Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

OQU84545
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:4:6033605:6036660:-1 gene:SORBI_3004G074400 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGCAGAGGCAGCAGTAGTCCTAGCTCTTAGCAAACTTGTTACCTCTTTTGGAATGGCA
TCACTGCAGTCTCTCGTAAAGAAAGAAGCCACACCATCGCCAGATTTAACACGGACTGCA
AAACGCATCGAGAGGGAATTGGACATGATTCATCATTTCTTAAGCCAAGTTGGGTCAAAA
ATCTACAGCAATAAAGTTCTTGAAGGCTGGATAGTGAGGGTGCGGAAGGTTGCATATTGT
GTTGAGGACATAATAGATGACTACTGTTATAACATCACTCTCTTACAGGAAGAAGGCTAT
TTCAAGAGGGTGGTACACACAACCTACTATGCAAATATTTTTCACGGCATTGCTTCAGGA
ATGAAAGACATTGAGGAAGAGATCAAACACCTGTCACAGCTCAAAAGAGACTACAGAGAA
ATGTTCAATGAGTTACTTGATAACACAAGTAACAACACTCAAGTTCAATCCCCAACAAAT
AGTGAGAACCCTCATGCCATTAAAGTAGAGGGCATTGTTGGCATGAAGGAAGACATGGAA
CTGCTGCGCGAATGGCTAGATCCCAAGGAAACCAATCTTGTAGTAATATCAGTGTGGGGT
TTTGGTGGACTAGGCAAAACTACCCTTGTCAGGAAGGTATATGATTTGGAGATGGAACGA
AAAAGTTTTGATTGTTATGCATGGATTGCAATATCACATAACTATGGCATTATTGTTACA
TTGAGGCAGTTGATTCAGGAGTTAAATGAGGACCAAGGCAAAATTCCTGCCGACCTTGGC
ACTATGCACTATAACAAGCTCAATGATACATTAAGGGGAGTGTTGTCAAATAAGAGGTAC
TTGATTGTACTCGATGATGTTTGGGATACAAGAGCTTTTAACGAGTTGTCTGACCTATTA
ATGGATGACCACAAAGGCAGTCGGATAATTATCACAACTAGGAATAATGATGTTGCTTCA
CTGGCTCAAGAAATGTACAAGATGAAGCTTAAGCCACTCAGCAGTGATGATGCATTTGAA
CTATTTTGTAGAAGGACTTTTCAGAATAGCAACATGGAGTGCCCTTCTCATCTCAATGAA
TTATCTAGGCAGATTGTGAGCAAGTGTGGAGGCTTGCCACTTGCAATTAATGCAATAGGA
AATGTACTAACTGTACAAGAACCAGACGAGATAACATGGAGAAGAATGGATAATCAGTTT
AAATGTGAGTTGGAGGACAACCCTAGCCTAGGCAAAGTAAGAAGTGCACTAAGCATAAGC
TTCACGTACCTGCCAAGACACCTCAAGAACTGTTTTTTGTATTGCAGCATGTTCCCACAA
GATTATCTTTTCACACGTGAGCAGCTTGTCAAGCTATGGATAGTCGAGGGTTTTGTTTCA
CACAGAGGGCAAAGTACATTGGAGGAGGTTGCAGATGGCTACTTCACTGAGTTGATCCAT
CAAAGCATGCTGCAACTTGTGGAGAACGATGAGATTGGCAGAGTAGTAACCTGCAGGATG
CATGGCATTGTGCGAGAATTGGCTCTCTCATTTTCTAGGAAGGAAAGATTTGGTCTGGCA
GAAATAACCAATCTGGTACATGAGAACAAGGACGATGTTCGTCGATTATTATTGTCAAAC
TCAAATCAGGTGAATCAGCTGATTAGATCAAGAATGGATCTTCCACACCTTCGAACATTC
ATCGCAACCAGTGCAGTAGCAAATGACCAGTTGCTGTGCTTACTGATTTCCAAGTATAAA
TACCTTTCTGTTCTGGAGATGCGAGACTCACACATTGACAAGATCCCAGATAATATTGGG
GATTTGTTCAACTTGCGCTACCTTTGCCTGAGGAGAACGCGTGTTAAGTCCCTTCCAAGA
TCAATTAAAAGGCTTTCGAATTTGGAAACTCTGGACCTGAAGTCAACTGGCATTGAAACT
CTGCCAAGAGAAGTATCCAGGCTCAAGAAACTGAGGCACATATTTGCTGAGAAATTGGCT
GATACAAAACAGCAGCATTTACGCTACTTTCAAGGTGTGAAGTTTCCAGACGGAATTTTT
GATTTGGTAGAGCTGCAAACTCTCAAGACTGTTGAAGCAACCAAGAAATCAGTGGAGCTA
TTGAAACAACTACCTGAGTTGAGGCTTCTATGTGTTGAGAATGTGCGGCGTGCTGACTGT
GCAACACTGTTTGCATCTATCTCAAACATGCACCACCTGTATAACTTGCTCATCAGCGCC
AACAATCTAGATGAACCTCTGAATTTTGATGCTTTCAATCCTAGACATACACAATTAGAA
AAACTCATTATCAGAGGATGCTGGGACAATGAGGCCTTCAGGGGACCCGTGTTCTGTGAG
TATGGTATCAACATCAAATATCTGACACTAAGCTTCTGCAAAAATAATGCCGATCCACTG
TCCTCAATCTCCTTGAGCATGCCAAATCTGATATTCTTGAGCATCCGCAAGGAATGCTGG
GCTGAGGATATAATACTACATGCGGGATGGTTTCCTCAGCTAAAAACCCTTTACATGGAG
AACCTGGATCGAGTAAAGAGGCTATTTATTGAGGAAGGTGCGCTTGTCAGGCTTGAAGTG
CTGCTTCTCTTGTCTCTAACGTCTCTCAAGGAAGTTCCTAAAGGTTTGGAGCTTGTTTCA
TCCCTCAGAAAGCTTAATGTCTCGATGCAGCCCCCTGAATTCAAGGTAGAGTGGGAAAGA
GACAATTGGAGGATGAAGCTGCACCATGTCAAAGAAATACGCGTGTGA

Peptide Sequence

PEP ID

OQU84545
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:4:6033605:6036660:-1 gene:SORBI_3004G074400 transcript:OQU84545 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MAEAAVVLALSKLVTSFGMASLQSLVKKEATPSPDLTRTAKRIERELDMIHHFLSQVGSK
IYSNKVLEGWIVRVRKVAYCVEDIIDDYCYNITLLQEEGYFKRVVHTTYYANIFHGIASG
MKDIEEEIKHLSQLKRDYREMFNELLDNTSNNTQVQSPTNSENPHAIKVEGIVGMKEDME
LLREWLDPKETNLVVISVWGFGGLGKTTLVRKVYDLEMERKSFDCYAWIAISHNYGIIVT
LRQLIQELNEDQGKIPADLGTMHYNKLNDTLRGVLSNKRYLIVLDDVWDTRAFNELSDLL
MDDHKGSRIIITTRNNDVASLAQEMYKMKLKPLSSDDAFELFCRRTFQNSNMECPSHLNE
LSRQIVSKCGGLPLAINAIGNVLTVQEPDEITWRRMDNQFKCELEDNPSLGKVRSALSIS
FTYLPRHLKNCFLYCSMFPQDYLFTREQLVKLWIVEGFVSHRGQSTLEEVADGYFTELIH
QSMLQLVENDEIGRVVTCRMHGIVRELALSFSRKERFGLAEITNLVHENKDDVRRLLLSN
SNQVNQLIRSRMDLPHLRTFIATSAVANDQLLCLLISKYKYLSVLEMRDSHIDKIPDNIG
DLFNLRYLCLRRTRVKSLPRSIKRLSNLETLDLKSTGIETLPREVSRLKKLRHIFAEKLA
DTKQQHLRYFQGVKFPDGIFDLVELQTLKTVEATKKSVELLKQLPELRLLCVENVRRADC
ATLFASISNMHHLYNLLISANNLDEPLNFDAFNPRHTQLEKLIIRGCWDNEAFRGPVFCE
YGINIKYLTLSFCKNNADPLSSISLSMPNLIFLSIRKECWAEDIILHAGWFPQLKTLYME
NLDRVKRLFIEEGALVRLEVLLLLSLTSLKEVPKGLELVSSLRKLNVSMQPPEFKVEWER
DNWRMKLHHVKEIRV

Transcript Sequence

Transcript ID

OQU84545
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:4:6033605:6036660:-1 gene:SORBI_3004G074400 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

GATCAGTGAAGAACATAAATGAAGGTGAAATCTGGTTGAGTAAACTAGCATATCCAAAAG
ACCACATCATTAGTGAAGAAGACAAAATATGGCAGAGGCAGCAGTAGTCCTAGCTCTTAG
CAAACTTGTTACCTCTTTTGGAATGGCATCACTGCAGTCTCTCGTAAAGAAAGAAGCCAC
ACCATCGCCAGATTTAACACGGACTGCAAAACGCATCGAGAGGGAATTGGACATGATTCA
TCATTTCTTAAGCCAAGTTGGGTCAAAAATCTACAGCAATAAAGTTCTTGAAGGCTGGAT
AGTGAGGGTGCGGAAGGTTGCATATTGTGTTGAGGACATAATAGATGACTACTGTTATAA
CATCACTCTCTTACAGGAAGAAGGCTATTTCAAGAGGGTGGTACACACAACCTACTATGC
AAATATTTTTCACGGCATTGCTTCAGGAATGAAAGACATTGAGGAAGAGATCAAACACCT
GTCACAGCTCAAAAGAGACTACAGAGAAATGTTCAATGAGTTACTTGATAACACAAGTAA
CAACACTCAAGTTCAATCCCCAACAAATAGTGAGAACCCTCATGCCATTAAAGTAGAGGG
CATTGTTGGCATGAAGGAAGACATGGAACTGCTGCGCGAATGGCTAGATCCCAAGGAAAC
CAATCTTGTAGTAATATCAGTGTGGGGTTTTGGTGGACTAGGCAAAACTACCCTTGTCAG
GAAGGTATATGATTTGGAGATGGAACGAAAAAGTTTTGATTGTTATGCATGGATTGCAAT
ATCACATAACTATGGCATTATTGTTACATTGAGGCAGTTGATTCAGGAGTTAAATGAGGA
CCAAGGCAAAATTCCTGCCGACCTTGGCACTATGCACTATAACAAGCTCAATGATACATT
AAGGGGAGTGTTGTCAAATAAGAGGTACTTGATTGTACTCGATGATGTTTGGGATACAAG
AGCTTTTAACGAGTTGTCTGACCTATTAATGGATGACCACAAAGGCAGTCGGATAATTAT
CACAACTAGGAATAATGATGTTGCTTCACTGGCTCAAGAAATGTACAAGATGAAGCTTAA
GCCACTCAGCAGTGATGATGCATTTGAACTATTTTGTAGAAGGACTTTTCAGAATAGCAA
CATGGAGTGCCCTTCTCATCTCAATGAATTATCTAGGCAGATTGTGAGCAAGTGTGGAGG
CTTGCCACTTGCAATTAATGCAATAGGAAATGTACTAACTGTACAAGAACCAGACGAGAT
AACATGGAGAAGAATGGATAATCAGTTTAAATGTGAGTTGGAGGACAACCCTAGCCTAGG
CAAAGTAAGAAGTGCACTAAGCATAAGCTTCACGTACCTGCCAAGACACCTCAAGAACTG
TTTTTTGTATTGCAGCATGTTCCCACAAGATTATCTTTTCACACGTGAGCAGCTTGTCAA
GCTATGGATAGTCGAGGGTTTTGTTTCACACAGAGGGCAAAGTACATTGGAGGAGGTTGC
AGATGGCTACTTCACTGAGTTGATCCATCAAAGCATGCTGCAACTTGTGGAGAACGATGA
GATTGGCAGAGTAGTAACCTGCAGGATGCATGGCATTGTGCGAGAATTGGCTCTCTCATT
TTCTAGGAAGGAAAGATTTGGTCTGGCAGAAATAACCAATCTGGTACATGAGAACAAGGA
CGATGTTCGTCGATTATTATTGTCAAACTCAAATCAGGTGAATCAGCTGATTAGATCAAG
AATGGATCTTCCACACCTTCGAACATTCATCGCAACCAGTGCAGTAGCAAATGACCAGTT
GCTGTGCTTACTGATTTCCAAGTATAAATACCTTTCTGTTCTGGAGATGCGAGACTCACA
CATTGACAAGATCCCAGATAATATTGGGGATTTGTTCAACTTGCGCTACCTTTGCCTGAG
GAGAACGCGTGTTAAGTCCCTTCCAAGATCAATTAAAAGGCTTTCGAATTTGGAAACTCT
GGACCTGAAGTCAACTGGCATTGAAACTCTGCCAAGAGAAGTATCCAGGCTCAAGAAACT
GAGGCACATATTTGCTGAGAAATTGGCTGATACAAAACAGCAGCATTTACGCTACTTTCA
AGGTGTGAAGTTTCCAGACGGAATTTTTGATTTGGTAGAGCTGCAAACTCTCAAGACTGT
TGAAGCAACCAAGAAATCAGTGGAGCTATTGAAACAACTACCTGAGTTGAGGCTTCTATG
TGTTGAGAATGTGCGGCGTGCTGACTGTGCAACACTGTTTGCATCTATCTCAAACATGCA
CCACCTGTATAACTTGCTCATCAGCGCCAACAATCTAGATGAACCTCTGAATTTTGATGC
TTTCAATCCTAGACATACACAATTAGAAAAACTCATTATCAGAGGATGCTGGGACAATGA
GGCCTTCAGGGGACCCGTGTTCTGTGAGTATGGTATCAACATCAAATATCTGACACTAAG
CTTCTGCAAAAATAATGCCGATCCACTGTCCTCAATCTCCTTGAGCATGCCAAATCTGAT
ATTCTTGAGCATCCGCAAGGAATGCTGGGCTGAGGATATAATACTACATGCGGGATGGTT
TCCTCAGCTAAAAACCCTTTACATGGAGAACCTGGATCGAGTAAAGAGGCTATTTATTGA
GGAAGGTGCGCTTGTCAGGCTTGAAGTGCTGCTTCTCTTGTCTCTAACGTCTCTCAAGGA
AGTTCCTAAAGGTTTGGAGCTTGTTTCATCCCTCAGAAAGCTTAATGTCTCGATGCAGCC
CCCTGAATTCAAGGTAGAGTGGGAAAGAGACAATTGGAGGATGAAGCTGCACCATGTCAA
AGAAATACGCGTGTGAGAAAAAGTAATTGGTTGATCAGTCATTAGTTACTGCTAGTCATG
GTATTACTGATATTTACCAGCTAAGATATGTACTTATTCTTGTCTGTTATGTTTCCTCCA
AATCTCAATGCTCATATATACAGGAATTTTGTTTTATATAGTTTGTTCATGTAGTGCTGA
CAATGAGGTGCCAAAATATTGTTTGTTACCACAGTATATTATAGCTGTGCATTTGT