Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

OQU83578
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:5:59167397:59172896:1 gene:SORBI_3005G138000 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGTGTGAAGAAGTTGATCAGAATCCACAATCACCGCCTGCTGTTATGAGTGATCCTAAA
CCAAGCAATCCTTGTGCGTTCAGCATTCCAAGGACTCCTGTGGATGATGCTAGAATGCAA
ATTAATAATGTTAGTCCCCAAGGTGCTGGTGCTACAACTCCAGTTAATGTCAGTCCCCAG
GCTGCTGTTGCTAGAACTCCATTTAATTACACGAAAGGTGTTGGCACTACGACTCCAGTT
AATGTCAGTCCCCAGGCTGCTGTTGCTACAACTCCATTTAAGTACACTTCGAAAGGTGTT
GGCGCTCTGACTCCAGTTCATGTTAGTCCACAAGGTGCAGGCGCTATGACTAAAGTTAAT
GTCAGTCCTCAGGCTGCTTGTGCTACAACTCCATTTAATTACACTTCGAAAGGTGTTGGC
GCTATGACTCCAGTTCATGTTAGTCCACTAGGTGCAGGCGCTATGACTCCAGTTCATGTT
AGTCCACAAGGTGCAGGCACTGCAGCAGCAGTTAAAGCTAGTCCCCGATGGCATGGATCT
AAAGATGGACAGCTAATCTGCCAGTGTACAGCAGGGAAGTGCAAAAAAATGAGAGTGGAC
AACGAAGACTGCTATGTTTGTCCTATACCCAAGGGACAAGGTGCATGCAATTTCAAGGTG
CCAGTAACAGCTGTTAAAGGACCACCACAGATCGGAGACTACAATGTAATGGAAGCCCAT
GGGAACACTGCAGTTGGAATAGGAGACAACAATGCGAATGGATCAGCCAATCCTGCTCAA
CCTAATGACGATGAGTGGCCATTTGAAATCATCAACAATGAAATCGTGCCGACAGGTCAA
GCAACGGTCCGTGCTGTAGTCCACCAGAACTCACCAGGCACGCCGCGCCAGCCGATTGCC
ATGGCGAGAACACCCGCGACATCACCCATGACGCCTTTTGGTAGCCGCCCCAGCCCCATG
ACCCGGCGTCCAAACAACACCTGCTTCGAATGTGGTGAGGAAGGGCACTGGAGGAATTCC
TGCCCTAAACGATCTTCCCAAAATAATGGCTGTTTCCATTGCGGCATGGCCGGTCACTGG
CAGGCCAGTTGTCCCAAGCGAAGAGGGTCTTAG

Peptide Sequence

PEP ID

OQU83578
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:5:59167397:59172896:1 gene:SORBI_3005G138000 transcript:OQU83578 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MCEEVDQNPQSPPAVMSDPKPSNPCAFSIPRTPVDDARMQINNVSPQGAGATTPVNVSPQ
AAVARTPFNYTKGVGTTTPVNVSPQAAVATTPFKYTSKGVGALTPVHVSPQGAGAMTKVN
VSPQAACATTPFNYTSKGVGAMTPVHVSPLGAGAMTPVHVSPQGAGTAAAVKASPRWHGS
KDGQLICQCTAGKCKKMRVDNEDCYVCPIPKGQGACNFKVPVTAVKGPPQIGDYNVMEAH
GNTAVGIGDNNANGSANPAQPNDDEWPFEIINNEIVPTGQATVRAVVHQNSPGTPRQPIA
MARTPATSPMTPFGSRPSPMTRRPNNTCFECGEEGHWRNSCPKRSSQNNGCFHCGMAGHW
QASCPKRRGS

Transcript Sequence

Transcript ID

OQU83578
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:5:59167397:59172896:1 gene:SORBI_3005G138000 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

TGCATGACTGCATGAGTATGGCCCCCAGGAAGTGGTTGCTACAGCGACCAACGAAGACAC
CCTCGTGCTGTCTGTTAGCGGAATGTGGAAACGCTAGGCAGTGCGCTCCCATGCCTTCTC
CCCGCTGCATGGCTGCTGGTCTGCATCGCAAAGAGGAGAGTGGAGGGCTTTTGATGGAGA
ACGATAAGGAGGGGAGTGCCTCTCTTACCGTCGCCGAAAACTTTGAGTTCGCCACCTGCA
TGGCAAACAGCATGCCCACCGCCCGTGGGGGCAACTGCTGGCCCAAGATCCCCGACACAG
TGGACAAGATCAAGGTCCTCCGCGCGGTGAAGAGCAACTTGGAGGAGCTGCGAAGAGGTG
CAGGGCTGAATCAGCTGCAGATCGTGCATCACCCGCACCCGCCGACACGCTAGGAGGCCG
CGCAGCAGCAGCCTGCAGCCGCACCATCGCCGACTCCTGGTGGGTAAGCATCTTCCCCGT
CGGCTGCTCAAACTGCTGTGACTTCTCGCCCGTGTCTTGGATCTGCCAGACGCCGACGCC
AACGCCCCTATAGAAGATCCCATCATTGAATGGGTGCTGGAGGTTCAGCCCACCATGAAG
GACAATGGCGCCGGTGGACTCTGGGGCAACCGTCGTCGTGGCTGTCGGGGCGCTCACCAT
CGTGTACACCGGCCCTATCGTCAATGCCAGAGCATAAGACGGAACCAGAGAAGGAGAATG
CGACATCTGCAGCTGGTGGATGGGAACTGGGGCGGCCGTCTACACGCCCTGGAACAAAAA
CGTCGTCGTCCCGTATCCGTGCATCCCGTAGGGGAAAACCGGTGGCAGAGAGGCCACTGC
CGATTGTGGTAGTGGCCAGCTGGCCGGTTGCAGCGGTGGTATGCCGAGGTAGGACTGGAT
GTCGGCGATGGAACGGGCGAGATCAGTGATGGCCGCAGTCAACTGATTTGGTGTCATCGG
TGAGGAGTGACCGGCAGCAGCTCATCGTAACTTGACATCATTGTTATGTTGGCAGCTAGG
ATTGAGAGGGGTGAGATGGGGAAGCAGCGGCTGCTAGGCTGCTACAGTACCCGCGGGTAC
TGTTCACACCGGATGTTGTGGCGGTGGTTAGGGCTACGAGGGTGAGAGGAGGCCGGCCGG
GGGCTTTGCCCATGGCCGGGCAAGAGGGAAGGGTTTTCCTTGTTAATTCTTGCTTGATTA
GATTGATACATCTCCTCTGCTTATATAGAGAGGTTTACTTGACTTATATAGAGAGGTTTA
CTTGACCCCTAAGCAAATGACCATTATCTCTAATTAACCCTAACACTAACAGGCCATATA
GCTAGCCCAGGCCCAATAGGCCTCTTATGTACTCTAACAGTCTCTTGCAGTTCTATAACA
TGACATCAAATTTTTACTCCTAAAATATGAAGTAAAAGGAGTATCATTTTTATATGTTGG
AGACATTCTAGGCTTCTAGTATGCGTAAGAACCAACAATATGGTATATTGTTAGATGAAA
TGTACTCCCTCCATTATCTTTTGTTAGGCATGGTGAAGAGTTTTACATATACCAAGAAAA
TTTTGATATAGTTAGGTGGAGCATTAACAAATGCTGGGCGCTGTGCTTTATGCCTTTATC
CATCAATGCATGCATGCACCAGAGGTTTGGTACCCCTGGTTAAACCAATCAAGCATACTT
CGTGTTTGCTCATGGCCCAAAAACGCTTCGTGTTTGCTGCGTATTTACACGGTATGAGTA
ATTGCAGACACTTGAGTTTGGATTCCAACCTCGGTACGTACCCTCACGCCTAATATACAG
TCAAAACTGAGAAATCAGTGTGCGCCTAAGAAAAGATAATACAGGGAGTAGTCTCTAGTG
CTGTCCTGTCTATTTTTGTAAGAACCTCTCATGGAAGCTTAATAGCCCCATAAATAGCAA
AACATGTGGCACTGTTCACTGAATATTAGGTCATCTAACAAACCACTACCCAACCATATG
TATATGTGATAGATGCTTGGCATTGCCGTAGTCATGTAATGCACATAAAGCAGTAATAAT
CAGCCAAATATGTTTTTATTGAACACGCAGGAGAAATCAGCCGAATATGTCTTTGTAGAC
CCTAGAACTTAATGCAAGTTTTCTATGTGCCCAGTGTATAGACTACAAATCAATCCCTAA
ACCTTAATTTGAAGTTTGTACTGCTTCAGTGGCATCCATAAGTCATCACATTATATGACT
TCAGCTTTAGTGTCATAACCATCCTCACATTTTCTACAATATGCTCCCACACAAAACTTA
GGGAAAATGCAATCATAACCTTATTTTTCCTAGACAATGGTTTTTTTTGGTGACTTTCTG
GGTGCATTCACCTTTTTGTTTTTTTGCATTATATCCTTTCCCGAAGCAGCAAGTTTTGTC
TGTGTATACAAGTTTCATCAACTGTTCAGGCATGTTTCTTTGAATCCCATTGTGTTTACT
TCTTTAGTCATCTACAAATTGAGTGTTTTATTCTTCATTATGCAATGAACTTCAACTAAC
TTGCAAAGTATTTTTGACTCCCAAGCATATAATTGATAACGTATTTACTTGTTGAACATG
GCTTTTCAGAAGTGCAAACATGTTGCCATGTGTGAAGAAGTTGATCAGAATCCACAATCA
CCGCCTGCTGTTATGAGTGATCCTAAACCAAGCAATCCTTGTGCGTTCAGCATTCCAAGG
ACTCCTGTGGATGATGCTAGAATGCAAATTAATAATGTTAGTCCCCAAGGTGCTGGTGCT
ACAACTCCAGTTAATGTCAGTCCCCAGGCTGCTGTTGCTAGAACTCCATTTAATTACACG
AAAGGTGTTGGCACTACGACTCCAGTTAATGTCAGTCCCCAGGCTGCTGTTGCTACAACT
CCATTTAAGTACACTTCGAAAGGTGTTGGCGCTCTGACTCCAGTTCATGTTAGTCCACAA
GGTGCAGGCGCTATGACTAAAGTTAATGTCAGTCCTCAGGCTGCTTGTGCTACAACTCCA
TTTAATTACACTTCGAAAGGTGTTGGCGCTATGACTCCAGTTCATGTTAGTCCACTAGGT
GCAGGCGCTATGACTCCAGTTCATGTTAGTCCACAAGGTGCAGGCACTGCAGCAGCAGTT
AAAGCTAGTCCCCGATGGCATGGATCTAAAGATGGACAGCTAATCTGCCAGTGTACAGCA
GGGAAGTGCAAAAAAATGAGAGTGGACAACGAAGACTGCTATGTTTGTCCTATACCCAAG
GGACAAGGTGCATGCAATTTCAAGGTGCCAGTAACAGCTGTTAAAGGACCACCACAGATC
GGAGACTACAATGTAATGGAAGCCCATGGGAACACTGCAGTTGGAATAGGAGACAACAAT
GCGAATGGATCAGCCAATCCTGCTCAACCTAATGACGATGAGTGGCCATTTGAAATCATC
AACAATGAAATCGTGCCGACAGGTCAAGCAACGGTCCGTGCTGTAGTCCACCAGAACTCA
CCAGGCACGCCGCGCCAGCCGATTGCCATGGCGAGAACACCCGCGACATCACCCATGACG
CCTTTTGGTAGCCGCCCCAGCCCCATGACCCGGCGTCCAAACAACACCTGCTTCGAATGT
GGTGAGGAAGGGCACTGGAGGAATTCCTGCCCTAAACGATCTTCCCAAAATAATGGCTGT
TTCCATTGCGGCATGGCCGGTCACTGGCAGGCCAGTTGTCCCAAGCGAAGAGGGTCTTAG
AACCATGTGGGTGAACTGATGATCTCCATCTCATGCTGATTTGGGCTATGTGCCTCATAA
GCAATCAGGGCTCAGGAGGCAGTGCTAATGTTCCTGCTTAGTAACCTTAATCAGCTTTGG
CATGGTAGCTAGTATATAATAAGGAGGGACAACTGTGAAAAGGGTCTGTAACTGGGCCCA
TCATCTGCCTAGTCTAGTTAATTTAGTTAATAACAGGTCGTGGTATCTATTGTACATATG
CAGTAAGTACTACGTCTCTGAATGGTTCCCTTCAAGAATGCGATGAACAGAACCACGACT
CTGAATGGTACCCTTCAAGAATGGGATGAACTGAGGACCAACTAATTGTAAGGTGCATCC
TTGAAAATCCCTGCTTGTTCTTTGCTTGTGTCCTGTCTGTGACCCCTCTTGCTTCACTAG
CAACTGGTGTTTGTGTTGGAACTACTGAATGGAGGGTTTTCTGGAGCATATGTGTTTCCA
GCTCTTGGGCAATTCTGAATTTCTGATGGATGGATTGCCGCGATTTTTCACAGAAATTGC
CCAAGCCCTGGTCAAATCCTTGCGACTGAACTTTGGCCGCTTCTGAAGCGCTGGGGATCA
C