Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

OQU84307
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:4:2456787:2460296:-1 gene:SORBI_3004G030700 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGACCCCGCGGGGCCGCGCGTGGGCACGGATCCCACCGGATCGGGAGCCGCGCCGCCG
CGCGAGGAATTGGACGGGAGAGGAAGAGGAGGAGCGTGCAGCGGCGCCGCAGCGGTGGAG
GGGAGCGCGTCGCGGCTGGCGGGCGCTGGATTAGGAGATCCGAGGGCTGGAATTCTGGAA
TCTTTGGTTCAAGCTGAAGCATATTTGCACACATATACCATGGATGTTCCTCAGTTGACT
GCTGAAGGTGCCACACAATGTGGAGATAGAGTGTCTTTATTGCCCCAGACTGGGGCACTT
CAGTCAGTAACTCCTTGTCTGACCTTGGGCCGCGATTCCAATGCAACATCAATGGAGAAG
TTGCATGGTAATGAGTCCTTGCCATTTGGTAAGGAGAACATCAGAAAAGATCTCCAACCT
AAACCTGATCCAGAACATGTTGATAATAGGATGAGTGTTGCACGTCTTGGGTTGGACCTT
AACACAGCAGATAGTTCTGATGCAGCAGAGCTTAACCCTTTCTTCCCTTACAAGAAGCTG
GGGCAGTTGAAAGTCAGTGGTCCATCAGAATGTGGCAGCACTACTGGTGCTACAGAAGAA
AGCGAGTCGCACAGAAAGTGGAGAGAAATGAAGCAGAATGGCTTTCTTTCTTCGTCTCAT
GGAAATGCAATGGTGCCTAGGCCACGTGGTCGACCCCCCAAAAGGAAAAGGGATGATGAA
TTCAAAAAGAGCACTTCTACACAGCATGGCCAGGCTAATAAGTCTATGAAGGTTGCTGCT
CCTAGTGGCCTATTATCTGGGCTAAACCCTGGAATCATTAACCATGTGAGAAATAGCAAG
CAGGTGTACTCCATAATAAAGGCTATGGTACACTCTGAGAGGCTTCAGAATGAGAACCAG
CCTGCCTTTACTAGTCAAACAGGTGAAAGAGGGAGAGATGTTAGTGAGAGAATTCAGGAT
CAGAAATATGGTAGTGGTTTCATGAAGTGCCATTCGTTGATGAAAGATAATAATGTGGTG
TTTCACCAAACACTGCCTACCACATTGCATTTCCTTCCACAGGATGGTGATAGTCTCAAA
CTGCAACTCTCATCAGCAGTCACTATGTCTTCAGATAGGACCTGCAGTACGTCGGCTGAT
GATCCAGCATCTAATCATGATTACATGACTGTACTGTCAGTAAAAGCGGCCAGTGTTGCT
TCTCAGTGGTTGGAATTACTGCACCAGGACATCAGGGGACGCCTTGCTGCTTTAAAACGC
AGCAGGAAGAGAGTCAGAAATGCTCTTCGCACGGAACTGCCATACCTAATGTCGACAGAA
TTTCCATCTAATCAAGAGAATGAATCATCGATTGCAAATACTTCTGAGGCTGGATGTACT
GAAAAAGCAGTTTCAGAAGCGCATGTGGCACGATGGAGGTCTCTGTTTGTCCAGATGGAC
AGAACACTTCAGGAGGAAGGGAAACAACTGGAGAACCGGTTGAAGCAAGTGCAAGAAATG
CAATTGAATTGTGATAAAGGCCTCAAACACATGACCTGTGAAGCTCCTCTGCTAGGACCC
ATGGCTGAACTATGGAAGCTGAACAACCCAGATAATTCTGAGAGTGAGTGGGCGGTGCAA
GCCGCTGCTGCATCAATCTACTCGACCTGCAACATGGTCATGAGAGCGGAGAACAACGTG
CCTTGCTTCTGA

Peptide Sequence

PEP ID

OQU84307
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:4:2456787:2460296:-1 gene:SORBI_3004G030700 transcript:OQU84307 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MDPAGPRVGTDPTGSGAAPPREELDGRGRGGACSGAAAVEGSASRLAGAGLGDPRAGILE
SLVQAEAYLHTYTMDVPQLTAEGATQCGDRVSLLPQTGALQSVTPCLTLGRDSNATSMEK
LHGNESLPFGKENIRKDLQPKPDPEHVDNRMSVARLGLDLNTADSSDAAELNPFFPYKKL
GQLKVSGPSECGSTTGATEESESHRKWREMKQNGFLSSSHGNAMVPRPRGRPPKRKRDDE
FKKSTSTQHGQANKSMKVAAPSGLLSGLNPGIINHVRNSKQVYSIIKAMVHSERLQNENQ
PAFTSQTGERGRDVSERIQDQKYGSGFMKCHSLMKDNNVVFHQTLPTTLHFLPQDGDSLK
LQLSSAVTMSSDRTCSTSADDPASNHDYMTVLSVKAASVASQWLELLHQDIRGRLAALKR
SRKRVRNALRTELPYLMSTEFPSNQENESSIANTSEAGCTEKAVSEAHVARWRSLFVQMD
RTLQEEGKQLENRLKQVQEMQLNCDKGLKHMTCEAPLLGPMAELWKLNNPDNSESEWAVQ
AAAASIYSTCNMVMRAENNVPCF

Transcript Sequence

Transcript ID

OQU84307
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:4:2456787:2460296:-1 gene:SORBI_3004G030700 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

AAAAAGAAATAAACCCGGCAGCCATAAATCCCCCACGCGATCCCCTCCCGTCCCAATCCC
CACTCCCCACCCCACGCATCTCCATTTCAAAACCGCGCAGGACCTTCGCGTCTCTTCCTC
CCTCCCTCCCCCGCTCTGCTCCGCTCCGCTCCTCTCCGCTCCAAAACCCTAGGCGGCGCC
CGCCCGGAGCCCGGATCCCGCGTCCCGCTCCCCCGGCGCCTCCGCCCGTCGCCTGCTCCC
CCGATGGACCCCGCGGGGCCGCGCGTGGGCACGGATCCCACCGGATCGGGAGCCGCGCCG
CCGCGCGAGGAATTGGACGGGAGAGGAAGAGGAGGAGCGTGCAGCGGCGCCGCAGCGGTG
GAGGGGAGCGCGTCGCGGCTGGCGGGCGCTGGATTAGGAGATCCGAGGGCTGGAATTCTG
GAATCTTTGGTTCAAGCTGAAGCATATTTGCACACATATACCATGGATGTTCCTCAGTTG
ACTGCTGAAGGTGCCACACAATGTGGAGATAGAGTGTCTTTATTGCCCCAGACTGGGGCA
CTTCAGTCAGTAACTCCTTGTCTGACCTTGGGCCGCGATTCCAATGCAACATCAATGGAG
AAGTTGCATGGTAATGAGTCCTTGCCATTTGGTAAGGAGAACATCAGAAAAGATCTCCAA
CCTAAACCTGATCCAGAACATGTTGATAATAGGATGAGTGTTGCACGTCTTGGGTTGGAC
CTTAACACAGCAGATAGTTCTGATGCAGCAGAGCTTAACCCTTTCTTCCCTTACAAGAAG
CTGGGGCAGTTGAAAGTCAGTGGTCCATCAGAATGTGGCAGCACTACTGGTGCTACAGAA
GAAAGCGAGTCGCACAGAAAGTGGAGAGAAATGAAGCAGAATGGCTTTCTTTCTTCGTCT
CATGGAAATGCAATGGTGCCTAGGCCACGTGGTCGACCCCCCAAAAGGAAAAGGGATGAT
GAATTCAAAAAGAGCACTTCTACACAGCATGGCCAGGCTAATAAGTCTATGAAGGTTGCT
GCTCCTAGTGGCCTATTATCTGGGCTAAACCCTGGAATCATTAACCATGTGAGAAATAGC
AAGCAGGTGTACTCCATAATAAAGGCTATGGTACACTCTGAGAGGCTTCAGAATGAGAAC
CAGCCTGCCTTTACTAGTCAAACAGGTGAAAGAGGGAGAGATGTTAGTGAGAGAATTCAG
GATCAGAAATATGGTAGTGGTTTCATGAAGTGCCATTCGTTGATGAAAGATAATAATGTG
GTGTTTCACCAAACACTGCCTACCACATTGCATTTCCTTCCACAGGATGGTGATAGTCTC
AAACTGCAACTCTCATCAGCAGTCACTATGTCTTCAGATAGGACCTGCAGTACGTCGGCT
GATGATCCAGCATCTAATCATGATTACATGACTGTACTGTCAGTAAAAGCGGCCAGTGTT
GCTTCTCAGTGGTTGGAATTACTGCACCAGGACATCAGGGGACGCCTTGCTGCTTTAAAA
CGCAGCAGGAAGAGAGTCAGAAATGCTCTTCGCACGGAACTGCCATACCTAATGTCGACA
GAATTTCCATCTAATCAAGAGAATGAATCATCGATTGCAAATACTTCTGAGGCTGGATGT
ACTGAAAAAGCAGTTTCAGAAGCGCATGTGGCACGATGGAGGTCTCTGTTTGTCCAGATG
GACAGAACACTTCAGGAGGAAGGGAAACAACTGGAGAACCGGTTGAAGCAAGTGCAAGAA
ATGCAATTGAATTGTGATAAAGGCCTCAAACACATGACCTGTGAAGCTCCTCTGCTAGGA
CCCATGGCTGAACTATGGAAGCTGAACAACCCAGATAATTCTGAGAGTGAGTGGGCGGTG
CAAGCCGCTGCTGCATCAATCTACTCGACCTGCAACATGGTCATGAGAGCGGAGAACAAC
GTGCCTTGCTTCTGATCTCACACTTATAGTTTAGTTTCTTGCTTTGCTGATTTTTACCTC
AAAATTAGGTTTCCTTTCTTACCTTTAGCCTTTGTGAATTGTGATCCCTTGTCCATTACA
GTAGTGGCGAGTGATGTAACAAGAAACTTGTGATGTATGTTGTCCCCCAGCCTACAATTT
CACAGGCACGTGAAATAACACATTCTTTTCATGGAGTTCAGAATCTTCAGATCCTACCGT
TTTGGTTCGGTTGTC