Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

OQU84102
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:5:71588908:71592412:1 gene:SORBI_3005G228600 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGTGGCGGCGGCAGCAGACCCTCCTCCGCCGGCTCCCGCCGCTGAGAGCGATGGCGCAG
GCTCCCTCGTCCTGGGCGGCCGACCGTCTGGGATGCTACTACGGGTCTGCGCCGGAGGGG
AGGAAGGGAAAGACGGCGCCTTTGCAGGCGCGGGGAATGGTGGACAAGTTCCGGATGCGT
GCCAAGGGTGGCGACGGCGGCAATGGCTGCGTCAGCCTCCGCCGCTCCAGGTCCAGCCGC
CTGGGCATGCCTGACGGTGGTAATGGAGGGAAGGGTGGTGATGTAATTCTTGAGTGCTCT
AGGTCTATCTGGGATTTCAGTGGCTTGCAGCATCACATGAGAGGAGGTCGAGGTGGCAAT
GGAGTTTCTAAGAATCAGATTGGAACAAGAGGTTCTGACAAGATTGCACAAGTACCCGTG
GGCACGGTGATTCATCTGGTGGAAGGGGAGCAACCTTCTCTCACAGTAAATAAACCAACC
AGATCCCTAGATCCCTGGGACATACCTGGTACTGCAGAACAGTCTTCTGATTCAGATCAG
ATTGATAATGCAGTGACGAAAGGTTTTGATGTTGGCTTTTCCCATCGGCATATTGACCCT
AAGCATAATACTGATGGAAATGAAGCTGTAAAGGGAAGCAACAGTCAGTTAGAGAATTCA
AAATACTTACATACATATACATACTCCAAGCCTCAGTTCTCAAGCACTGATTGTGATGTA
AGAATCTATTCATGTAAGGAGGGGACAGATGAAAAAGATCAGACTGAAAGTGAGGATGAA
GAATTTTGGGAGGATGAAGACGAGTTCGATATGGACAAGGAGGATGATGAGGAAGAGGAT
GCGAGGGAAGAACAAGATGTGCAATATTGTGTTGCTGAGATGACAAAACCTGGGCAGCGG
TTAATCGTAGCACGAGGAGGCGAAGGTGGACTGGGGAATGCTTTTATCATGAAGGAGATG
CGGCCATCCAAAGCAAACAAACAAGAGAAGATAGCCCGTTTGAGTACCGGGCAGCCAGGA
ACTGAGAGCTTCCTTATCTTGGAACTGAAGAGTATTGCAGATGTTGGTCTGGTTGGATTG
CCCAATGCTGGGAAGAGCACATTGCTCAGTGCTCTCTCTAGGGCGCAGCCAGAGATAGCT
GACTATGAATTCACCACGCTGAGGCCCAACATTGGCAGCCTGACCTACGAGGACTACTTC
TCAGTTAAAGTGGCTGATATACCTGGCCTGATCAAAGGAGCACATGAGAACCGTGGCCTG
GGTCATGCTTTCCTGAGGCACATAGAGCGCACCAAAGTTATCGCCTATGTGCTTGACCTT
GCAGCCACGCTTAATGGCAGGAAGGGTGTCCCACCTTGGGAACAGCTGCAGGATTTGGTC
TCAGAGTTGGAGCATTACCAAGAAGGAATGACTCGGCGACCGTCACTGATTGTCGCAAAC
AAGATAGACGAAGAGGGAGCTGAAGAGATGTATGAGGAACTGAAGAGGAGAGTGCAGGGT
ATTCCAATATTTCCAGTTTGCGCCATCTTGCAGGAGGGGGTGCCAGATCTGAGAGTGGGT
CTAAGGAACCTTATGGATGACTCAGATCCGCAGGGCATTAATTTTGAGAAAAATGACTGT
TGA

Peptide Sequence

PEP ID

OQU84102
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:5:71588908:71592412:1 gene:SORBI_3005G228600 transcript:OQU84102 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MWRRQQTLLRRLPPLRAMAQAPSSWAADRLGCYYGSAPEGRKGKTAPLQARGMVDKFRMR
AKGGDGGNGCVSLRRSRSSRLGMPDGGNGGKGGDVILECSRSIWDFSGLQHHMRGGRGGN
GVSKNQIGTRGSDKIAQVPVGTVIHLVEGEQPSLTVNKPTRSLDPWDIPGTAEQSSDSDQ
IDNAVTKGFDVGFSHRHIDPKHNTDGNEAVKGSNSQLENSKYLHTYTYSKPQFSSTDCDV
RIYSCKEGTDEKDQTESEDEEFWEDEDEFDMDKEDDEEEDAREEQDVQYCVAEMTKPGQR
LIVARGGEGGLGNAFIMKEMRPSKANKQEKIARLSTGQPGTESFLILELKSIADVGLVGL
PNAGKSTLLSALSRAQPEIADYEFTTLRPNIGSLTYEDYFSVKVADIPGLIKGAHENRGL
GHAFLRHIERTKVIAYVLDLAATLNGRKGVPPWEQLQDLVSELEHYQEGMTRRPSLIVAN
KIDEEGAEEMYEELKRRVQGIPIFPVCAILQEGVPDLRVGLRNLMDDSDPQGINFEKNDC

Transcript Sequence

Transcript ID

OQU84102
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:5:71588908:71592412:1 gene:SORBI_3005G228600 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

CCCCCACCCGCGAGGCCTGTCGCCGGGACACGGCGGCGCGCGAGGTCAAGAGTAAAAGTT
CTAGACCTCTTCTGCGCGAGTAGAGTGTAGTGGACATGTGGCGGCGGCAGCAGACCCTCC
TCCGCCGGCTCCCGCCGCTGAGAGCGATGGCGCAGGCTCCCTCGTCCTGGGCGGCCGACC
GTCTGGGATGCTACTACGGGTCTGCGCCGGAGGGGAGGAAGGGAAAGACGGCGCCTTTGC
AGGCGCGGGGAATGGTGGACAAGTTCCGGATGCGTGCCAAGGGTGGCGACGGCGGCAATG
GCTGCGTCAGCCTCCGCCGCTCCAGGTCCAGCCGCCTGGGCATGCCTGACGGTGGTAATG
GAGGGAAGGGTGGTGATGTAATTCTTGAGTGCTCTAGGTCTATCTGGGATTTCAGTGGCT
TGCAGCATCACATGAGAGGAGGTCGAGGTGGCAATGGAGTTTCTAAGAATCAGATTGGAA
CAAGAGGTTCTGACAAGATTGCACAAGTACCCGTGGGCACGGTGATTCATCTGGTGGAAG
GGGAGCAACCTTCTCTCACAGTAAATAAACCAACCAGATCCCTAGATCCCTGGGACATAC
CTGGTACTGCAGAACAGTCTTCTGATTCAGATCAGATTGATAATGCAGTGACGAAAGGTT
TTGATGTTGGCTTTTCCCATCGGCATATTGACCCTAAGCATAATACTGATGGAAATGAAG
CTGTAAAGGGAAGCAACAGTCAGTTAGAGAATTCAAAATACTTACATACATATACATACT
CCAAGCCTCAGTTCTCAAGCACTGATTGTGATGTAAGAATCTATTCATGTAAGGAGGGGA
CAGATGAAAAAGATCAGACTGAAAGTGAGGATGAAGAATTTTGGGAGGATGAAGACGAGT
TCGATATGGACAAGGAGGATGATGAGGAAGAGGATGCGAGGGAAGAACAAGATGTGCAAT
ATTGTGTTGCTGAGATGACAAAACCTGGGCAGCGGTTAATCGTAGCACGAGGAGGCGAAG
GTGGACTGGGGAATGCTTTTATCATGAAGGAGATGCGGCCATCCAAAGCAAACAAACAAG
AGAAGATAGCCCGTTTGAGTACCGGGCAGCCAGGAACTGAGAGCTTCCTTATCTTGGAAC
TGAAGAGTATTGCAGATGTTGGTCTGGTTGGATTGCCCAATGCTGGGAAGAGCACATTGC
TCAGTGCTCTCTCTAGGGCGCAGCCAGAGATAGCTGACTATGAATTCACCACGCTGAGGC
CCAACATTGGCAGCCTGACCTACGAGGACTACTTCTCAGTTAAAGTGGCTGATATACCTG
GCCTGATCAAAGGAGCACATGAGAACCGTGGCCTGGGTCATGCTTTCCTGAGGCACATAG
AGCGCACCAAAGTTATCGCCTATGTGCTTGACCTTGCAGCCACGCTTAATGGCAGGAAGG
GTGTCCCACCTTGGGAACAGCTGCAGGATTTGGTCTCAGAGTTGGAGCATTACCAAGAAG
GAATGACTCGGCGACCGTCACTGATTGTCGCAAACAAGATAGACGAAGAGGGAGCTGAAG
AGATGTATGAGGAACTGAAGAGGAGAGTGCAGGGTATTCCAATATTTCCAGTTTGCGCCA
TCTTGCAGGAGGGGGTGCCAGATCTGAGAGTGGGTCTAAGGAACCTTATGGATGACTCAG
ATCCGCAGGGCATTAATTTTGAGAAAAATGACTGTTGAATGAGGTTTCATCTTTTTCTCT
CATGACACTGACTCATATGAGTGTGTTGCGGATATTTCCCCTGAGAATCAGAGGAGCGAT
TTGATCTGCAAATGTTGATGACTCTGGCTATTCCTTTCTTCTTGTTGTGTTAATTACAAT
AATTGAGCATTTGCAATCTCTCTAGTACCCTTCTTGTTAAGGAGCAGAAATATGTAGTAG
CTATAAGGTTTGTTTCAAGTTGTACATGGTAGTAGCAGCTGAAACATTGGCCTTGGTCAG
TAAATAAACAGAACTGCATTTGCACTTGATAAAACCAATAAGTCAAGAATTAGGGCCTAT
TTTTCTTTAGTTAAGGGTGATGGATTCTGGTTCTGAATGCTGAAGATAAAATAAATGGGG
TACCTTTTAAAAGCAAATTGTGAGAATCCAATCCCATTTACATGACAATCCACAAGCTGC
ATCCAACCAGTTACAGCTAAACAGCCCACAATCTACAACTTGCTTTTAAGAATCCAATGC
TAAAATAAACATAGCACATGTCATGTTGGTATTATTCCTACTGAAGATATGCCCATGGAG
CTGTAATCTGCACAGTGAAGATGATCTTCTGGTCCAGATGATATATAGTACCAAAGAGTT
ACCTCTTATCAGTATTATATAATTTTCGCAGTCTGATTAACAGTATGGTTGCATGCTGTT
TGCTGCGGCTGGTTCT