Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

OQU83434
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:5:41528659:41533399:1 gene:SORBI_3005G114000 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGCGGAGAACGGCGTTCAGCAACACCTGTTACATGACGGCGACCGTTCTAAGATGCCG
CCGCCGGGAAGGGCGAGAAGGTTCCGGCGCTGCCAGACGGCGCCATCTCACAACGTCGAG
CAAGGATCCATTCTCCAGAGGCAGCACATGAGCCGGAAGGGCGCCAGCGGCACATTGCCA
CCGGTGCCGCCAAAGGGGCTGCTCACCAGTGCGCGGCCGAGGTTCTGGCTCGTCGGCATC
CTCCTGCTCGCCTACCTCCTCGCCGGGACCGCCGCGTTCTACCTCGCCATGGACGACATG
TCCGGCGAACGCAGCGGCAACCGCGCGCTGGACGCACTCTACTTCTGCGTGGTCACAATG
ACCACCGTCGGGTACGGCGACATCGTCCCGTCCAGCGACGTTGCCAAGCTGCTGGCCTGC
ATCTTCGCCTTCGCCGGCGTGGCCCTGGTCGGAGCCTTCCTTAGCAAGGCCGCCGACTAC
CTTGTGGAGAAGCAGGAGGCGCTCGTCTTCCGGGCGGTGCACCTGAACCACGCCGACGAC
CCCAAGTCACTGCGGGACATGGAGGCCAACAAGGTCCGTTACAAGCTCTACACCGCCACC
GGCCTCCTTGCCGTAGTCCTCGCGTCCGGGATGGCGTTCCTGACGAAGGTCGAAGGGATG
CGCCCCGTGGACGCCTTCTACTGTGTGTGCGCGACGGTAACCACGCTTGGGTACGGCGAC
CGGAGCTTCTCGTCGACGGCCGGCCGCGCGTTCGCGGCTGCGTGGATCACCGTGAGCACG
TTGGTGGTTGCGCTCTTCTTCCTGTACGCGGCGGAGCTGGCCTCGGAGCGGCGGCAGAGG
GCGCTGGCGCATTGGGTGCTCAGTCGGCGGACTACCAGCATGGACCTCGAGGCGGCGGAC
CTCGACGGCGACAATAAGGTCAGCGCCGCAGAGTTTGCGTTGTACAAGCTCAAGGAGCTG
GGGAAGATCAGACAGGAGGAGATCGCAGAGTTCCTTGAAGAGTTCGAGGAGCTCGACGTT
GACCACTGTGGCACCCTCTCGTCGCACGACCTGGCCGTCGCACAGCTCGGATAG

Peptide Sequence

PEP ID

OQU83434
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:5:41528659:41533399:1 gene:SORBI_3005G114000 transcript:OQU83434 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MAENGVQQHLLHDGDRSKMPPPGRARRFRRCQTAPSHNVEQGSILQRQHMSRKGASGTLP
PVPPKGLLTSARPRFWLVGILLLAYLLAGTAAFYLAMDDMSGERSGNRALDALYFCVVTM
TTVGYGDIVPSSDVAKLLACIFAFAGVALVGAFLSKAADYLVEKQEALVFRAVHLNHADD
PKSLRDMEANKVRYKLYTATGLLAVVLASGMAFLTKVEGMRPVDAFYCVCATVTTLGYGD
RSFSSTAGRAFAAAWITVSTLVVALFFLYAAELASERRQRALAHWVLSRRTTSMDLEAAD
LDGDNKVSAAEFALYKLKELGKIRQEEIAEFLEEFEELDVDHCGTLSSHDLAVAQLG

Transcript Sequence

Transcript ID

OQU83434
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:5:41528659:41533399:1 gene:SORBI_3005G114000 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

TAGACAACAAAAATGCACGTCCACACATGTACAATTAACTTGTGAGTTGTGACAAATGGA
CAATGACAAGGAAACATAACAGGTTGATGCAACGGTATGATGGGACAGGGAGAGATTGAC
AGTTTCCATTATTGCTGCAAGCCTGCAACTCTGAAATTTCTGGCAAATTCTTCATATCTC
TCCTCTCATTTCCAGCAGCCTAACCTAGACCTAGAGAGAGTAATGGCGGAGAACGGCGTT
CAGCAACACCTGTTACATGACGGCGACCGTTCTAAGATGCCGCCGCCGGGAAGGGCGAGA
AGGTTCCGGCGCTGCCAGACGGCGCCATCTCACAACGTCGAGCAAGGATCCATTCTCCAG
AGGCAGCACATGAGCCGGAAGGGCGCCAGCGGCACATTGCCACCGGTGCCGCCAAAGGGG
CTGCTCACCAGTGCGCGGCCGAGGTTCTGGCTCGTCGGCATCCTCCTGCTCGCCTACCTC
CTCGCCGGGACCGCCGCGTTCTACCTCGCCATGGACGACATGTCCGGCGAACGCAGCGGC
AACCGCGCGCTGGACGCACTCTACTTCTGCGTGGTCACAATGACCACCGTCGGGTACGGC
GACATCGTCCCGTCCAGCGACGTTGCCAAGCTGCTGGCCTGCATCTTCGCCTTCGCCGGC
GTGGCCCTGGTCGGAGCCTTCCTTAGCAAGGCCGCCGACTACCTTGTGGAGAAGCAGGAG
GCGCTCGTCTTCCGGGCGGTGCACCTGAACCACGCCGACGACCCCAAGTCACTGCGGGAC
ATGGAGGCCAACAAGGTCCGTTACAAGCTCTACACCGCCACCGGCCTCCTTGCCGTAGTC
CTCGCGTCCGGGATGGCGTTCCTGACGAAGGTCGAAGGGATGCGCCCCGTGGACGCCTTC
TACTGTGTGTGCGCGACGGTAACCACGCTTGGGTACGGCGACCGGAGCTTCTCGTCGACG
GCCGGCCGCGCGTTCGCGGCTGCGTGGATCACCGTGAGCACGTTGGTGGTTGCGCTCTTC
TTCCTGTACGCGGCGGAGCTGGCCTCGGAGCGGCGGCAGAGGGCGCTGGCGCATTGGGTG
CTCAGTCGGCGGACTACCAGCATGGACCTCGAGGCGGCGGACCTCGACGGCGACAATAAG
GTCAGCGCCGCAGAGTTTGCGTTGTACAAGCTCAAGGAGCTGGGGAAGATCAGACAGGAG
GAGATCGCAGAGTTCCTTGAAGAGTTCGAGGAGCTCGACGTTGACCACTGTGGCACCCTC
TCGTCGCACGACCTGGCCGTCGCACAGCTCGGATAGACCGGCAATCACCGGGAGGCGGGG
AGCCACTAACACGCAGCAGGGTTCCGTGGCCAGGTGCGCTCCTTCCGCAGGATAAGCTCT
GCGCTCAATTTTCAGATGGGCTGCCATTTGTATAGGCCGTATTGTTGGGCCGATCAGGCT
TCTTTACAATCTCTTGTTGAATGATCATTTAATAACCGTAGTACTGAAGTACTTGTAAGA
AAGTAGTGAATATACTTTCAACTGTTCTGCATTGGATGACATTTTTGAAACATTTTATGC
CCTGATTGTCACAGAATTGACCAAATTATAAGAGCACAAGTGTAAAAAGATCATCGAAGC
AATCAATTTTCTAAACTTGAGCATATAAATTCTGGTAGTCAACCGAAATCACCAAGGATT
TCAAACCAACTGAGCAACATACTAATTAAGATCGTAATAAGTTCAGCACAATACATCACC
TGTGTAACACTCCTAGTGTTAGCTTGCATGTTACCCATGAGCATTGCATCAACATAAGCA
TCATCATGATCACTCATGAGCATCATACCATGATCACATGCCCTTTACTCCATGTACTAT
GTGATTAAATTGCTTGTGTGACTTGCTTTGAGTGACTTTAGTGGGTGACCAATGCATGTA
AGTGTGCAATCTTTTCCAAAATACTTTAATCATGTTTAGAACATCATTTTGAACAAAGTT
CATGTTGAAGGTTTTGTCCAAAAATGTCTCTAAGTCATGGTTAACCCTAGAATGACCTAT
TTGACCCCCTAAACCTTCTTTCAAAGATGTTTTATGAAAGTAATGTTAGAGATCTTGTAT
GTCTGTGACACCTGAAGCAAAGATGTAGAGAATTTCATAAGCTACAAAAGATATGTTGAT
GACTTTTTATGAAAAAGCTTAGAACACATCCAAAATTCACTCTCAAGCCAAAAATCAGGG
CTGATTTCACACTCAGCTGAAATTGGCTATGTCTTGGATGACACAGTTTCGAGGTAGGGT
TGTTGGGAGCCTTGTAGTTTGAAATCTAGACCGATTTAGACTGAGCTCGTGTAATCAAAT
TTGTAGAACTCGTGTAGCTCTATCCAGAGGATCAAATCTCAGCTAAAACCACCAAGTGAG
CTGAGAGTAAAACGTCGACGAACTTCGGGATTCAGTCACTGCAATCGGCGTTTCAGGAAA
ACGTTTCAGAGTGGACAGAGCTCACCCGCCGCCGCGTGTCTGGCCACCTGTCGGCCGTAC
GCCGTCGACGGCCCCCTCTGTCAGCTCCCACGGCGTCCTCAAGTCGCCATGCACCGAGTG
GATGCCTCAGACGCGACCTCCACTCGCTCAGCGCCTCCCATTTCGCCCCGCCGTCGCCTC
GGTGAGCTCCGCCGCGTTTCGGCGAGCTTCTCCGGCCGTTCCACCGCACCTCCGGCCAAG
CCAGCCCGCCCAGAGCTCCACCTCGATGTCCTCTACCTCGGCGTCACCTCCTTGGCCGCT
GTCGAGCACGGGTAAGGTGGCATTGCCGAGCTCCGAGCCGTTCTCCCTCGCCGGAGTTCC
ACCCGAGCTCACCGGCAACGTGGCCAGGCCTCTCTGCTCCACCATTTTCCTTCATTCTTG
TTCCTATCACTTCCCCTTGGTTCACTGATGCTCGGCGTGAAGCTCTACCGCGTCGCCATT
GCCTGGATCCGCCGGCGTAACGCCGCGCAGCGCCGCCGCTCCGCCATTCCCGATGGCGAG
CACCCTAGGGTCCAGTAGAGCGCGGGTAAAGTAGGTCAACAAAGTCGTCTTGATGAGAGG
AACACGTAGATGCCCTTGGATCCGGCCGAGACCTCGTCGTCGTTGAGCTTCGCCGGCGAC
GAGCATCTCCCCTGTCTCTGTCTCTCTGACGCGCGGGTCCCGGGTGTTAGCCGCTCCCTC
CCACACCTCTGATTCACTGTTTTGCAGATCCTGTGTTGATTTTGAAAAATTCATATCTCG
AGTTTGATAGATCCAAATGACATGGTTCCAATTTCGCTAGGTTCCAGTATGAGTCTAGTT
TTTAATAAAAATATGAAACATGCCATGTTTTTGCAGAAATAAATATATATAAATTAATCT
TAGATTATGAGGAGGTAATTATATCTTGAGATCTGTTGGTCTGTTGGCCCTACAAATTTA
GGGTGTTGTTGCTAAGGTTATGAATAAGCTCTGATAAATTTATCATGATTTTTGGAAGCC
TTATTGTGAAGTTAAAAATAATTCTTGCTTAAATAGGAGTTTCTTGTGGTATTTTTAGTA
AATAAGTTATAGCTCCTTTTGTGGTGAAACTTTCTGAGTGTTGTACTCATATGTAGACAA
AGCTAGAAAAAATCTAAAATCTGTTGTTTGACACGTTTTGATAAGGTTTCACATTTATGC
CTTGCATGCCTTTGTTAGCTTGTTATTTTTATACCTCACAACCTGTATGTGCAAATGTCC
TGAACATTTTACAGTGGTCTTATGTTAGCATAAGTAGCTTGCTGTAAGTTTCTCTGAATT
TTTGGAGCACTTGGAATGCATGTTCATAAAATCACCTTAATAATTAAATAAATGAAAAAG
GTGATGATAGAAATAAGTTTAGACCTTGCCATGATGTTTTCTAGTGCTTCTTAGACATGT
TCTACCTACTGGTGCAACTGGATTGACCCTTTGATACATTCTCAATATGTGCAAAATATT
ATTTTTGCTATTTATGTCTTTCCTAGAGCATTTCTGTGTAGCTGATAGCAATTGCTTAAC
AATTAATTGAAGATGATGTTTTCTGGGAAACTTGTCTACAATAAACTTGTAGCTAACTTG
CTTATCTACTTCGTTTCCAAATTTCATGACATTTGGTTGAGTAATTTACACGTTATGAAT
AATACCAGTAGCTGCTGCAAAGTGCTTGCTCTCTGGATTTTCCAGAACAGCCAGCCAACT
TTGTATGTTTTAGCATATTTCGATTGGGAATCATTCTCGGATGTCTAAAAGTGAATTGTA
GACAATTTGCTAAGCTTTCCAGAAAGTACTTACTTTCTTAGTTTGGCCAACTGAGGCTTA
AGTTATAGCTAAAACTTGTGACAGGCTGGTTTGTCTACTAAACCAGTGACTGAGTAGGAG
TAGCTAGGATTGTTCGACTTGTCTAGTTAGCCTCTCTACCAGAGAAGAAGTATGCACTTA
CTTGTTATTCTATAACCCACTTAACTTTAGGAGCTTATGCTCATGTTTATACCTTGTTGT
GTGTTCTTTAGTTCCTCATCATGGCATCATGCTTCATATGTGCATTCTCTAATTTATTTC
CTTGTCATGCATACCTAGGTGCACCCAAGGGCATGACGGTTTTGGAGTTCGAGCTGCCGG
AGTCGGAAGGACAGCAAGGGGGGCCACCTCAAGGAGCTGAGGAGGAGGAGGACTTGCCGG
AGTGTCCCGACCATCGCCCGTCCACCTACGTCGAAGGCAAGCCCCGGAGCATTATAAGCC
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