Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

OQU83202
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:5:13453261:13455860:-1 gene:SORBI_3005G091500 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGACGACGACGACGACGACGTCATCCAAGGCGACGGGGCCATGGAGCAGGCTGTCGGCG
GCGGAGGCGGCCGTGAACCGCGCCGTGGCCGGGAGCCGCGTGGGGGCCTACTTCAAGCTG
GACGCGCGGAAGAGCACCTTCACCAAGGAGCTCCGCGCGGGCGCCGCCACGTTCCTCACC
ATGGCCTACATCATCTCCGTCAACGCCGCCGTCCTCACCGACTCCGGCGGGCCGTGCACG
GCGCGGGACTGCACCCCCGTGGCCACCGCCAACTCCACGGTCGTCGTCCCGCCTGGCCCG
GAGTGCACGGTCGTCGGGGCCAACCCGGGGTACCAGCAGTGCCTGGCGCGCACCAAGAGC
GACCTCATCGTGGCCACGGCCGTGGCCGCCATGGCGGGCTCCTTCGCCATGGGCGTCTTC
GCCAACCTTCCCTTGGCGCTTGCGCCCGGCATGGGCGCCAACGCCTACTTCGCCTACAAC
ATGGTGGGGTTCCACGGGTCAGGCCCCATCGGCTACCGCACGGCGCTGGCCGTCGTGATG
CTGGAGGGACTCGTCTTCTTCGCGCTGTCCGCCGTGGGTCTCCGGTCAAGGCTGGCCCGG
ATGATCCCGCGGAACATCCGGCTGGCCTCGGCGTTGGGGATCGGCCTGTTCCTGGCCTTC
ACGGGCCTGCAGGCGCACCAGGGCGTCGGGCTCGTCGGCGCCAGCCCGTCGACGCTGGTC
ACGCTCACGGCCTGCTCCGACGTGGACCCGGCCACGGGCGCCTGCCTCGGCGGCACCATG
CGGTCACCGACGTTCTGGCTCGGCGCCGTGGGGTTCCTCATCACGGCCACCTGCCTCGCC
AGGGACGTCAAAGGGAGCATGATCTACGGCATCCTCTTCGTCACCGTCGTGTCCTGGATC
AGAGGCACCAGCGTGACGGTGTTCCCGGACACGGCGGCGGGCAATGCCGGCTTCGAGTAC
TTCAAGAAAGTGGTGGACTTTCACATGATCCGGACCACCGCCGGGAAGCTCAGCTTCGCC
GGCTTCCGGCACGGCAACGTGTGGCTGGCCTTCTTCACGCTCCTGTACGTGGACGTCCTG
GACACGACGGGGACAATGTACTCGATGGCGGAGTACGCCGGGTTCGTGGACGAGGACGGC
GGCGGCGGGTTCGAGGGCGAGTACCGCGCGTTCCTGGTGGACGCCGGGTCGACGGTGCTC
AGCGCGGGGCTGGGGAGCTCGACGGTGACCACCTACATCGAGTCGACGGCGGGGATCCGG
GAAGGCGGGCGGACGGGGATCACCGCCGTCACCGTGGCCGCCTGCTTCCTGGCGTCGCTC
TTCTTCGGCCCGCTGCTCATGAGCGTGCCGCCGTGGGCAGTGGGACCGTCGCTGGTGCTC
GTGGGCGCCATGATGATGCGCGTCGCCAGGGACATCGAGTGGGGCGACATGAAGGAGGGC
GTCCCGGCGTTCGTCACCATGGCGCTCATGCCGCTGTCCTTCTCCATCGCCTACGGCATC
ATCGCCGGGCTGGGAGTCTACGTCGCGCTGCACTGGTACGACTGGGCGAGACACGGGTAC
GGCAAGCTCAGCAACGCGCTGGACGAGCGCCGGAACCAGGTGGCCGCCGCCGCCGGCGAA
ATCGGCACGGCGCCGGCAGCGCACGACGTCGTCTGA

Peptide Sequence

PEP ID

OQU83202
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:5:13453261:13455860:-1 gene:SORBI_3005G091500 transcript:OQU83202 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MTTTTTTSSKATGPWSRLSAAEAAVNRAVAGSRVGAYFKLDARKSTFTKELRAGAATFLT
MAYIISVNAAVLTDSGGPCTARDCTPVATANSTVVVPPGPECTVVGANPGYQQCLARTKS
DLIVATAVAAMAGSFAMGVFANLPLALAPGMGANAYFAYNMVGFHGSGPIGYRTALAVVM
LEGLVFFALSAVGLRSRLARMIPRNIRLASALGIGLFLAFTGLQAHQGVGLVGASPSTLV
TLTACSDVDPATGACLGGTMRSPTFWLGAVGFLITATCLARDVKGSMIYGILFVTVVSWI
RGTSVTVFPDTAAGNAGFEYFKKVVDFHMIRTTAGKLSFAGFRHGNVWLAFFTLLYVDVL
DTTGTMYSMAEYAGFVDEDGGGGFEGEYRAFLVDAGSTVLSAGLGSSTVTTYIESTAGIR
EGGRTGITAVTVAACFLASLFFGPLLMSVPPWAVGPSLVLVGAMMMRVARDIEWGDMKEG
VPAFVTMALMPLSFSIAYGIIAGLGVYVALHWYDWARHGYGKLSNALDERRNQVAAAAGE
IGTAPAAHDVV

Transcript Sequence

Transcript ID

OQU83202
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:5:13453261:13455860:-1 gene:SORBI_3005G091500 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

CGGGTCCAAACAGACTCGATCGTAAGACCACCACACCACACCACACAAACACGCCGTGGC
CAGGGGAGAAGGACGAAGCCAACACCAGCAAGAAGAAGATAATGACGACGACGACGACGA
CGTCATCCAAGGCGACGGGGCCATGGAGCAGGCTGTCGGCGGCGGAGGCGGCCGTGAACC
GCGCCGTGGCCGGGAGCCGCGTGGGGGCCTACTTCAAGCTGGACGCGCGGAAGAGCACCT
TCACCAAGGAGCTCCGCGCGGGCGCCGCCACGTTCCTCACCATGGCCTACATCATCTCCG
TCAACGCCGCCGTCCTCACCGACTCCGGCGGGCCGTGCACGGCGCGGGACTGCACCCCCG
TGGCCACCGCCAACTCCACGGTCGTCGTCCCGCCTGGCCCGGAGTGCACGGTCGTCGGGG
CCAACCCGGGGTACCAGCAGTGCCTGGCGCGCACCAAGAGCGACCTCATCGTGGCCACGG
CCGTGGCCGCCATGGCGGGCTCCTTCGCCATGGGCGTCTTCGCCAACCTTCCCTTGGCGC
TTGCGCCCGGCATGGGCGCCAACGCCTACTTCGCCTACAACATGGTGGGGTTCCACGGGT
CAGGCCCCATCGGCTACCGCACGGCGCTGGCCGTCGTGATGCTGGAGGGACTCGTCTTCT
TCGCGCTGTCCGCCGTGGGTCTCCGGTCAAGGCTGGCCCGGATGATCCCGCGGAACATCC
GGCTGGCCTCGGCGTTGGGGATCGGCCTGTTCCTGGCCTTCACGGGCCTGCAGGCGCACC
AGGGCGTCGGGCTCGTCGGCGCCAGCCCGTCGACGCTGGTCACGCTCACGGCCTGCTCCG
ACGTGGACCCGGCCACGGGCGCCTGCCTCGGCGGCACCATGCGGTCACCGACGTTCTGGC
TCGGCGCCGTGGGGTTCCTCATCACGGCCACCTGCCTCGCCAGGGACGTCAAAGGGAGCA
TGATCTACGGCATCCTCTTCGTCACCGTCGTGTCCTGGATCAGAGGCACCAGCGTGACGG
TGTTCCCGGACACGGCGGCGGGCAATGCCGGCTTCGAGTACTTCAAGAAAGTGGTGGACT
TTCACATGATCCGGACCACCGCCGGGAAGCTCAGCTTCGCCGGCTTCCGGCACGGCAACG
TGTGGCTGGCCTTCTTCACGCTCCTGTACGTGGACGTCCTGGACACGACGGGGACAATGT
ACTCGATGGCGGAGTACGCCGGGTTCGTGGACGAGGACGGCGGCGGCGGGTTCGAGGGCG
AGTACCGCGCGTTCCTGGTGGACGCCGGGTCGACGGTGCTCAGCGCGGGGCTGGGGAGCT
CGACGGTGACCACCTACATCGAGTCGACGGCGGGGATCCGGGAAGGCGGGCGGACGGGGA
TCACCGCCGTCACCGTGGCCGCCTGCTTCCTGGCGTCGCTCTTCTTCGGCCCGCTGCTCA
TGAGCGTGCCGCCGTGGGCAGTGGGACCGTCGCTGGTGCTCGTGGGCGCCATGATGATGC
GCGTCGCCAGGGACATCGAGTGGGGCGACATGAAGGAGGGCGTCCCGGCGTTCGTCACCA
TGGCGCTCATGCCGCTGTCCTTCTCCATCGCCTACGGCATCATCGCCGGGCTGGGAGTCT
ACGTCGCGCTGCACTGGTACGACTGGGCGAGACACGGGTACGGCAAGCTCAGCAACGCGC
TGGACGAGCGCCGGAACCAGGTGGCCGCCGCCGCCGGCGAAATCGGCACGGCGCCGGCAG
CGCACGACGTCGTCTGACGATCGAACTCCCGATGTGTGCGTGCAAGACCGTAGCAGCAGC
TGGTCGTGTTGTTTAGTAGGCTGGCTACCCGCAACAAAAAAAATATATATGATGTTGTTG
TTTAGTAGGGTGATTATTAGCTTTTTTAGCTTGATCATGCATCATCACTTTGGGAGGGCT
TTCAGATGGCAGGGGTTGGTGCTGGGGGCCCTGTGTATGTATGGTAAAGGGGCTGGCTGC
TGGGGAGATTCTTGATGTGTTTGTACTTTGACCATCATTGCAGCCTTCTCATTTGATTCC
CTCACACTTGCTTTAGGGTCTGTGTTTGATTGCTACACCTGCACGAGGGCTAGTGTCCAT
CAACCCGGGCGTTGCGCGGGTTTTTATTTATTTTTAGCTAAAATTTTTGTTATTAATTTG
TTAGCATATTACATGAAGATGGATAGATTATTCTCAACAGCTTGAATGCAGGAATGAAAA
ATATTATGTGTGAAGTAAAGTTTAATATTCTTAAGATGCAAAAAAAAACACACACACAAT
CTCTATGGATATAGCTGGTTTTAATAAAAATATATACACATGTCACATTTTAATAAATAT
TTTTTAAAAAATAAGGAGTCAAAGTTATGTTTTGGAGACCATGTCACTATCCAAAACTTC
TTTTTTAGCAACATGGAGGAGTATTATATTAAAAGAAATATTATGTAACAATGACTTATT
GATTATATTGCATCGACAAGCATAAGATGGAATCCGTAGGCTGTTTGTGTTAGATTGGCT
ACCATTGAAGCTTATAGGGACATGTGTGTGGGTGTGGCTCATATTTTGATATTGAACTGT
TTAGGGAATATTAAGATAGC