Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

OQU82912
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:5:4190983:4195626:1 gene:SORBI_3005G044400 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGAAGGCGTGGGAGGTGATGCGGGGCCGCGCATACGCCTTCGACCTCGTCCTCACCGAG
GTCGCCATGCCCTCGCTCTCCGGCATCCAGCTGCTCTCCAGGATCGTCGCCGCCGACGAG
TGCAAGAACATCCCCGTCATCATGATGTCGTCCCAAGATTCTATTGGCACGGTGCTCAAG
TGCATGCAGAAAGGTGCGGTGGACTTCCTTGTGAAACCGGTGAGAAAGAACGAGCTGCGT
AACTTATGGCAACATGTATGGAGGCGCCATGCAATGAATTGCCAGACAAATGGATCAGAA
AATAATGCAGCCAGCAATCATATAAGTGCAAATGTTGCTAATGGGTCAAAGACAGGAGAA
AACAGCGATGAGGAAAGTGATGCACAAAGCTTTGGTAGCAAGAGGGAGACCGAAATTCAG
AGTGTTGAGAAGTTACCAGACATTCGTAGAGATGAAGATGAAGTGGCTGGCTCATCCAAA
AAAACTGAATCACAAAATAAGTCTTATGATGTCAGAGTAAACACAAAAGTGGATGCGTCA
AAAGATAGCGATGGTGCTCCAAGTGGAAGTGAGAAGAATGTACACTCCAAATGCCTTAAT
GGTATTACTTCTGCAAAAGTGGCTGAGCAAATTATGGATAATGCCTTGAGGATCACGGAT
GCAAGTTCACGTCGTCCAAGCAATCTTGGCAAAGATTTGGCTATGACTGAGCCAGAAGCT
GACAGAAAATGCCAATCTTCAGTCATGGAAAATAATGCTGTCACAGAAAATAACCTTGGT
GTAAAGTCAAAGGGTGCTGCAATATGTCCTGCTGATTCTTGCCCCTCCCAGTTTCTGGAG
ACCAACTTGGGAAAGCAACACCATCTTAATGGTTACAAAAACCAAGAATTCAGGGAAAAA
GATATCTTTAATCACTCGAATTCCTCTGCCTTTTCAAGATATGGCAATAAAAGGATAGAA
CCATCAGGGGAAATACAATTTTTTCCTTCTCTCTGCATCACTGGGCAAGAGCATGTTCAT
GGCAAGGACCCAGTTTTCCAACCCAATGGGGTGTTGCTGCCTCCCAATGAACATAATACA
GGTGAGAGTACAAGGCAAACTCGAATTACTTTGGACAGTAGCCCGGAGGGTGCTGCCATC
ATGTGTTCCAGTAGTGCTAGGGAAGATGCTGGTGTAAGTAGTTCTTCCCATAGAAAGGAC
AGCATGAGCCATCCGTCATATGGGTTTATTCCTGTTCCAATTCCTGTCGGTCCTGGGATG
CCCTACCATTATGGTGCAATTCTGCAGCCAGTATACTACCCACAGGGTCCTCTTATGCAC
TGTGATTCAGCTGGAATCAACAAGGCAGCAATCCAGCATGGCTCTGGTCAATCTAATTAC
CATGAAGCTCCTGGTAAACCATCTCAGGATGATGAGCACAAACAGTCAGAGGAAAACCAC
CAGTTGCATCATTCAAGACAAATTCTTCGGGAATCAGGAGAACCAATTGAGATGGCGAGA
GCTCACATGGATCGCGCTAACCAGAGTGCAAGTTGCAGCCAAGATATCTGCAAAGGAAGT
GGATGCACGGGTAGTGGTGAAGCCGATATCAATGCAAATACAATGGTTGCCCTTGAGAGT
GGCAACGAAAGTGGCATCCAAAATGGTGATAGGTCTCGCCGTGAAGCCGCGTTGATGAAG
TTCCGCATGAAAAGGAAAGATAGATGCTTCGAGAAAAAGGTTAGGTATCATAGCAGGAAG
AAGCTTGCAGAGCAAAGGCCAAGAGTTAAGGGACAATTTGTAAGCCAAAAGCAGAAATCT
GCTACAACAACAGAAGCAGAAACTGACTTGTGA

Peptide Sequence

PEP ID

OQU82912
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:5:4190983:4195626:1 gene:SORBI_3005G044400 transcript:OQU82912 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MKAWEVMRGRAYAFDLVLTEVAMPSLSGIQLLSRIVAADECKNIPVIMMSSQDSIGTVLK
CMQKGAVDFLVKPVRKNELRNLWQHVWRRHAMNCQTNGSENNAASNHISANVANGSKTGE
NSDEESDAQSFGSKRETEIQSVEKLPDIRRDEDEVAGSSKKTESQNKSYDVRVNTKVDAS
KDSDGAPSGSEKNVHSKCLNGITSAKVAEQIMDNALRITDASSRRPSNLGKDLAMTEPEA
DRKCQSSVMENNAVTENNLGVKSKGAAICPADSCPSQFLETNLGKQHHLNGYKNQEFREK
DIFNHSNSSAFSRYGNKRIEPSGEIQFFPSLCITGQEHVHGKDPVFQPNGVLLPPNEHNT
GESTRQTRITLDSSPEGAAIMCSSSAREDAGVSSSSHRKDSMSHPSYGFIPVPIPVGPGM
PYHYGAILQPVYYPQGPLMHCDSAGINKAAIQHGSGQSNYHEAPGKPSQDDEHKQSEENH
QLHHSRQILRESGEPIEMARAHMDRANQSASCSQDICKGSGCTGSGEADINANTMVALES
GNESGIQNGDRSRREAALMKFRMKRKDRCFEKKVRYHSRKKLAEQRPRVKGQFVSQKQKS
ATTTEAETDL

Transcript Sequence

Transcript ID

OQU82912
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:5:4190983:4195626:1 gene:SORBI_3005G044400 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

CCTGCTTCTTCCCCACCCCGCCGGTCGTTAATCCCCACGGGAAATTCTCCCTTGTCCTAA
CTCCTCTCTCCCTCCCTCTCTCTCTTCCTTTGGGAGACGGACGGCAGTGGCGGCGGTCGC
GGACGGGATGAAGGCGTGGGAGGTGATGCGGGGCCGCGCATACGCCTTCGACCTCGTCCT
CACCGAGGTCGCCATGCCCTCGCTCTCCGGCATCCAGCTGCTCTCCAGGATCGTCGCCGC
CGACGAGTGCAAGAACATCCCCGTCATCATGATGTCGTCCCAAGATTCTATTGGCACGGT
GCTCAAGTGCATGCAGAAAGGTGCGGTGGACTTCCTTGTGAAACCGGTGAGAAAGAACGA
GCTGCGTAACTTATGGCAACATGTATGGAGGCGCCATGCAATGAATTGCCAGACAAATGG
ATCAGAAAATAATGCAGCCAGCAATCATATAAGTGCAAATGTTGCTAATGGGTCAAAGAC
AGGAGAAAACAGCGATGAGGAAAGTGATGCACAAAGCTTTGGTAGCAAGAGGGAGACCGA
AATTCAGAGTGTTGAGAAGTTACCAGACATTCGTAGAGATGAAGATGAAGTGGCTGGCTC
ATCCAAAAAAACTGAATCACAAAATAAGTCTTATGATGTCAGAGTAAACACAAAAGTGGA
TGCGTCAAAAGATAGCGATGGTGCTCCAAGTGGAAGTGAGAAGAATGTACACTCCAAATG
CCTTAATGGTATTACTTCTGCAAAAGTGGCTGAGCAAATTATGGATAATGCCTTGAGGAT
CACGGATGCAAGTTCACGTCGTCCAAGCAATCTTGGCAAAGATTTGGCTATGACTGAGCC
AGAAGCTGACAGAAAATGCCAATCTTCAGTCATGGAAAATAATGCTGTCACAGAAAATAA
CCTTGGTGTAAAGTCAAAGGGTGCTGCAATATGTCCTGCTGATTCTTGCCCCTCCCAGTT
TCTGGAGACCAACTTGGGAAAGCAACACCATCTTAATGGTTACAAAAACCAAGAATTCAG
GGAAAAAGATATCTTTAATCACTCGAATTCCTCTGCCTTTTCAAGATATGGCAATAAAAG
GATAGAACCATCAGGGGAAATACAATTTTTTCCTTCTCTCTGCATCACTGGGCAAGAGCA
TGTTCATGGCAAGGACCCAGTTTTCCAACCCAATGGGGTGTTGCTGCCTCCCAATGAACA
TAATACAGGTGAGAGTACAAGGCAAACTCGAATTACTTTGGACAGTAGCCCGGAGGGTGC
TGCCATCATGTGTTCCAGTAGTGCTAGGGAAGATGCTGGTGTAAGTAGTTCTTCCCATAG
AAAGGACAGCATGAGCCATCCGTCATATGGGTTTATTCCTGTTCCAATTCCTGTCGGTCC
TGGGATGCCCTACCATTATGGTGCAATTCTGCAGCCAGTATACTACCCACAGGGTCCTCT
TATGCACTGTGATTCAGCTGGAATCAACAAGGCAGCAATCCAGCATGGCTCTGGTCAATC
TAATTACCATGAAGCTCCTGGTAAACCATCTCAGGATGATGAGCACAAACAGTCAGAGGA
AAACCACCAGTTGCATCATTCAAGACAAATTCTTCGGGAATCAGGAGAACCAATTGAGAT
GGCGAGAGCTCACATGGATCGCGCTAACCAGAGTGCAAGTTGCAGCCAAGATATCTGCAA
AGGAAGTGGATGCACGGGTAGTGGTGAAGCCGATATCAATGCAAATACAATGGTTGCCCT
TGAGAGTGGCAACGAAAGTGGCATCCAAAATGGTGATAGGTCTCGCCGTGAAGCCGCGTT
GATGAAGTTCCGCATGAAAAGGAAAGATAGATGCTTCGAGAAAAAGGTTAGGTATCATAG
CAGGAAGAAGCTTGCAGAGCAAAGGCCAAGAGTTAAGGGACAATTTGTAAGCCAAAAGCA
GAAATCTGCTACAACAACAGAAGCAGAAACTGACTTGTGACCGGCGTTAATTTGTAACTG
TAATTTTGATTCTTGCTTGCCCACCAGGTGTGGGCAATTGGACTGATAATACTGAAGGCT
GGCAACAGTTTTTCCCTTACATGGTTAGCCTTTCTGTACAATGGTGAACTCTTTAGTCTT
TATGTCTAGTGTTTGTTGGCATTCAAGCCTTATTTTGTAAAGTACATCAAATTGACGACA
AATGTTCAGAGTGAAAGGGGGGTGTGGGGGATTAGGAAAACGGTGCAACCACCAGATTTC
CTCTATGTACTTAGATGTTTGTGGAGTGAGAAAGCAGAGCCTGTACAGCTTATTCACCCA
TTTTGTTGCCATTAAAATAGTAGTAACTTGTAACTACTAACTACTGCTATGACAACAACA
GACACTGTTGTAGAACTTAGAACAGCCTTACAGTCAGCTGGTCTTTCCCATTGGGACCAT
GACATTTTCATTTAGTGCTTAATCCTGTGAGTAATCCCCTCGATAAGACGCCCTCCTGTA
TGCAGGACAGTCAAGATTTGTTTGATCCAATCCAAGCATCC