Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Sorghum bicolor

CDS Sequence

CDS ID	OQU84001
CDS Infomation	cds chromosome:Sorghum_bicolor_NCBIv3:5:69850821:69854611:-1 gene:SORBI_3005G212400 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence	ATGATGGGGGCGCCTCCGGCCGTTCCACGCGGCAGGCTCCGGCGGAACCAGCTTGTTACC GCCGGCCAGCTGATAAAGAAGCTGTTCACCGGCGGTGGCGGGTCCAACGACGCCTACGAT CTGATGATGGAGGTGATGAAGCTGGTCCGGGGACTCTCCGACAGCGACAACCCGGAGAAC GTGGTGGAGGGCGCAGGCTACCTCAGGGAAGCTATGCAGGAGGTGGACAAGCAGGAAGTG AAGGTGATGGCGAGCTGGCTGCTGGACATGCTGCTGGGCCGTGCTGACATGCCTCAGGAG AAAGACAAGGATAGAGCTGGTGTTGGACAGGAGCTGTTAGCGGATGTGGTCAGGGCAGTG CATGCTCCAATCGAGAAGTTCTTAGAGCACACCGAAGCATTGGCAAACCTTTCATTTTCA TGGAGTGATCCGATCAAGCCTATAAATGACTTGAGGGATGCTATACATGACCTGATGGAT GTGTTCATCGCGCTGAGAGGGCCAATACTGAGGTTCTTAGGCATTTCCAAGCAGGAGGAG AAAGAGAAGGAGAAGGATGGCGATGGCTCGTCGTCGTCGGCTCGATCTCGACGACATGGC AGCGCAGGTCTAGCTGCAAATGAGAACCTGCTGGAGATGATGAAGAATGCAAAAGAGCCG ATGGAGGTGGCCAGGGCTGAGGCGAGGTACGTCGTGGCACGCTTCTTCTGGCTGTGCCAC GTGTTGTACCTCTCGAAGAGACAAGATAAGCCGGTACCCAAAGTCATCGCCATTGTAACA CCGCCTGTTGAGGAAACGAGCGGTGGTGACGATGGGCCAGAGGAGGTACCTGAAGACACT CATGCCACAGAGCTCGCAAGGAAGGTCTACAACCATCCAAGCGCGAGCAACTATTTCAGC ACCAAGGTGTGGGTGGACGCCAAGCAAAACCCGGATCTCAAGGACATGCTCTTGTCCATT CTCCACCAAGTGCAGCCTCAGCAGCAGCAGCAGCAACAACAGCAAGACAAGCAGCAGCAG CAGCAGCAAGACAAGCAGCAAGACAAGCAGCAGCAGCAACAGCAAGACAAGCAGCAGCAG CAGCAGAAGCAAGACAAGCAGCAGCAGAAGCAGCAGCAAGACAAGCAGCAGCAGCAGCAG CAGAAACAAGACAAGCAGAAGCAGAAGCAGCAGCAAGACAAGCAGCAGCAGCAAGACAAG AAGCAGCAGCAGAAGCAAGACAAGCAGCAGCAGCAGCAATCAGATTCGGGTTCAGGTGCC AATCCCGGCGCCGATCTTTCCGGCAGCGGTGATCATCAAGATGTGAAGCCGACGACGGAC TGGAGCGAGGAGAAGCTGAAGGCCGAGATCGCAAATTGTCTCAAGGGCAAAAGGTTCTTG ATCGTGCTCGCCGATGCCGAGGACGACAACTCATGGCAGGACATAACCTCTGGGCTGCCG GACCACGGCGACAGTGCCGTCATTATAACCCCAAGGATAAGGTACCTGGCCCAGTTTCAT GGGTGGTACACGGCTAGCTGGTTCTTCCTGGTCACAGGTGCCTCCTCCCGGTACAATGTA CACTTCTGCTCCAACCTTGTTGGCATTGGCAAGCTGGCCGCTCAGCTGGTCGGCAGTGAC CAGCTTCCGGCCGATATCAGTGCAATCCTCAAGAAATGCCTCTGGGACTCCTTCGCCACC AAGATGTTCCTCCATGCCCTGTATGTCAACCCCAATCGAAGTGATGGCGAACTGGAGAGG TTGATGTTTGGCCTGAGGTATGCTAGCAGTGTGAGCAATGCCAGGCGCATGGTACAGTTC TGCTACGATGACCTGCCAAGGCAGTTCCAGAGCTGCCTCCTGAACCTATCCATTTTTCCT CGAGAAGACGAAGAAGGCAAAGGCGAGAGGATAATGAAGCTCAAGAGGACAAGCCTAGTC CGGCGGTGGGCGGCTGAAAACTTCGTCAGTGGCAGAGATGGGCTGGCTGCCGTGGATGAA GCCGACCGCTGCTTCGACGCGCTCGTCGCTCGAGGCCTCCTTGATCCTGCCGACATTGGG CCGGCGGGCAAAGTCAAGACCTGCACCCTGGATCCCCGTGTCCTCTCCTTCATCACCAAG ATGGCCAGCAGCGATGCTATCATCACCGACGGCAGGGATCTCCCACCCAACATGGCTCAC CACCTTTCCACCAGCAGTGTAGTCCTGCAACGACTGATGGAGGACCAGTCTGCTGCCAAT TCCAACACCTGCTTCGGCATGATCCATGGCCGCCGCCGACGCCGACACACTACTAGTCGC CCGTCGGCCGCTGACGCCGGAGACGATGCAGTGGTAACTTTCCTCACCTCGTTGCCGGCA TCTTCCGATCAGCTGGGGTTGGTCAAGTTGCTCGACCTAGAAGGCTGCAAAGGACTGACG AAGCGGCGCCTCAAGAAGATCTGCAACAAGATTTTCCAGCTCAAGTACCTCAGCCTAAGG AACACGGATGCAGCCGAGCTGCCCAAGGAAATCAACAGGCTCCGGTACCTGGAGACACTT GACATCAGGGAAACCGCTATAAGGTCATTCCCTGCAAACACCATCGCCCTCCCGAAGCTG ATGCATCTCCTTGCTGGCCGCATTGGAGCTACAGGTCATGAGAAGAGTTCGTCTGAAGGC ATCAGATCATCGGACAAGCAATTTTCCGCAGTGCAGCTGCCTACCGGTATCGGTAGCATG ACAAACATGCAGGTGCTGTCCCATGTTGAGGTCTCAAAGGATGACGAGGATGAGTTCAGA AATGTTGGCCGGAAGCTGCAGTTGAGGAAGCTGGGTGTGGTTGTCCGCGGCGAGCAACCT ATCTTAGCTTTGCTTCGGGTTGTCGGGATGCTGCATGAAAGCCTATGCTCACTGTCGGTC CATCTTCATCCGGCAGAGCGTAGTGAGGGTGATGCTCGGGGAAAAGCTGAAGTAGCGAAT GATGGTGGTGGTCATGCTTTCACCATCAACACAACCGAGATACCCAAATCTCTGGAAAGC CTCAACATCAACGGCAAGATAAGTGAGCTGCCCACTTGGGTTAGACAGCTTCATCGACTT ACCAAGATAACCCTGTGCCGTACCAGCTTGAGAGGAGAAGATGTACACAGGCTGGGTGAG CTTGCCAACTTGCGCTGCATCAGGCTCTTGCATCAGTCATATGCCGAACAGAAGCTCACT TTCAGCACGAGAGAATTCAGGAAATTGGAGCTCCTTGTCATCGAGGACTTGGGAATATCT GACGTGAACTTTGCTGAGAATGCAGCTCCCAATCTCAAGAAGATAGACTGGAGTTTCACC AGAAAGGACATTACTCTGTCTGGAATCAAAAAGTTATCCAACCTAAAGGAGGTTCATCTC AATGGCCACTGTGATGACAACACCCTGAGTAAGATTAAACAGGACCTCAATGAGAATTCA AACCTCCCAAAACTTTCTGTCAGATCTATGAGCTAG

Peptide Sequence

PEP ID	OQU84001
PEP Infomation	pep chromosome:Sorghum_bicolor_NCBIv3:5:69850821:69854611:-1 gene:SORBI_3005G212400 transcript:OQU84001 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence	MMGAPPAVPRGRLRRNQLVTAGQLIKKLFTGGGGSNDAYDLMMEVMKLVRGLSDSDNPEN VVEGAGYLREAMQEVDKQEVKVMASWLLDMLLGRADMPQEKDKDRAGVGQELLADVVRAV HAPIEKFLEHTEALANLSFSWSDPIKPINDLRDAIHDLMDVFIALRGPILRFLGISKQEE KEKEKDGDGSSSSARSRRHGSAGLAANENLLEMMKNAKEPMEVARAEARYVVARFFWLCH VLYLSKRQDKPVPKVIAIVTPPVEETSGGDDGPEEVPEDTHATELARKVYNHPSASNYFS TKVWVDAKQNPDLKDMLLSILHQVQPQQQQQQQQQDKQQQQQQDKQQDKQQQQQQDKQQQ QQKQDKQQQKQQQDKQQQQQQKQDKQKQKQQQDKQQQQDKKQQQKQDKQQQQQSDSGSGA NPGADLSGSGDHQDVKPTTDWSEEKLKAEIANCLKGKRFLIVLADAEDDNSWQDITSGLP DHGDSAVIITPRIRYLAQFHGWYTASWFFLVTGASSRYNVHFCSNLVGIGKLAAQLVGSD QLPADISAILKKCLWDSFATKMFLHALYVNPNRSDGELERLMFGLRYASSVSNARRMVQF CYDDLPRQFQSCLLNLSIFPREDEEGKGERIMKLKRTSLVRRWAAENFVSGRDGLAAVDE ADRCFDALVARGLLDPADIGPAGKVKTCTLDPRVLSFITKMASSDAIITDGRDLPPNMAH HLSTSSVVLQRLMEDQSAANSNTCFGMIHGRRRRRHTTSRPSAADAGDDAVVTFLTSLPA SSDQLGLVKLLDLEGCKGLTKRRLKKICNKIFQLKYLSLRNTDAAELPKEINRLRYLETL DIRETAIRSFPANTIALPKLMHLLAGRIGATGHEKSSSEGIRSSDKQFSAVQLPTGIGSM TNMQVLSHVEVSKDDEDEFRNVGRKLQLRKLGVVVRGEQPILALLRVVGMLHESLCSLSV HLHPAERSEGDARGKAEVANDGGGHAFTINTTEIPKSLESLNINGKISELPTWVRQLHRL TKITLCRTSLRGEDVHRLGELANLRCIRLLHQSYAEQKLTFSTREFRKLELLVIEDLGIS DVNFAENAAPNLKKIDWSFTRKDITLSGIKKLSNLKEVHLNGHCDDNTLSKIKQDLNENS NLPKLSVRSMS

Transcript Sequence

Transcript ID	OQU84001
Transcript Infomation	cdna chromosome:Sorghum_bicolor_NCBIv3:5:69850821:69854611:-1 gene:SORBI_3005G212400 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence	TGGATGATGGGGGCGCCTCCGGCCGTTCCACGCGGCAGGCTCCGGCGGAACCAGCTTGTT ACCGCCGGCCAGCTGATAAAGAAGCTGTTCACCGGCGGTGGCGGGTCCAACGACGCCTAC GATCTGATGATGGAGGTGATGAAGCTGGTCCGGGGACTCTCCGACAGCGACAACCCGGAG AACGTGGTGGAGGGCGCAGGCTACCTCAGGGAAGCTATGCAGGAGGTGGACAAGCAGGAA GTGAAGGTGATGGCGAGCTGGCTGCTGGACATGCTGCTGGGCCGTGCTGACATGCCTCAG GAGAAAGACAAGGATAGAGCTGGTGTTGGACAGGAGCTGTTAGCGGATGTGGTCAGGGCA GTGCATGCTCCAATCGAGAAGTTCTTAGAGCACACCGAAGCATTGGCAAACCTTTCATTT TCATGGAGTGATCCGATCAAGCCTATAAATGACTTGAGGGATGCTATACATGACCTGATG GATGTGTTCATCGCGCTGAGAGGGCCAATACTGAGGTTCTTAGGCATTTCCAAGCAGGAG GAGAAAGAGAAGGAGAAGGATGGCGATGGCTCGTCGTCGTCGGCTCGATCTCGACGACAT GGCAGCGCAGGTCTAGCTGCAAATGAGAACCTGCTGGAGATGATGAAGAATGCAAAAGAG CCGATGGAGGTGGCCAGGGCTGAGGCGAGGTACGTCGTGGCACGCTTCTTCTGGCTGTGC CACGTGTTGTACCTCTCGAAGAGACAAGATAAGCCGGTACCCAAAGTCATCGCCATTGTA ACACCGCCTGTTGAGGAAACGAGCGGTGGTGACGATGGGCCAGAGGAGGTACCTGAAGAC ACTCATGCCACAGAGCTCGCAAGGAAGGTCTACAACCATCCAAGCGCGAGCAACTATTTC AGCACCAAGGTGTGGGTGGACGCCAAGCAAAACCCGGATCTCAAGGACATGCTCTTGTCC ATTCTCCACCAAGTGCAGCCTCAGCAGCAGCAGCAGCAACAACAGCAAGACAAGCAGCAG CAGCAGCAGCAAGACAAGCAGCAAGACAAGCAGCAGCAGCAACAGCAAGACAAGCAGCAG CAGCAGCAGAAGCAAGACAAGCAGCAGCAGAAGCAGCAGCAAGACAAGCAGCAGCAGCAG CAGCAGAAACAAGACAAGCAGAAGCAGAAGCAGCAGCAAGACAAGCAGCAGCAGCAAGAC AAGAAGCAGCAGCAGAAGCAAGACAAGCAGCAGCAGCAGCAATCAGATTCGGGTTCAGGT GCCAATCCCGGCGCCGATCTTTCCGGCAGCGGTGATCATCAAGATGTGAAGCCGACGACG GACTGGAGCGAGGAGAAGCTGAAGGCCGAGATCGCAAATTGTCTCAAGGGCAAAAGGTTC TTGATCGTGCTCGCCGATGCCGAGGACGACAACTCATGGCAGGACATAACCTCTGGGCTG CCGGACCACGGCGACAGTGCCGTCATTATAACCCCAAGGATAAGGTACCTGGCCCAGTTT CATGGGTGGTACACGGCTAGCTGGTTCTTCCTGGTCACAGGTGCCTCCTCCCGGTACAAT GTACACTTCTGCTCCAACCTTGTTGGCATTGGCAAGCTGGCCGCTCAGCTGGTCGGCAGT GACCAGCTTCCGGCCGATATCAGTGCAATCCTCAAGAAATGCCTCTGGGACTCCTTCGCC ACCAAGATGTTCCTCCATGCCCTGTATGTCAACCCCAATCGAAGTGATGGCGAACTGGAG AGGTTGATGTTTGGCCTGAGGTATGCTAGCAGTGTGAGCAATGCCAGGCGCATGGTACAG TTCTGCTACGATGACCTGCCAAGGCAGTTCCAGAGCTGCCTCCTGAACCTATCCATTTTT CCTCGAGAAGACGAAGAAGGCAAAGGCGAGAGGATAATGAAGCTCAAGAGGACAAGCCTA GTCCGGCGGTGGGCGGCTGAAAACTTCGTCAGTGGCAGAGATGGGCTGGCTGCCGTGGAT GAAGCCGACCGCTGCTTCGACGCGCTCGTCGCTCGAGGCCTCCTTGATCCTGCCGACATT GGGCCGGCGGGCAAAGTCAAGACCTGCACCCTGGATCCCCGTGTCCTCTCCTTCATCACC AAGATGGCCAGCAGCGATGCTATCATCACCGACGGCAGGGATCTCCCACCCAACATGGCT CACCACCTTTCCACCAGCAGTGTAGTCCTGCAACGACTGATGGAGGACCAGTCTGCTGCC AATTCCAACACCTGCTTCGGCATGATCCATGGCCGCCGCCGACGCCGACACACTACTAGT CGCCCGTCGGCCGCTGACGCCGGAGACGATGCAGTGGTAACTTTCCTCACCTCGTTGCCG GCATCTTCCGATCAGCTGGGGTTGGTCAAGTTGCTCGACCTAGAAGGCTGCAAAGGACTG ACGAAGCGGCGCCTCAAGAAGATCTGCAACAAGATTTTCCAGCTCAAGTACCTCAGCCTA AGGAACACGGATGCAGCCGAGCTGCCCAAGGAAATCAACAGGCTCCGGTACCTGGAGACA CTTGACATCAGGGAAACCGCTATAAGGTCATTCCCTGCAAACACCATCGCCCTCCCGAAG CTGATGCATCTCCTTGCTGGCCGCATTGGAGCTACAGGTCATGAGAAGAGTTCGTCTGAA GGCATCAGATCATCGGACAAGCAATTTTCCGCAGTGCAGCTGCCTACCGGTATCGGTAGC ATGACAAACATGCAGGTGCTGTCCCATGTTGAGGTCTCAAAGGATGACGAGGATGAGTTC AGAAATGTTGGCCGGAAGCTGCAGTTGAGGAAGCTGGGTGTGGTTGTCCGCGGCGAGCAA CCTATCTTAGCTTTGCTTCGGGTTGTCGGGATGCTGCATGAAAGCCTATGCTCACTGTCG GTCCATCTTCATCCGGCAGAGCGTAGTGAGGGTGATGCTCGGGGAAAAGCTGAAGTAGCG AATGATGGTGGTGGTCATGCTTTCACCATCAACACAACCGAGATACCCAAATCTCTGGAA AGCCTCAACATCAACGGCAAGATAAGTGAGCTGCCCACTTGGGTTAGACAGCTTCATCGA CTTACCAAGATAACCCTGTGCCGTACCAGCTTGAGAGGAGAAGATGTACACAGGCTGGGT GAGCTTGCCAACTTGCGCTGCATCAGGCTCTTGCATCAGTCATATGCCGAACAGAAGCTC ACTTTCAGCACGAGAGAATTCAGGAAATTGGAGCTCCTTGTCATCGAGGACTTGGGAATA TCTGACGTGAACTTTGCTGAGAATGCAGCTCCCAATCTCAAGAAGATAGACTGGAGTTTC ACCAGAAAGGACATTACTCTGTCTGGAATCAAAAAGTTATCCAACCTAAAGGAGGTTCAT CTCAATGGCCACTGTGATGACAACACCCTGAGTAAGATTAAACAGGACCTCAATGAGAAT TCAAACCTCCCAAAACTTTCTGTCAGATCTATGAGCTAGCTACCTTGCTAGGCCAACGCT GATGTTGCTACTACCGCTGCTGCCGCCACCGCTGCTTCGGCTGCAGGTACTGCAGTTCAA CCAATACCTATATCCTGACGCTCCGAAGGAGAGACTATTTATATATGTACATTTGCTAAT TCGCTTTGTGCTTGTGGACTTACTGCTCTGAAGATTTATCCATGTGTGTGCGTGAGTGGT TACTTGTGTGTGTGTGTGTGCGCGCACCAGTTGTTCTGAGTGCGTACTGTGTAGTGACTT TGTGTTGTTCATGGTTATGTACTTATGTCTAGTGCTCAGGAGAATTTGGATGTGCGGGAC TAATAAAAAAT