGACAACCTCCTCGGCGAGATCCTCCTCCGCCTAGGGTTCGCC
ACCGACCTCGTCCGCGCCGCCGCCGTCTGTAGGCGTTGGCTCCGCGCCGCGTCCGACCCC
GTCTTCCTCCGCCGCTTCCGCGACCTCCACCCGCCCCGCCTCCACGGATTCTACATCGAC
AGCTATCCGAATCCGACCCTAAAACGGAGGTTTTACGCTGAATTTGTGCCGATGCAGCCT
CAGCCCCCAGAGCTCGCCGCCGTCCTCCGCCGGGGGCGCTTCAGCTTGGACACCTACGAC
AGCCAATCCACGCGCGTCCTGGACTGCCGGAACGGCAGAGTCATCGTCAGCTTGTTTTGC
GGCGGAGACTTCAAACGCGGAGTGCACAGCCCGCTCCATCCAGCGAGAGACTTGGTTATC
TTCCCGCAGCTCCCAAAGAAGGATGTCCCTGACAGTGACAGTTACAGCAGCAAAATCCGT
ATCTTCTATGAGATCCTCTCTAAAGAAAGTGTTGATGGGCTGTCCTACTTCGCGGTCTCA
TTGGATTATTGTGTCAATGAAGAGAAAGCTACAACGTGTGTATATAGGCTGCAAGATAAT
GCCTGGAGAATGCAAACTTCAGCTACAACACAGATTTCCGGATTGCAAGGGTCGTCGTTG
AAGCAATTGAGCATTTTCCTTGCTGAAGATAAAATCTACATGGGGATTACTATGCACAAC
ATTCTTGTTTTGGATTTGACATCCTCAACCTTCTCCACAATCAAGTTCCCTGACAAGATG
TCATTTGATGGACAAATCATATTGTCTCGGGCCAATGGCGCTGGGATTTATCTTAGCCAT
GTCAAGGACCTCCAACTTTGCATCTGGCTGCACATGGATTGCAATGGCAGCATAGGAGAC
TGGTTGCTGGTTGATACCATTTCTTTGCATGATTTGTGTGCTAATCTGAAAATATCGAAT
AGCAGCACCACTGAAGATGGGGATGACCCTGATAATGGGGATGACCTTGATGCTTATGTA
CATATGGTGGGGGGCAATGCAGAGTATGTATTCCTGGAGATGGATCGATATATTCTCTAT
TTGGATGTTAGGAGCAGGGCACTGCACAAGGTGCACACCGTGACAGAAAAGAATACATTG
ATTTCTTTTATTCATCCCTTTATGATGACCTGGCCTCCTGTATTTCCTGCACTGCAAGAA
TGA

Peptide Sequence

PEP ID

OQU84824
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:4:16506022:16510351:1 gene:SORBI_3004G129500 transcript:OQU84824 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MEEMRDMAQSTLAVASAAVISLVLGDDNLLGEILLRLGFATDLVRAAAVCRRWLRAASDP
VFLRRFRDLHPPRLHGFYIDSYPNPTLKRRFYAEFVPMQPQPPELAAVLRRGRFSLDTYD
SQSTRVLDCRNGRVIVSLFCGGDFKRGVHSPLHPARDLVIFPQLPKKDVPDSDSYSSKIR
IFYEILSKESVDGLSYFAVSLDYCVNEEKATTCVYRLQDNAWRMQTSATTQISGLQGSSL
KQLSIFLAEDKIYMGITMHNILVLDLTSSTFSTIKFPDKMSFDGQIILSRANGAGIYLSH
VKDLQLCIWLHMDCNGSIGDWLLVDTISLHDLCANLKISNSSTTEDGDDPDNGDDLDAYV
HMVGGNAEYVFLEMDRYILYLDVRSRALHKVHTVTEKNTLISFIHPFMMTWPPVFPALQE

Transcript Sequence

Transcript ID

OQU84824
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:4:16506022:16510351:1 gene:SORBI_3004G129500 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

AACTTTGGCACGGCCCAACCCAAGGCCGCCGAAGCTCCCGTTCTCTTCCCCCCCCACCCA
AATCGATCGCCATCCGCCGTTGTCTGCCGGCCTCTAAACCCTACATCCTCCTTGCGGTGC
TGCCACCCCCCTCTCCGAGTTTCGGCTGCTCGCTCGTGTTCCCCGATCGGGTTCCTCCGT
GGTCGCTCAGCAATGGAGGAGATGAGGGATATGGCACAATCAACCCTGGCGGTGGCGTCC
GCGGCCGTGATCTCATTGGTGCTCGGCGACGACAACCTCCTCGGCGAGATCCTCCTCCGC
CTAGGGTTCGCCACCGACCTCGTCCGCGCCGCCGCCGTCTGTAGGCGTTGGCTCCGCGCC
GCGTCCGACCCCGTCTTCCTCCGCCGCTTCCGCGACCTCCACCCGCCCCGCCTCCACGGA
TTCTACATCGACAGCTATCCGAATCCGACCCTAAAACGGAGGTTTTACGCTGAATTTGTG
CCGATGCAGCCTCAGCCCCCAGAGCTCGCCGCCGTCCTCCGCCGGGGGCGCTTCAGCTTG
GACACCTACGACAGCCAATCCACGCGCGTCCTGGACTGCCGGAACGGCAGAGTCATCGTC
AGCTTGTTTTGCGGCGGAGACTTCAAACGCGGAGTGCACAGCCCGCTCCATCCAGCGAGA
GACTTGGTTATCTTCCCGCAGCTCCCAAAGAAGGATGTCCCTGACAGTGACAGTTACAGC
AGCAAAATCCGTATCTTCTATGAGATCCTCTCTAAAGAAAGTGTTGATGGGCTGTCCTAC
TTCGCGGTCTCATTGGATTATTGTGTCAATGAAGAGAAAGCTACAACGTGTGTATATAGG
CTGCAAGATAATGCCTGGAGAATGCAAACTTCAGCTACAACACAGATTTCCGGATTGCAA
GGGTCGTCGTTGAAGCAATTGAGCATTTTCCTTGCTGAAGATAAAATCTACATGGGGATT
ACTATGCACAACATTCTTGTTTTGGATTTGACATCCTCAACCTTCTCCACAATCAAGTTC
CCTGACAAGATGTCATTTGATGGACAAATCATATTGTCTCGGGCCAATGGCGCTGGGATT
TATCTTAGCCATGTCAAGGACCTCCAACTTTGCATCTGGCTGCACATGGATTGCAATGGC
AGCATAGGAGACTGGTTGCTGGTTGATACCATTTCTTTGCATGATTTGTGTGCTAATCTG
AAAATATCGAATAGCAGCACCACTGAAGATGGGGATGACCCTGATAATGGGGATGACCTT
GATGCTTATGTACATATGGTGGGGGGCAATGCAGAGTATGTATTCCTGGAGATGGATCGA
TATATTCTCTATTTGGATGTTAGGAGCAGGGCACTGCACAAGGTGCACACCGTGACAGAA
AAGAATACATTGATTTCTTTTATTCATCCCTTTATGATGACCTGGCCTCCTGTATTTCCT
GCACTGCAAGAATGATTGCACGAGGTTTGTCTTCTATGAACTGCATAGTGCTATAGTGTA
GGGTAATGTTTTGCAATTTGCATTGTGGTAATGTGTTATCTTGTCCTTATAGGGCATCAT
CATAATCTGTTAGCTGTAGAATGATTGTAGTTTATTTTAGGTACATGATTTGTACCTTAG
GCTGTTTTGTCGTGTGCTTACTTAGCAACAATTTTAGTGCCTTTCCTGAACTATAAATAT
TAAAATCTTTTGCTGTGATCATTGTCAAAGCTATTTACGTGAGTTAACCAGGAGGATGAT
TTTTCATGTTTTTATTTACTTCTTAGCCAAGAATATCATGTGCACATAATCAATGTAAAG
ATGAAATTTGACAGATTTTTGGGTTCCCACCTTTATTTACAGTACTCCCTCCATCCCTTA
AAAAATTTTGTTATGGAGGTTTGTATAGTTTTGGCAAAGGAATTCGTTCTAGCTGGTTTA
CCATAACTAAGATGAGTTTTCCCTGTGGCCTTGCATGCAGTCATTAATGCGGCCTCCTTT
GTTTCCTGTGCGTGCAGTCATTATTGCGGCCTCCTTCGTTTCCCGTGCATGCAAAAATCG
CCGCACAGTCATTAATGTGGCCTTTTCGTTTCCAGCGGATGCAAAAATCACCTAAAAAAT
GAATGAGCGAGGAATCGAACCACGCCTGCTCGCCTAAGAGGGACCTCGGTAACCAACAGG
GTTCAGATGGATATTTGTTTAATGGATAGCCAATATGCTATTTAATAAAGGCAAACAGGA
AAAAATAGACCCTAATTAATCACTCCTTGGTATCCTAAATCATGTCCAAAACGAACTTAT
TTTTGGGATGGAGGGAGTATTATTATACTGCTAATTGGCAGGTGAGCAACAAATGAATAG
TACAGGAAAGAAAAAAAATTCTGGAGATCTATAATATCAACAATACGAATTACGACATTC
ACATTGTTTTCTCCCAGTATTTTCAGACATATAAGTTACTCAAGGCTTTCAATGTTTTTC
CATCATAGCAGTTAATCAAAGCTGATAAAGAGCTATATTGCATGGTAAATGACGAGAGGC
ATAACTCGTGTTAGTTGAGGTCGCGCACTTGCAACATGCAATTTAGTTTGTGAAAATTCA
TGGATATAGTGTGGATTGAGGTAGTAGTGATATAGCTTACCAAAGCCTGTTATATTTCAC
ACTTCACAGTAAGTTACCATAGATGAAGTTGTGCAGATTTTTGTATTATTCACTTATTCA
GTATATATGATACTGACCAAAGGCTACGGCGATCCATGGAAAAGAACAAACTGCGTTGTT
TTCTAATCACAGATTGCAGTATTTGCGATGCTAATTTTTTGCCGCTAGCTAAAAGTGACT
TTCTGCCAACTTTTGTCTTCCTTCTTGATCACATGGGACCAAGTTCACTAGCTCATTGGC
TCTTGTCTAGCTCATAGTTATGTCCTTAAGTTGTTGCTGGAGTTTTCATATGCTCATTCA
GTCATTCTCCACATGGTGTGCCTGTTTTGGAATTTGTTGTGTAAGAACTATATTTACCTG
ATGTTCTCATGTTAATTATTGTTGAATGGAAATGCCATATATGAGAACGGAGATTTTTAA
GAATTAAGATTGAAATTGATAGGGAACAAATATGATGTTCAATTCTCTGCAATGTATCAA
CGGTTTGACATTGCTAATCACAATTTGCTATTATAAGAATGTAATCCTTTTCATCTTGAA
GTAATATTATGATGGTTGTTAAGGTAGATATTCTACTAACATTTGCATGCTGCTAGGTAA
GGGGCACTTCAACGTTTAAATGGAGGTGGCATGAGAATCTTCAGAAAGAGAGGCAACAGA
TGAATTGCTGATTTGTCGGTTGCAGTAGTGCCAATTACTATATAATAATAGGAGTGCCGT
ATGTAATGTGACTTGAGGGCAAGAGGTTGACTTATGTAATGTGACTTGAGGGCAAGAGGT
TGACTTAATTAGCTGTTTTACATACCTGCATTTATGTTTGAAGTTTTATCAGGACTGAAG
GCCAGAGTGTACAATGTTGGTTTATGCTCGTAGTGTTTTCAGACCAATAGTTGGTTTATT
TATGTTCGTTTTGTGTTCTGTTCTAGTGCATAGGTCCAGATCAAGTTTTGGTTATCCAAT
GGTTATATATGTGCCAGCTCATGTGAAATACAGTGCTGCACAGGCTATCAGCTAGGTATG
CCAGACATGTCTGAGGGTTATATGATGCAAGCTCATGTGAAATTGAGTTCAAGAATGTCT
GTCCAAGTATTGCTCCTGCAGAACAGATTATATTGTGTGCTGTTTGTTTAAAGAACAACA
GTTCATTAAAGCACAACAGTATGATGTTTGGATGTGCAATGTACTTAGGGCACTCACAAT
GCATACTCTATCATAGAGTCTAAAGTTATTTATTACCTCGAATAATGTGGACTTAGAGTC
TAAATAAGACTTGGAGTCTTATTGTTTCTACCTCTTTCTTCAATAAATATGCTGCCACAT
CAGCAAAATACCATAAAAAATATATAATTAATTTGTCTTGGACTCTGTGATAGAGTCTTG
CATTGGGAGTGCCCTTATCACCTGCTGAGACGTTCACTGATTATGGATATCTTGCCTGGT
GAAGCTCATAGGGCGGCAGCTCTGTGCGAAGAAAGCAATTAGGCGAAGAGCATCTCCGGG
CTACCTAAACAGTCTCTCTTACGCTTGTATTTGAGTAGCGGAGGAAAAAAACACCTATTT
ACCCTCTACTCTATATATTTTAGTGGAGCAAAAGAAAACCATCTCCAACTGGATGCCTTG
CCCTTCGGATCTCCAACAAGCTATCTATTTGGTCCATCGATTTGTTGCTACCTAAATTCT
CTCTATGCTA