Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

OQU84355
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:4:3225405:3227478:-1 gene:SORBI_3004G039100 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGTGGTATCTGCGATCTCGTCCGTTGATTGGTCGGTATCTGCGATCCGGACCGTTCATT
TGTGGTACAAGCAACCGACTTCTCCAAAGTCCAAACAAAGCCGAGTCGCATCCAATCGAT
CCCCAATCCGTTCAGGCCTCCCCGATCTCGCCGTCACCGCCCTCCACTCCGGCCGCCGCC
GCCGCCGCCGCTCTCCATCATAAACAATCCACCCCTCGTCGCCTCGCGTCCGTCTCCTGG
ACCAACGTACTCCCCCCTTCTCCTACTTGTAATTCCCCTCCTTCTGCTTGTGCGGCAGGG
GCCTCTTCCGCGCGGATGGGGAAGCACGAGTTCCTGACGCCGAAGGCGATCGCGAACCGG
ATCAAGGCAAAGGGGCTGCAGAAGCTGCGGTGGTACTGCCAGATGTGCCAGAAGCAGTGC
CGCGACGAGAACGGGTTCAAGTGCCACTGCATGTCGGAGTCGCACCAGCGGCAGATGCAG
GTGTTCGGCATGGCGCCCGACCGCGTCGTCGAGGGCTTCTCCGAGGAGTTCCTCGAGTCC
TTCCTCTCCCTCATCCGCCGCGCGCACCGCCACTCCCGCGTCGCCGCCACCGTCGTCTAC
AACGAGTACATCGCGGACCGTCACCACGTCCACATGAACTCCACGCGCTGGGCCACGCTC
ACCGAGTTCGTCAAGTTCCTTGGGCGCGAGGGGTACTGCAAGGTCGAGGACACGCCCAAG
GGGTGGTTCATGACCTACATCGACCGTGACTCAGAGAAGGCCGTCAAGGACCGCCTCAAG
CGCAAGAGGATCAAGTCAGACATGGCTGAGGACGAGCGCCAGGAGCGCATGATCGCCCGC
CAGATTGAGCGTGCACACAAGTCCTTAGCCAAACCCGATGATGGTGATGCTGCCGAGGGC
GAGCCTGAGTCCGGCAGTGAAGAAGAGTATTCAGGCTCAGACGATGATGGGGAGGAGCGT
GAGGATGGCTCAAAAGAGGCAAGCAAGGCAACAGGGAAGATTGCAATTGCGCTTCAGAAG
GCTGTGCCAGGGCCCAAGGTTAATCCTTTTGAGGATAAGCCGAAGGTGAAATTTGGTTTC
GACGAGGATGACACAGGTACCGGAGAGAAAAAGGATGAGGCGGCCAAGAACAAGGGAAAG
GATGTGAAGGCAACAGAGGCAAGGAGGTCAGCATTGGATGACCTGATGAAGGAGGAGGAG
AAGGCCAAGGAGAGGAGCAATAGGAAGGACTACTGGCTGTGCCCTGGGATTGTGGTCAAG
GTGATGAGCAAGACATTGGCAGAGAAGGGATACTACAAGCAGAAAGGGGTGGTGAAGAAA
GTTATCGATAAATATGTTGGGGAGATTGAGATGTTGGAGAGCAAGCATGTTCTCAGGGTT
GACCAAGATGAGCTTGAGACCGTGATCCCTCAGATTGGTGGACTGGTGCGGATTGTGAAT
GGGGCTTATCGGGGGTCAAATGCCAGGTTGCTCTCAGTGGACACTGCAAAATTCAGTGCA
AAAGTGCAGGTTGAGAAAGGCCTCTATGATGGGAAGGTTCTTAGGGCTGTCGAATACGAG
GACATTTGCAAGATATCCTCATGA

Peptide Sequence

PEP ID

OQU84355
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:4:3225405:3227478:-1 gene:SORBI_3004G039100 transcript:OQU84355 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MWYLRSRPLIGRYLRSGPFICGTSNRLLQSPNKAESHPIDPQSVQASPISPSPPSTPAAA
AAAALHHKQSTPRRLASVSWTNVLPPSPTCNSPPSACAAGASSARMGKHEFLTPKAIANR
IKAKGLQKLRWYCQMCQKQCRDENGFKCHCMSESHQRQMQVFGMAPDRVVEGFSEEFLES
FLSLIRRAHRHSRVAATVVYNEYIADRHHVHMNSTRWATLTEFVKFLGREGYCKVEDTPK
GWFMTYIDRDSEKAVKDRLKRKRIKSDMAEDERQERMIARQIERAHKSLAKPDDGDAAEG
EPESGSEEEYSGSDDDGEEREDGSKEASKATGKIAIALQKAVPGPKVNPFEDKPKVKFGF
DEDDTGTGEKKDEAAKNKGKDVKATEARRSALDDLMKEEEKAKERSNRKDYWLCPGIVVK
VMSKTLAEKGYYKQKGVVKKVIDKYVGEIEMLESKHVLRVDQDELETVIPQIGGLVRIVN
GAYRGSNARLLSVDTAKFSAKVQVEKGLYDGKVLRAVEYEDICKISS

Transcript Sequence

Transcript ID

OQU84355
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:4:3225405:3227478:-1 gene:SORBI_3004G039100 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

CTCCTCCATCTTGCGCCGCTCCTCCTGCGTGCGCGCGAGGTCCGCGTCGATCGAGTCCAT
GGCGGCGGCGGCGCGGGAGAGAGCGGGTAGGGTTTGCTTTGGTGGACGAGAGAGAAGATA
CGATGCGAGAATGGGGAAGGGGGCTAGCTAGTTGCTAGCGGGAGACGCCCTTCCCATGTG
GTATCTGCGATCTCGTCCGTTGATTGGTCGGTATCTGCGATCCGGACCGTTCATTTGTGG
TACAAGCAACCGACTTCTCCAAAGTCCAAACAAAGCCGAGTCGCATCCAATCGATCCCCA
ATCCGTTCAGGCCTCCCCGATCTCGCCGTCACCGCCCTCCACTCCGGCCGCCGCCGCCGC
CGCCGCTCTCCATCATAAACAATCCACCCCTCGTCGCCTCGCGTCCGTCTCCTGGACCAA
CGTACTCCCCCCTTCTCCTACTTGTAATTCCCCTCCTTCTGCTTGTGCGGCAGGGGCCTC
TTCCGCGCGGATGGGGAAGCACGAGTTCCTGACGCCGAAGGCGATCGCGAACCGGATCAA
GGCAAAGGGGCTGCAGAAGCTGCGGTGGTACTGCCAGATGTGCCAGAAGCAGTGCCGCGA
CGAGAACGGGTTCAAGTGCCACTGCATGTCGGAGTCGCACCAGCGGCAGATGCAGGTGTT
CGGCATGGCGCCCGACCGCGTCGTCGAGGGCTTCTCCGAGGAGTTCCTCGAGTCCTTCCT
CTCCCTCATCCGCCGCGCGCACCGCCACTCCCGCGTCGCCGCCACCGTCGTCTACAACGA
GTACATCGCGGACCGTCACCACGTCCACATGAACTCCACGCGCTGGGCCACGCTCACCGA
GTTCGTCAAGTTCCTTGGGCGCGAGGGGTACTGCAAGGTCGAGGACACGCCCAAGGGGTG
GTTCATGACCTACATCGACCGTGACTCAGAGAAGGCCGTCAAGGACCGCCTCAAGCGCAA
GAGGATCAAGTCAGACATGGCTGAGGACGAGCGCCAGGAGCGCATGATCGCCCGCCAGAT
TGAGCGTGCACACAAGTCCTTAGCCAAACCCGATGATGGTGATGCTGCCGAGGGCGAGCC
TGAGTCCGGCAGTGAAGAAGAGTATTCAGGCTCAGACGATGATGGGGAGGAGCGTGAGGA
TGGCTCAAAAGAGGCAAGCAAGGCAACAGGGAAGATTGCAATTGCGCTTCAGAAGGCTGT
GCCAGGGCCCAAGGTTAATCCTTTTGAGGATAAGCCGAAGGTGAAATTTGGTTTCGACGA
GGATGACACAGGTACCGGAGAGAAAAAGGATGAGGCGGCCAAGAACAAGGGAAAGGATGT
GAAGGCAACAGAGGCAAGGAGGTCAGCATTGGATGACCTGATGAAGGAGGAGGAGAAGGC
CAAGGAGAGGAGCAATAGGAAGGACTACTGGCTGTGCCCTGGGATTGTGGTCAAGGTGAT
GAGCAAGACATTGGCAGAGAAGGGATACTACAAGCAGAAAGGGGTGGTGAAGAAAGTTAT
CGATAAATATGTTGGGGAGATTGAGATGTTGGAGAGCAAGCATGTTCTCAGGGTTGACCA
AGATGAGCTTGAGACCGTGATCCCTCAGATTGGTGGACTGGTGCGGATTGTGAATGGGGC
TTATCGGGGGTCAAATGCCAGGTTGCTCTCAGTGGACACTGCAAAATTCAGTGCAAAAGT
GCAGGTTGAGAAAGGCCTCTATGATGGGAAGGTTCTTAGGGCTGTCGAATACGAGGACAT
TTGCAAGATATCCTCATGATATACAACGTGATTCATCCCATTTTCCTGGATCATCACTGA
AAGCAAACAAGCGCTATGCGATCCAGTGTACTAGCTGTGCCAATTAGATGTGTTTGTGCT
TGCTGTTGCTCGTGCATATCTTCTGTGGAAGCAGTTTTCAATATGCTGATGTTTCTGTTT
CACTGTAACTGCTGAAAGGCTATCTGTGAGAAAATGGTGTCTATGTTTGCTTTTTACTAG
ACCAGGATAACCGTATTGACAATTTTGTAATATTTGGTTAACTTCTATATTTCTGTTTCT
ATTTAATCTTTTACCAGCCGTTTTCTTGGTAGTT