Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

OQU82896
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:5:3657558:3661813:1 gene:SORBI_3005G040500 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGCCTCCGAGGCGCGTGGGAGCTGCTGCAGCGAGGGGCGAGGACCACATCGGCGCCCTC
CCAGACGATCTCCTCCTCCACGTGCTGTCCTTCCTGCCGGCGCATGATGCCGTGCGCACG
TGCGTGCTCTCCCGCCGCTGGCGCCCGGTCTGGAAGTCCTTGCGCGTCCTGCGCTTCACC
AAGCACCAGAGCTGGGGAAGCGCGACCAAGTTCAATAGGTTTGCCAACAGTGTGCTGTTC
TTCCGCAACCGGGCACCTCTGGAAGAGCTCACGTTCGAGACCTACATGTACGATGCTATA
AACCCTCTCGTCGATAAAGACCAAAAGAATGAACGGGTTAAATATGCGCAGAAGTGGATC
ATGTACGCCTTAACGCACAATGTGCAGGTGCTCAGAGTCCTTGTGAACTCAAGGCTCAGC
AGACCTCAGCTGCGGCCCGTACCCCTGCTGCGGCTCAGTGAACCTCTCATCTCCAAGCAC
TTGATGACCTTGGAGCTTAAATCTGTAGTGTTGACTAGTAACTCTATGGATTTCTCGAGC
TGCCCTGCCTTAAAGAATCTTAAAATAAGGCATTCCAAAATTTGGGTCCACAAGATATCT
TCCCAATCACTAAGTCGTCTAAGTGTCAAGAATTGTGAGTTTTCTGGTGATATATGCACT
CAGATTTTGGCCCCAAATCTATCATCACTTCTACTGGACGTGCGTTCTGGCAGGCTTCCT
TACTTTCCAAGTGCAGTGTTGCTAGTGAAAGCACATATCAGACTTGATCAGTACTGTAGG
GATCGCTGTTGGCACAGCAACTTTGAACATTGTGCTCATGATACATGTGTTGATTGTTAC
GGTAATAATGACAGGAGTGCCAAGTGTGTGCTTCTTAGAGGCTTGTCCAATGCTAAAAAT
TTGGAGCTGGCAGTTCAATTTTCAGTCTACATTCAGAATCGTGCAGCGGGACTTAACTAT
GATGTGGAAATGAGAGAAAGTTGTAGTTCAAATGAAAAAATTGCTCTGCCTGAGCACCTT
AAATTAGTCGAAGTCAGATGCCAAAAGATTGCTGAAAATGTTCACAGATTTGTGGATGTC
TTGAATGCCTATGGCATAACTTCTGATATAATCAATATCGTGGAGATGGATGTCTGA

Peptide Sequence

PEP ID

OQU82896
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:5:3657558:3661813:1 gene:SORBI_3005G040500 transcript:OQU82896 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MPPRRVGAAAARGEDHIGALPDDLLLHVLSFLPAHDAVRTCVLSRRWRPVWKSLRVLRFT
KHQSWGSATKFNRFANSVLFFRNRAPLEELTFETYMYDAINPLVDKDQKNERVKYAQKWI
MYALTHNVQVLRVLVNSRLSRPQLRPVPLLRLSEPLISKHLMTLELKSVVLTSNSMDFSS
CPALKNLKIRHSKIWVHKISSQSLSRLSVKNCEFSGDICTQILAPNLSSLLLDVRSGRLP
YFPSAVLLVKAHIRLDQYCRDRCWHSNFEHCAHDTCVDCYGNNDRSAKCVLLRGLSNAKN
LELAVQFSVYIQNRAAGLNYDVEMRESCSSNEKIALPEHLKLVEVRCQKIAENVHRFVDV
LNAYGITSDIINIVEMDV

Transcript Sequence

Transcript ID

OQU82896
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:5:3657558:3661813:1 gene:SORBI_3005G040500 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

CCCAAAAAAAAAAAAACTGATCCCATTTCCCAAATTCCCAATCGGCCTGCGCCCCTGCCT
GCCCATTCGCGCCGCCCCCGTCGACCTAGAAGACGCCGCCGTCCCATTTCTCCCGTCAAA
CCCCACGGCGGCCCCTTCCACCGCTAGCTCCACTGCGCCGGATCCCCTTCCCCCTTGTCC
AGCGCAGCGCTCGTTGGCCGAGGAGACGCCGTCGCCCTTTCTTATTCGCTCATAAGTCAT
ATCCCGTCCCCTTCTCCGCCGTCCACTGCCCCTGCCGGCTGCCGAGCGGGCCTTCCAACG
GGCGAACTGAGGTGAGCTTTTCGCATCTCCTCCATTCCCATGGTTATCCTCTGGCGTCTG
AACGCCTTGTCCTGTCGCAGCACCGGCGCCCGGCACCTGTTCGACGCAATGCCTCCGAGG
CGCGTGGGAGCTGCTGCAGCGAGGGGCGAGGACCACATCGGCGCCCTCCCAGACGATCTC
CTCCTCCACGTGCTGTCCTTCCTGCCGGCGCATGATGCCGTGCGCACGTGCGTGCTCTCC
CGCCGCTGGCGCCCGGTCTGGAAGTCCTTGCGCGTCCTGCGCTTCACCAAGCACCAGAGC
TGGGGAAGCGCGACCAAGTTCAATAGGTTTGCCAACAGTGTGCTGTTCTTCCGCAACCGG
GCACCTCTGGAAGAGCTCACGTTCGAGACCTACATGTACGATGCTATAAACCCTCTCGTC
GATAAAGACCAAAAGAATGAACGGGTTAAATATGCGCAGAAGTGGATCATGTACGCCTTA
ACGCACAATGTGCAGGTGCTCAGAGTCCTTGTGAACTCAAGGCTCAGCAGACCTCAGCTG
CGGCCCGTACCCCTGCTGCGGCTCAGTGAACCTCTCATCTCCAAGCACTTGATGACCTTG
GAGCTTAAATCTGTAGTGTTGACTAGTAACTCTATGGATTTCTCGAGCTGCCCTGCCTTA
AAGAATCTTAAAATAAGGCATTCCAAAATTTGGGTCCACAAGATATCTTCCCAATCACTA
AGTCGTCTAAGTGTCAAGAATTGTGAGTTTTCTGGTGATATATGCACTCAGATTTTGGCC
CCAAATCTATCATCACTTCTACTGGACGTGCGTTCTGGCAGGCTTCCTTACTTTCCAAGT
GCAGTGTTGCTAGTGAAAGCACATATCAGACTTGATCAGTACTGTAGGGATCGCTGTTGG
CACAGCAACTTTGAACATTGTGCTCATGATACATGTGTTGATTGTTACGGTAATAATGAC
AGGAGTGCCAAGTGTGTGCTTCTTAGAGGCTTGTCCAATGCTAAAAATTTGGAGCTGGCA
GTTCAATTTTCAGTCTACATTCAGAATCGTGCAGCGGGACTTAACTATGATGTGGAAATG
AGAGAAAGTTGTAGTTCAAATGAAAAAATTGCTCTGCCTGAGCACCTTAAATTAGTCGAA
GTCAGATGCCAAAAGATTGCTGAAAATGTTCACAGATTTGTGGATGTCTTGAATGCCTAT
GGCATAACTTCTGATATAATCAATATCGTGGAGATGGATGTCTGATCCAAATGTAAGTTA
GATACTGAACTTCAGAATTCTTATGTATTACTAATTACTATATCTCGTACTTATCTTACA
GAAAACAGTGAAATGATTGTGTAAGTTGAAAATGAGAACGTTGAACTCCCTGCAAATGTT
TGTGTTGTTTTGATGCTCAAACCAAAGATTTCTACTCTAAACATTTCTCTAAGCTTAAAA
ATGCATCGTAGACTATGCAGTGAAGTGGTAAATATTCAATCTCACTCTCATATTGCCTAG
CTATGTAGTTTTTAGTTACTTTCTGCTGCCCTCAATCTTTTATATTTGCTATTCTGGTTC
CCAAACTGCCTGGCTATTGCAATAAGTGGTGTCCTTATTTTAAATGTCCAGTTTAGCACA
CACTCTTCTCCCTGCTTGCATATATTGCCCACTTCTGCTGCTACTTATCAGTTCCTTCTA
GAATTGTGGACTTCTGGGTTCGATTTGCTTTGTGCATGCTGCTTTTACTCACTAGATGCT
TTACACTCAACATGGTGTTTGTTCTGATTAACTATTTTCGTACTGCTTTGAGGTACTATT
GTTTTGTTCATCTGATGGCGGCGATATTTGCCACTAAAAAAATCTTCACCATTCACTAAT
CCTAGAGATCAGCATATCTTCAGTAGATGCATGGTTTCTGTAAACAGGTTTCCATTAAAC
AGCAAGTTTGAGACACTTTTGTTTTGGTAGATGTGAATCAGAGGAAATGTACAAATGGTG
TGATACCACACAGGGCTGCTTATGAAACATAAAATTTGTTCATGTTCTAGTTCATTAAAG
GAAGTTGCACGTTGGCCTAGGTGAAAGTGCCATATAGGAATGATACCTAAATCAAGAGGC
CTTCCAGTTAAGCCTAATTCGAGGGCCCTCCAATTAAGAAAAGGACAAGTCGGAACCAAA
AAAAAAAATTCCTCCAATGGAATAAATGAGAGGTGACGAGGGAAGTAAGAATGGAATCAA
GGAAGTAAGAATTGAAATAGAGATGTGTACAAATCAAACTTCTAAAATCCACACCTGAAG
CGCTCCGATGACTACCAACTCCGGTTCTGGGTTGGGGAGGGATCTTTGGCTTCTGGGTCT
AGAGGGATTCTTGGGGAGGCACACGGATTGACCGTGGTGGTGGAGTGTGTGTCAAACGGC
AGGTGATGGCTCTTGCGGTGATGGGCTGATGGCGCTGCCAAAGTCAAGCGAGAGGTGGTG
GCAGCGAGGGCATTAATGATGAGGCTTTGCATGCTGTGGTTTCTCGTGATTGCCAAAACC
AATGGGTGGCAGCAGCCATGGGGCCGGGGGCACTAGGACAGGATACTGAGTGGGGAGGGA
TGTTGATGCCAGGGAGACAAAGAAATAAGGTGCCTGGTGTGGGAGCAGGGAGGATATTTT
CTTTCTTTTTTACAGTGGTGGGCTCTCGAGCTATCCTTAGCTGGAGAGTGGTTCTTCTGT
AGTCGTTTCCTTTAGGAATTACAGCAAAGTTGTTCCCATCAATGATCCAAATTTCACTTT
GCAAAAAGACATGTATCCTGCAACCATTATTGGCCCAAAAACTTTTATCTACTGGTATTC
TGCGTGATGATTGTCTTTTTTTTTCCCCTTCAATTTAAATGCAAAAACAAAATTGATTGT
GTAATCATATGGCTAGTCTCTGCTAAGAGTCCCCACGTTGGATGCGTCCAATGCAAATTC
CTTTCTCAAAGAAATTGAATGTTTCTCTTTATATCATATCAAACCTATCAGTATTAATTG
TGCCTTTTCGTGTTTGTACAGGCATCGGTTTGAAGAGGCTAAAGGGTGATCTTGCTGTTG
ATGGATCAACCAGTCGTTAACCTCCAGGGAAAAAATGAGATGTGTCTTCTTTGTTGAACT
GAAAAAATGGCTGCCACAACGGAAAGGGAAGACTTCCAACTGTATGACTTTAGTGTGACC
TGCGCAGCTTGGACAACGATTGTGTGGGGTTTTAATTTCTAGGATAATTGGATGAATATT
TTGGGTTCCGTGGAAGGGATTTCCTGATATAAAGCACTCTTTTTTTTATACAGACGTGGC
TAATAACAAAGACGTGGCTGTAAACATGGGCTCGGTCCAATCCTAAACTATAGTTAATAC
CTTGTATTAGTATGCTATTGACATCTATCGCGTT