Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

OQU84419
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:4:4010028:4013670:1 gene:SORBI_3004G049600 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGTTCTTGGATGGATGCAGGTGGATAGAATATGGTCAATTTGCTTACCAGACATGGTT
GGTGCAGAGGAAATATTGGGAAATTTACTGCAATTTGCTTCAGATGAACTATTGAGTCAG
TCATCAGAGAATGCTTTGAAGGCAATGCTGTTTCTGGAGTTTCTATCTCTTCTTTCCCCT
GAAAAATTATCCATTACCTATGATTGTATCCATGCAAACTACTTCAGTTTGGGCATTCCA
CAAGAATTCAGTGTTTCACTGGCAACCTACATTGAGAGCCATCAGTTGTTGCTTGGTCCG
AACTTTTATGCAAGGCGGCATTTGGCTGACAACTCAATTGGAGATGCTCCTTCCATGGCT
CCAGAATTTGCGCCGTCCATGTCCTCTGGCGATGAAGTGAAGTTTCCTCAATCTGTTACA
GAAACACCATATGCGCCTTCCAGCTCTCACAACAATGAAAATACCAACCAACCTCATCAC
AGTAAACCTGCACAGAAGCATCAGGGAGTGCCTCCAATTTCACTTCTGGAGAAGCATAAG
GACTATGTTAGATTAGTCTTGATCGTGGTTCTTCCAACAGCGGCGTTCTCATTCATTGTT
GCATTTCTAATTTTCTACTGCTGTGGATGCAACAAGAACAAGGTCTCTGTCAGTGAGCAA
CGAGATGATCATCCTCTTCTTCACATGCAGTTGGCTAATATGCCTGGTTCATCACCCGAT
GTCCGTGTTCCTGCGAATCCACTTCACAAGGATAATCAAAGTTATTCTGGAGTCAGCATA
AGTCAGTGCTTTTCATGCTGTTTTAAAAGATCAATTGATGCCACACTACCTTCAGAAGCG
ATTGGAGGAACACCAGAGAATAATGTCACAAGTGATGCTCCTAAACCGATGCCACCTCCA
CCTCCTCCACCTTTGCCACCTCCGATCAAAAAGACTCCTCCTCCCCCACCTGGACCTCCC
AAAGGTTCTAAAGCAAGACTTGCTCAGCTGTCACCTGTTGAGTCAAGTCGTTCTGAAGGA
TCATCTGCCGGCGAGCAGACCAGCGAATCATCTGAAGCAGAAGTTAATGCTCCAAGAGCC
AAGCTTCGACCTTTCTATTGGGACAAAGTTCTTGCTAATCCTGATCAGTCAATGGCATGG
CATGATATCAAATTTGGTTCTTTTCATGTGAATGAGGATATGATAGAGGAATTGTTTGGT
TATAGTGGTGGCAACGGAAACAACCTCAAGGATAAGGAACTCCCCTCTGCGGATCCTGCA
TCTCAGCACATTTCTCTGCTCAATGTTAAGAAATCATGCAACCTGGCAGTTGTTTTTAAG
GCAATGAATATCAGGGTACAAGACATTCATGACGCTCTTATTGAAGGGAATGAACTTCCT
AGGGTGCTTCTTGAGACAATCTTGAGAATGAAGCCAACTGACGAGGAGGAGCAGAAGCTC
AGGCTTTATAATGGGGATTTCTCGCAGCTAGGCCTTGCAGAACAAGTGATGAAGGCACTA
ATTGACACTCCTTTTGCTTTCAAGAGGGTTGGCACGTTGCTTTTCATGTCCTCCTTGCAA
GAAGATGCTTCAAGTCTTAGGGATTCATTCCACCAGTTGGAGGCTGCTTGTGGGGAACTA
AAGCACCGCCTTTTTCTGAAATTACTAGAAGCTGTTCTCAAAACCGGAAACCGTTTGAAT
GATGGGACCTTCCGTGGTGGTGCTAATGCATTCAAGCTTGACACTCTTCTGAAGTTATCA
GATGTCAAGGGTGCTGATGGAAAGACCACATTGCTACACTTTGTTATTCAAGAGATTATT
CGGTCTGAAGGTGTCCGTGAAGCAAGGTTAGCCATGGAAAGTGGAAGAAGTCTAACTCAT
AGTACTCCAGACGACAATTCCAACAGATCTATTGAAGAGGATGGCGATTACTACTGTAAC
CGTGGCCTTAGCATTGTGTCAGGACTTAGTAGTGAGATGGACAATGTCAAGAGGGTAGCT
GCACTAGATGCTGAACCTTTGTTTGCCACTGTGGTAACCCTCAGACAAGAGTTACTGAAA
TCAAAGGAGTTCCTGAATGAAATTGCAACAATAGAAGAGACGAGTGGATTCCGACGCTCA
TTGGAATGTTTTGTGGAACATGCAGATAACGAGACAAATTTTTTTATGAAAGAAGAGAAG
CGGTTGAGATCATTAGTGAAGAAAACAATCCGATATTTCCATGGAAATGACTCTAAAGAT
GACAGTTTTCGGTTGTTTGTGATTGTAAGAGATTTCTTGGTGATGCTTGATAAGGCATGC
AAGGAAGTTGGGGCATCACAGAAGAAGGGTACAAATAAATCACGGAGCAGTGGCAATGGC
AACCCTACGTTCCCGTCACTCCTACAGGAGCAACAGTTCCCTGCTGTTATTGATGGCCAT
TCAGATAGTTCACGTTCTAACGATTAA

Peptide Sequence

PEP ID

OQU84419
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:4:4010028:4013670:1 gene:SORBI_3004G049600 transcript:OQU84419 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MVLGWMQVDRIWSICLPDMVGAEEILGNLLQFASDELLSQSSENALKAMLFLEFLSLLSP
EKLSITYDCIHANYFSLGIPQEFSVSLATYIESHQLLLGPNFYARRHLADNSIGDAPSMA
PEFAPSMSSGDEVKFPQSVTETPYAPSSSHNNENTNQPHHSKPAQKHQGVPPISLLEKHK
DYVRLVLIVVLPTAAFSFIVAFLIFYCCGCNKNKVSVSEQRDDHPLLHMQLANMPGSSPD
VRVPANPLHKDNQSYSGVSISQCFSCCFKRSIDATLPSEAIGGTPENNVTSDAPKPMPPP
PPPPLPPPIKKTPPPPPGPPKGSKARLAQLSPVESSRSEGSSAGEQTSESSEAEVNAPRA
KLRPFYWDKVLANPDQSMAWHDIKFGSFHVNEDMIEELFGYSGGNGNNLKDKELPSADPA
SQHISLLNVKKSCNLAVVFKAMNIRVQDIHDALIEGNELPRVLLETILRMKPTDEEEQKL
RLYNGDFSQLGLAEQVMKALIDTPFAFKRVGTLLFMSSLQEDASSLRDSFHQLEAACGEL
KHRLFLKLLEAVLKTGNRLNDGTFRGGANAFKLDTLLKLSDVKGADGKTTLLHFVIQEII
RSEGVREARLAMESGRSLTHSTPDDNSNRSIEEDGDYYCNRGLSIVSGLSSEMDNVKRVA
ALDAEPLFATVVTLRQELLKSKEFLNEIATIEETSGFRRSLECFVEHADNETNFFMKEEK
RLRSLVKKTIRYFHGNDSKDDSFRLFVIVRDFLVMLDKACKEVGASQKKGTNKSRSSGNG
NPTFPSLLQEQQFPAVIDGHSDSSRSND

Transcript Sequence

Transcript ID

OQU84419
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:4:4010028:4013670:1 gene:SORBI_3004G049600 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGTTCTTGGATGGATGCAGGTGGATAGAATATGGTCAATTTGCTTACCAGACATGGTT
GGTGCAGAGGAAATATTGGGAAATTTACTGCAATTTGCTTCAGATGAACTATTGAGTCAG
TCATCAGAGAATGCTTTGAAGGCAATGCTGTTTCTGGAGTTTCTATCTCTTCTTTCCCCT
GAAAAATTATCCATTACCTATGATTGTATCCATGCAAACTACTTCAGTTTGGGCATTCCA
CAAGAATTCAGTGTTTCACTGGCAACCTACATTGAGAGCCATCAGTTGTTGCTTGGTCCG
AACTTTTATGCAAGGCGGCATTTGGCTGACAACTCAATTGGAGATGCTCCTTCCATGGCT
CCAGAATTTGCGCCGTCCATGTCCTCTGGCGATGAAGTGAAGTTTCCTCAATCTGTTACA
GAAACACCATATGCGCCTTCCAGCTCTCACAACAATGAAAATACCAACCAACCTCATCAC
AGTAAACCTGCACAGAAGCATCAGGGAGTGCCTCCAATTTCACTTCTGGAGAAGCATAAG
GACTATGTTAGATTAGTCTTGATCGTGGTTCTTCCAACAGCGGCGTTCTCATTCATTGTT
GCATTTCTAATTTTCTACTGCTGTGGATGCAACAAGAACAAGGTCTCTGTCAGTGAGCAA
CGAGATGATCATCCTCTTCTTCACATGCAGTTGGCTAATATGCCTGGTTCATCACCCGAT
GTCCGTGTTCCTGCGAATCCACTTCACAAGGATAATCAAAGTTATTCTGGAGTCAGCATA
AGTCAGTGCTTTTCATGCTGTTTTAAAAGATCAATTGATGCCACACTACCTTCAGAAGCG
ATTGGAGGAACACCAGAGAATAATGTCACAAGTGATGCTCCTAAACCGATGCCACCTCCA
CCTCCTCCACCTTTGCCACCTCCGATCAAAAAGACTCCTCCTCCCCCACCTGGACCTCCC
AAAGGTTCTAAAGCAAGACTTGCTCAGCTGTCACCTGTTGAGTCAAGTCGTTCTGAAGGA
TCATCTGCCGGCGAGCAGACCAGCGAATCATCTGAAGCAGAAGTTAATGCTCCAAGAGCC
AAGCTTCGACCTTTCTATTGGGACAAAGTTCTTGCTAATCCTGATCAGTCAATGGCATGG
CATGATATCAAATTTGGTTCTTTTCATGTGAATGAGGATATGATAGAGGAATTGTTTGGT
TATAGTGGTGGCAACGGAAACAACCTCAAGGATAAGGAACTCCCCTCTGCGGATCCTGCA
TCTCAGCACATTTCTCTGCTCAATGTTAAGAAATCATGCAACCTGGCAGTTGTTTTTAAG
GCAATGAATATCAGGGTACAAGACATTCATGACGCTCTTATTGAAGGGAATGAACTTCCT
AGGGTGCTTCTTGAGACAATCTTGAGAATGAAGCCAACTGACGAGGAGGAGCAGAAGCTC
AGGCTTTATAATGGGGATTTCTCGCAGCTAGGCCTTGCAGAACAAGTGATGAAGGCACTA
ATTGACACTCCTTTTGCTTTCAAGAGGGTTGGCACGTTGCTTTTCATGTCCTCCTTGCAA
GAAGATGCTTCAAGTCTTAGGGATTCATTCCACCAGTTGGAGGCTGCTTGTGGGGAACTA
AAGCACCGCCTTTTTCTGAAATTACTAGAAGCTGTTCTCAAAACCGGAAACCGTTTGAAT
GATGGGACCTTCCGTGGTGGTGCTAATGCATTCAAGCTTGACACTCTTCTGAAGTTATCA
GATGTCAAGGGTGCTGATGGAAAGACCACATTGCTACACTTTGTTATTCAAGAGATTATT
CGGTCTGAAGGTGTCCGTGAAGCAAGGTTAGCCATGGAAAGTGGAAGAAGTCTAACTCAT
AGTACTCCAGACGACAATTCCAACAGATCTATTGAAGAGGATGGCGATTACTACTGTAAC
CGTGGCCTTAGCATTGTGTCAGGACTTAGTAGTGAGATGGACAATGTCAAGAGGGTAGCT
GCACTAGATGCTGAACCTTTGTTTGCCACTGTGGTAACCCTCAGACAAGAGTTACTGAAA
TCAAAGGAGTTCCTGAATGAAATTGCAACAATAGAAGAGACGAGTGGATTCCGACGCTCA
TTGGAATGTTTTGTGGAACATGCAGATAACGAGACAAATTTTTTTATGAAAGAAGAGAAG
CGGTTGAGATCATTAGTGAAGAAAACAATCCGATATTTCCATGGAAATGACTCTAAAGAT
GACAGTTTTCGGTTGTTTGTGATTGTAAGAGATTTCTTGGTGATGCTTGATAAGGCATGC
AAGGAAGTTGGGGCATCACAGAAGAAGGGTACAAATAAATCACGGAGCAGTGGCAATGGC
AACCCTACGTTCCCGTCACTCCTACAGGAGCAACAGTTCCCTGCTGTTATTGATGGCCAT
TCAGATAGTTCACGTTCTAACGATTAA