Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

OQU84087
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:5:71393357:71397225:-1 gene:SORBI_3005G227000 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGTCTGCGCTGCAAGGTTGTTGATCTTGTGTATCGCCACATCTCTCCTTGCAGATGCA
GGAGCAGATGATCAGGTCAACTACGTTGTCGTGGAGACTAGCTCGCTTAAGCCAAGCGCC
GTTTGCAAAGGGCACAGGGTCCATCCATCCGTCAACAACTACAGCAGCAGCTGGACACCG
CTGAGTAATCCTCATGGTCCTTGCTCGCCGTCGTGGGAGGAGGGGGCGGCCATGGACTAC
AGTGCGTCGTCCATGGTCGACGACATGCTGCGATGGGATCAGCACCGCGCCGGCTACATC
CAAAGGAAGCTCTCCGGTAATGTTTCTCATGAAGATACAGAAATTTCAGACAGCACAACG
ACGCTCGAGAGCGTAAATGGCGGCGGCGCCGGAGATTTTAGCATGGGCGACGATGGAACC
GGCGGCATGGCAAAGGCACAGCAGCAGGACACCCATCATCAGGTGGTGGAAGAGCTGAGT
AGTGCTGCTGATCCGGCGGCGACCGGCGGCAGCCGACGCAGCCGCCTGCGGCCCGGTGTG
AGGCAGCTGATGCTTCTGGACACGGCGAGCGACGTGGCGTGGGTGCAGTGCTTCCCCTGC
CCCGCCTCGCAGTGTTACGCGCAGACGGACGTCCTGTACGACCCCTCCAAGTCGCGATCG
TCGGAGTCCTTCGCGTGCAGCTCCCCGACCTGCAGGCAGCTGGGGCCGTATGCCAACGGC
TGCAGCAGCAGCAGCAACTCTGCAGGCCAGTGCCAGTACCGCGTGCGGTACCCTGACGGC
TCCACGACGTCGGGCACGCTCGTCGCCGACCAGCTGAGCCTGAGCCCTACGTCTCAGGTC
CCAAAGTTCGAGTTCGGGTGCAGCCACGCCGCGCGGGGCAGCTTCAGCCGCAGCAAGACC
GCCGGGATAATGGCTCTCGGCCGCGGCGTGCAGTCGCTCGTGTCCCAGACCAGTACCAAG
TACGGCCAGGTCTTCTCCTACTGCTTCCCGCCGACGGCGAGCCACAAGGGCTTCTTCGTC
CTCGGCGTGCCCAGAAGGTCCTCCTCCAGGTACGCGGTGACGCCCATGCTCAAGACCCCG
ATGCTGTACCAGGTGCGCCTCGAGGCCATCGCCGTCGCGGGGCAGCGCCTCGACGTGCCG
CCCACGGTGTTCGCCGCCGGCGCGGCCCTCGACTCCCGCACCGTCATCACGCGCCTCCCG
CCCACGGCCTACCAGGCGCTGCGCTCCGCCTTCAGGGACAAGATGAGCATGTACCGCCCG
GCCGCCGCCAACGGCCAGCTCGACACCTGCTACGACTTCACCGGCGTCAGCAGCATCATG
CTTCCAACCATCAGCCTCGTCTTCGACCGTACCGGCGCCGGCGTCCAGCTCGACCCATCG
GGTGTCCTGTTCGGCAGCTGCCTCGCCTTCGCCTCCACTGCCGGCGACGACCGCGCCACT
GGGATCATCGGCTTCCTTCAGCTGCAGACCATCGAGGTGCTGTATAATGTCGCCGGCGGC
TCCGTTGGGTTCCGCCGTGGTGCATGCTGA

Peptide Sequence

PEP ID

OQU84087
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:5:71393357:71397225:-1 gene:SORBI_3005G227000 transcript:OQU84087 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MVCAARLLILCIATSLLADAGADDQVNYVVVETSSLKPSAVCKGHRVHPSVNNYSSSWTP
LSNPHGPCSPSWEEGAAMDYSASSMVDDMLRWDQHRAGYIQRKLSGNVSHEDTEISDSTT
TLESVNGGGAGDFSMGDDGTGGMAKAQQQDTHHQVVEELSSAADPAATGGSRRSRLRPGV
RQLMLLDTASDVAWVQCFPCPASQCYAQTDVLYDPSKSRSSESFACSSPTCRQLGPYANG
CSSSSNSAGQCQYRVRYPDGSTTSGTLVADQLSLSPTSQVPKFEFGCSHAARGSFSRSKT
AGIMALGRGVQSLVSQTSTKYGQVFSYCFPPTASHKGFFVLGVPRRSSSRYAVTPMLKTP
MLYQVRLEAIAVAGQRLDVPPTVFAAGAALDSRTVITRLPPTAYQALRSAFRDKMSMYRP
AAANGQLDTCYDFTGVSSIMLPTISLVFDRTGAGVQLDPSGVLFGSCLAFASTAGDDRAT
GIIGFLQLQTIEVLYNVAGGSVGFRRGAC

Transcript Sequence

Transcript ID

OQU84087
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:5:71393357:71397225:-1 gene:SORBI_3005G227000 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ACGGTTGTGTGGCAGTAGAATACAAGTCAGTAGCAATGGTCTGCGCTGCAAGGTTGTTGA
TCTTGTGTATCGCCACATCTCTCCTTGCAGATGCAGGAGCAGATGATCAGGTCAACTACG
TTGTCGTGGAGACTAGCTCGCTTAAGCCAAGCGCCGTTTGCAAAGGGCACAGGGTCCATC
CATCCGTCAACAACTACAGCAGCAGCTGGACACCGCTGAGTAATCCTCATGGTCCTTGCT
CGCCGTCGTGGGAGGAGGGGGCGGCCATGGACTACAGTGCGTCGTCCATGGTCGACGACA
TGCTGCGATGGGATCAGCACCGCGCCGGCTACATCCAAAGGAAGCTCTCCGGTAATGTTT
CTCATGAAGATACAGAAATTTCAGACAGCACAACGACGCTCGAGAGCGTAAATGGCGGCG
GCGCCGGAGATTTTAGCATGGGCGACGATGGAACCGGCGGCATGGCAAAGGCACAGCAGC
AGGACACCCATCATCAGGTGGTGGAAGAGCTGAGTAGTGCTGCTGATCCGGCGGCGACCG
GCGGCAGCCGACGCAGCCGCCTGCGGCCCGGTGTGAGGCAGCTGATGCTTCTGGACACGG
CGAGCGACGTGGCGTGGGTGCAGTGCTTCCCCTGCCCCGCCTCGCAGTGTTACGCGCAGA
CGGACGTCCTGTACGACCCCTCCAAGTCGCGATCGTCGGAGTCCTTCGCGTGCAGCTCCC
CGACCTGCAGGCAGCTGGGGCCGTATGCCAACGGCTGCAGCAGCAGCAGCAACTCTGCAG
GCCAGTGCCAGTACCGCGTGCGGTACCCTGACGGCTCCACGACGTCGGGCACGCTCGTCG
CCGACCAGCTGAGCCTGAGCCCTACGTCTCAGGTCCCAAAGTTCGAGTTCGGGTGCAGCC
ACGCCGCGCGGGGCAGCTTCAGCCGCAGCAAGACCGCCGGGATAATGGCTCTCGGCCGCG
GCGTGCAGTCGCTCGTGTCCCAGACCAGTACCAAGTACGGCCAGGTCTTCTCCTACTGCT
TCCCGCCGACGGCGAGCCACAAGGGCTTCTTCGTCCTCGGCGTGCCCAGAAGGTCCTCCT
CCAGGTACGCGGTGACGCCCATGCTCAAGACCCCGATGCTGTACCAGGTGCGCCTCGAGG
CCATCGCCGTCGCGGGGCAGCGCCTCGACGTGCCGCCCACGGTGTTCGCCGCCGGCGCGG
CCCTCGACTCCCGCACCGTCATCACGCGCCTCCCGCCCACGGCCTACCAGGCGCTGCGCT
CCGCCTTCAGGGACAAGATGAGCATGTACCGCCCGGCCGCCGCCAACGGCCAGCTCGACA
CCTGCTACGACTTCACCGGCGTCAGCAGCATCATGCTTCCAACCATCAGCCTCGTCTTCG
ACCGTACCGGCGCCGGCGTCCAGCTCGACCCATCGGGTGTCCTGTTCGGCAGCTGCCTCG
CCTTCGCCTCCACTGCCGGCGACGACCGCGCCACTGGGATCATCGGCTTCCTTCAGCTGC
AGACCATCGAGGTGCTGTATAATGTCGCCGGCGGCTCCGTTGGGTTCCGCCGTGGTGCAT
GCTGAGCGCTCAATAACCTACCATACCAACCTCCTAGCTGCCTACCTATAGCCAGCTACT
ACATGCCTATCGCTATTAAATTTTGCATGCATGACCTAAATAATTAATTACTATTTGTTG
TGTGAATGTGCATGTGTGCTACGTACTACTCTATATATATATACGCTGCATGCGGTTTTT
TTTTCTTTTTTGCCGAATATAATGGTTTGAAATGAAGCTTTATATGGATTGTGTTATACA
ATTTGTATACGCTTCGGTACGTACGGTGTGTATTCTTCTTCAAATGAATAAAAAGGATGG
ATCTGCTTGTCTGAATGCTTTTTTTTCTGTGACTACGTACCATGTTGAACTCTGTGTGGT
GTTTTTCTTCCGCAGGAAGTAACAGGCCACATTATATTTATGGGTATATATGTGGCTGAT
TTACCAATTAAATTAAACAAACCTACTAAGGCCTTGTTTAGTTCCGAAAATTTTTTGGTT
TTCGGAACTGTAGCAATTTCGTTTTTATTTGAAAAAAATTGTTCAATCATAGAGTAACTA
GACTTAAAAGATTCATCTCATAATTTACAGGTAAACTGTACAATTAGTTTTTATTTACAT
CTATATTTAGTGCTCCATGCATGTGTCGCAAAATTCGATGTGATGGGGAATCTTGAAAAG
TTTTTGGTTTTTGGGTGACTAAACAAGGCCTAAATTTCGGGGCCTATGTCGCACAGCCTC
CACAGCCCGAGGATGCCCGTGTGGCTATGTCCATATATATGCAAAGTAATAATAAAGGGA
CATTAAAATGATAATTTCTGAAATAATTTATTATTAGCAGATCTTTTAGTATTGCAATCA
GACGTTTTGAAATCAATAATCAACTCCCTCCGATCCACTTAAGCGAAAAATAAGACAAAA
CATAATTTCATGACATTTATTCCTAACCTAAGGCTATCCCTATTTCGAAGTTTCGTTGTG
CGGTTTCCAATAGTGTCACGTCATCTAAATATATTTAGGATGATCAATAGCTCCAAACAT
GCACAACTTCATTCCACAGTCTCAATAGGGGTGAATCTAGCCAGATTAAGCACCGAGGTC
AACATCAAGGGAGCTACTAATATGGTGTTTCACTACAACACAAAAGATTAACCACGACCT
TCTAAAAACAGGCACGGAGGCAGGACAGGATTTTCAAACTGCCTTGGTTAATAGCCTGGA
TTAATTGAGGCGGTCACTTTTTATTAACTGAGATCCACTAACCGAGATGGAGAATGTAAC
ATAACTGCCTTGGTTAATATCTATTAACCGATATGGTTATTTTATAAGGCCTGCCTCCTA
AAATCTGAAATAGCCTGCTATTGTATCATCAGTCCCTGCAAAAGCCCAACGCCCCTCCCA
CATCGCAGGCTTATATAAATATCACAATTAGGGTTTCCACTCTCACCCTCTCTCTCATTC
TTCCGACCCGAGCGTCGCATGTTGACGGTTCTTAAGTATCAATTTTAATTATCAAATAAA
TAAGAGAAAGGACCAATATGCAACCAACACCTAGAATTAGTGTTTGATCTGACAGAATTC
CACGAGTTTTGTTGTTTATCTGTTTCTGCAGGGGGTTATCAGGAAATAAGGAAGAAAGGC
CCACATGTCAGAATTACATAGAGATATCAACGCACCGCGCAATTTTCTACCATCTAGAAG
ACTCCAGAAGCCACGGGAAGAAAGCAGAGGCCGAAAGGGGCCAGGCCCAGGGCGCCCGCC
CCCCTCTGGATGCCAATCAGGACTCTCTTTGCACACGACGTTCCACCGACCTAAAAGATC
AAAGATAACGTAGTACCACATCGCCTGCTGGACCAAAAATGCACAGAGGAGGAGAGCTAT
ATAAGCAGACCCCTTGGCCCCTGGAGGAGACAAGAAGTTATCATAGAGATTGAGGGGTGC
CCTCGAAGGAAAACCTCTTCTCTAAACAAAATTTCTTTTTAGGCTTAGCAACCAATGTAA
AGTAGAAATAGATCTTCTAGTTTCTACAAGATTGAGAGAGATAGAGTGGAGGTGTAGATC
GGAGGAAGCCCGGCCTGTCGGTGTCTACTCTGAGCTTGTACCTGCGGGATCAAG