Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

OQU84412
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:4:3834744:3839043:-1 gene:SORBI_3004G047100 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGAGATCGCGCGAGCGGCTGCTGGCGTGGCCTGCTCCAAGGAGCACCAGAGGATCTAC
GCCGAGTGGTTCGCCCTCGCAGACCCAGATGGCGATGGCCGCGTCACGGGCGCCGATGCC
ACCAGCTTCTTCGGAATGTCCGCGCTCTCACGCGCCGATCTCAAGCAGGTATGGGCGATC
GCGGATTCCAAGCGGCAGGGGTACCTCGGATTCGCCGAGTTCGTCACAGCAATGCAGCTC
GTGTCTCTGGCCCAAGCAGGGAACGAGATCACAGAGGACAGTCTGAAACGTGAAGACCTG
AGCACCTTGGATCCGCCTGTGATGGAAGGTGTCGATGGACTACTGGCTAGATCCAAGGCT
GTTGTGAAGAGAATTCACCCAGATGACAATGGCACCGCTCAGGTCCAAGCACCTTCCATG
TATCACTGGTTTGGTTCAAAAGCAGCACAGAAGGTGCAGATGCCTCTGACTGCTGTTACC
TCTGTAATTGATGGCTTGAAAAGACTATATGTTGAAAAACTGAAGCCATTGGAAGTCGCT
TACAGATACAATGATTTTGCTTCCCCATTATTGACAAACAGTGATTTTGATGCAAAGCCA
ATGGTTATGCTCTTGGGTCAGTATTCAACAGGGAAAACAACATTCATTAAGCATCTGCTG
AAGACAAGCTACCCAGGAGCTCACGTCGGACCAGAGCCAACCACTGATAGATTCGTAGTT
GTCATGTCAGGATCTGATGGAAGGACCATTCCAGGCAATACTATTGCTGTTCAAGCCGAC
ATGCCATTCACTGGTCTTACAACATTTGGGGGAGCATTTCTGTCAAAGTTTGAATGCTCT
CAGATGCCACATCCGCTTCTAGAGCATATCACCTTTGTGGACACTCCTGGTGTCCTCTCT
GGGGAAAAGCAACGGACGCAACGTAGCTATGATTTCACTGGTGTAACCTCATGGTTTGCT
GCTAAGTGTGACCTTATTCTTCTTCTGTTTGACCCTCACAAGCTTGATATAAGTGATGAG
TTCAAACGTGTCATTTCATCCTTACGTGGTCATGATGACAAAATACGCGTAGTGTTGAAC
AAGGCTGACCAAGTGGACACACAGCAGCTTATGAGAGTATACGGTGCATTGATGTGGTCT
CTTGGGAAAGTGCTAAATACTCCTGAGGTTGTGCGTGTGTATATCGGGTCCTTCAACGAT
AAGCCAGTGAATGATTCAGCTGTTGGACCAATTGGAAAAGACTTGTTTGAGAGGGAGCAA
GATGACCTACTGTGTGACCTGAAAGACATTCCTAAGAAAGCTTGTGATCGACGGGTCAAT
GAGTTTGTTAAGCGTGCTCGAGCTGCCAAGATCCATGCTTACATAATTGGCCATCTGAAG
AAGGAGATGCCTGCAATGATGGGAAAAGCTAAGGCTCAGCAGCGACTCATAGACAACTTA
GGGGAGGAGTTTGCCAAGGTGCAGAGGGAATACCATCTCCCCGCCGGAGACTTCCCCGAC
GTGGAGCACTTCAAACAGGTGCTGGGTGGGTACAGCATCGACAAGTTCGAGAAGCTGAAG
CCCAAGATGGTGCAGGCGGTGGACGACATGCTTGCTCACGACATCCCGGAGCTCCTCAAG
AACTTCAGGAACCCGTACGAGTGA

Peptide Sequence

PEP ID

OQU84412
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:4:3834744:3839043:-1 gene:SORBI_3004G047100 transcript:OQU84412 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MEIARAAAGVACSKEHQRIYAEWFALADPDGDGRVTGADATSFFGMSALSRADLKQVWAI
ADSKRQGYLGFAEFVTAMQLVSLAQAGNEITEDSLKREDLSTLDPPVMEGVDGLLARSKA
VVKRIHPDDNGTAQVQAPSMYHWFGSKAAQKVQMPLTAVTSVIDGLKRLYVEKLKPLEVA
YRYNDFASPLLTNSDFDAKPMVMLLGQYSTGKTTFIKHLLKTSYPGAHVGPEPTTDRFVV
VMSGSDGRTIPGNTIAVQADMPFTGLTTFGGAFLSKFECSQMPHPLLEHITFVDTPGVLS
GEKQRTQRSYDFTGVTSWFAAKCDLILLLFDPHKLDISDEFKRVISSLRGHDDKIRVVLN
KADQVDTQQLMRVYGALMWSLGKVLNTPEVVRVYIGSFNDKPVNDSAVGPIGKDLFEREQ
DDLLCDLKDIPKKACDRRVNEFVKRARAAKIHAYIIGHLKKEMPAMMGKAKAQQRLIDNL
GEEFAKVQREYHLPAGDFPDVEHFKQVLGGYSIDKFEKLKPKMVQAVDDMLAHDIPELLK
NFRNPYE

Transcript Sequence

Transcript ID

OQU84412
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:4:3834744:3839043:-1 gene:SORBI_3004G047100 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

GAAAGCCGAAGCGAGTGCGAGTCGGCCCGTCAGGCTCCTCCTGTCTCATCTGTGCTGCTG
CAGTTGCTCCTGCTCCTCTCTGCGGCGGCGGCGGCGGCTGTCTAGCACCTGGGCGGGGCG
GCGAGAGGGGACGGAGATGGAGATCGCGCGAGCGGCTGCTGGCGTGGCCTGCTCCAAGGA
GCACCAGAGGATCTACGCCGAGTGGTTCGCCCTCGCAGACCCAGATGGCGATGGCCGCGT
CACGGGCGCCGATGCCACCAGCTTCTTCGGAATGTCCGCGCTCTCACGCGCCGATCTCAA
GCAGGTATGGGCGATCGCGGATTCCAAGCGGCAGGGGTACCTCGGATTCGCCGAGTTCGT
CACAGCAATGCAGCTCGTGTCTCTGGCCCAAGCAGGGAACGAGATCACAGAGGACAGTCT
GAAACGTGAAGACCTGAGCACCTTGGATCCGCCTGTGATGGAAGGTGTCGATGGACTACT
GGCTAGATCCAAGGCTGTTGTGAAGAGAATTCACCCAGATGACAATGGCACCGCTCAGGT
CCAAGCACCTTCCATGTATCACTGGTTTGGTTCAAAAGCAGCACAGAAGGTGCAGATGCC
TCTGACTGCTGTTACCTCTGTAATTGATGGCTTGAAAAGACTATATGTTGAAAAACTGAA
GCCATTGGAAGTCGCTTACAGATACAATGATTTTGCTTCCCCATTATTGACAAACAGTGA
TTTTGATGCAAAGCCAATGGTTATGCTCTTGGGTCAGTATTCAACAGGGAAAACAACATT
CATTAAGCATCTGCTGAAGACAAGCTACCCAGGAGCTCACGTCGGACCAGAGCCAACCAC
TGATAGATTCGTAGTTGTCATGTCAGGATCTGATGGAAGGACCATTCCAGGCAATACTAT
TGCTGTTCAAGCCGACATGCCATTCACTGGTCTTACAACATTTGGGGGAGCATTTCTGTC
AAAGTTTGAATGCTCTCAGATGCCACATCCGCTTCTAGAGCATATCACCTTTGTGGACAC
TCCTGGTGTCCTCTCTGGGGAAAAGCAACGGACGCAACGTAGCTATGATTTCACTGGTGT
AACCTCATGGTTTGCTGCTAAGTGTGACCTTATTCTTCTTCTGTTTGACCCTCACAAGCT
TGATATAAGTGATGAGTTCAAACGTGTCATTTCATCCTTACGTGGTCATGATGACAAAAT
ACGCGTAGTGTTGAACAAGGCTGACCAAGTGGACACACAGCAGCTTATGAGAGTATACGG
TGCATTGATGTGGTCTCTTGGGAAAGTGCTAAATACTCCTGAGGTTGTGCGTGTGTATAT
CGGGTCCTTCAACGATAAGCCAGTGAATGATTCAGCTGTTGGACCAATTGGAAAAGACTT
GTTTGAGAGGGAGCAAGATGACCTACTGTGTGACCTGAAAGACATTCCTAAGAAAGCTTG
TGATCGACGGGTCAATGAGTTTGTTAAGCGTGCTCGAGCTGCCAAGATCCATGCTTACAT
AATTGGCCATCTGAAGAAGGAGATGCCTGCAATGATGGGAAAAGCTAAGGCTCAGCAGCG
ACTCATAGACAACTTAGGGGAGGAGTTTGCCAAGGTGCAGAGGGAATACCATCTCCCCGC
CGGAGACTTCCCCGACGTGGAGCACTTCAAACAGGTGCTGGGTGGGTACAGCATCGACAA
GTTCGAGAAGCTGAAGCCCAAGATGGTGCAGGCGGTGGACGACATGCTTGCTCACGACAT
CCCGGAGCTCCTCAAGAACTTCAGGAACCCGTACGAGTGAACTGACCTGACCTGCCTCTC
GTCGGTTGTTTGTAAGATTTCCTTAGCTGTCACGCCTGGTGATGGCGGAGGGACGTCGGT
CCAGGGAGATGTAGACGGTCACGGGTCACTACTCACTAGCTGTCCGCAGCTGTGCCAAAA
ACCGAGAGGATGCATGAGGATTCAGATCAGAGAGCCACAGCGCGTTGCCTAGTTTCAGCG
TCAGTGCTCTGTCGTGGTTGCCGCACGCCGGCACGCGAAGGAGCAGCTGTAGTACCGTTA
CCGTCTCGCTGTGACACATTTTCCCCATCTTGATGAGATAAAGGCCCTGTTTG