Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

OQU82813
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:5:2133800:2137983:1 gene:SORBI_3005G023800 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGCCAAATGCTCTATGTTCGTCAACATCTGATGTTTTTGAAGCTACTGCATATCTTGCT
TTGGAGGATTTCCTTCATGCAGGCATTAAAGGATTGTGGGAAACTTTCTGGGGCCCTGAT
GAGGCAATGCCTTCCTCAGTTGCCTGTATACACAGCTCAAGTTCCAAATTTTATCCTGCT
GAGAAGGCTATTAGCAGTGGCAAACTCGATGGTGTTTGTGCAACTTCTGTACTGCTGAAG
AATTTGAAGTATTCACAAGGAAGATGGGATGATATTGTTGTGTTGGCTTTGTTGAGACCT
GATATTGGAATGGTTTCCGCACAGGGTGACCAGGAGCCATCTTCTGCTGTCTTAGGGGAG
GCACTCTTCTTTGCTTTGCGTGTCCTACTGTCTCGAAGCCTTAGCAGATCCTCCACTGTT
CTTCACAATTCAGATTGTATTTATTTGCTTCTTGTTGATTCACAGTTTGGAAGAGTAGTA
AAGGTCCAAGGAGATTTGAACAAGCTGGATTTTGATCAGAACAATGTTTATTACTGTGCT
GCTGAATGGATAAAGAAGCATGCCAAGATTTCAGTTTCTTCTATAGATCGAGTATGGAAC
AAACTTGGGAATGCTAACTGGGGAGACATTGGGACCCTTCAAGTTCTCATGGCTATATTC
CTCTCAATGATCCAATTTTATGGAGAGCCTAAGTATTCTCTTGATGAACTTGCCACAGAA
CATAGTTCAAGGCTACAAAGTCGAAGGTCAGAAAGACATTTAGTTGACAGACAAGCTAAT
GGTCATGGTTTATTTCAGTTCCAACAGCCAAGTCATTCTCCTGAAATTGTCGAAGTACAT
GAGGAACCAGCTGTTGATGTGAAACCACAGGAAACCTTGAAGCTTGAAATAGGATCTGTT
GTATTGATGAATGATGCTTACATACAGAAAGGTTTTCAAATCAATGACATCCTAACAGAC
AGTGACCCTCCTATTTATACTTCTACTCCTGTAGAAGAACCTACCAAAACGTATCTACTG
TATGTAGGCTCCAGCCCGTCTCATTTGGAACCGGCATGGGACGATATGAATTCCTGGTAC
CAAGTGCAGAGGCAGACCAAAGTACTGTCTTTGATGAAGCAAAGAGGCATTTCTAGCAGA
TATATACCACATATGGCATCTTCTGGGCGGATCATCCATCCAGGCACATGCAATAAGCCT
AACTCAAATGGAAATTGTGACCATCCATGGTGCAGTACTCCAATTCTTGTCACCTCACCA
GTTGGTCAGACTGTTTCAAATCTGATACGGAATGGATTGTTCGGTGTTGAGGAGGCACTG
AGATGTTGCCATGATTGTTTATCCTCTCTTGCTGCAGCAGCATCTGCAGGAGTCCGTCAC
AGTGATATCCGGCCAGAGAATGTGATCCGTGTCAGTAATGGTTCAGGTGATCCATATTTT
GTGCTTATTGGATGGGGTCATGCTATCCTAGAAGATAGAGAACGACCTGTGATGAATCTG
TTCTTCTCATCTACGTTTGCGCTCCAGGAAGGCAAGCTATGTGCAGCATCTGATGCAGAA
AGTTTAATCTATCTACTATATTTCTCTTGCGGTGGAGTTTGCCCAGAGCTTGACTCGGTT
GAAAGTGCCCTTCAGTGGAGGGAGATATCGTGGTCGAGGAGAGTTATACAGCAGAAGTTG
GGCGACTTCTCAGCAGTGTTAAAAGCTTTTGCGGATTATGTTGACAGCCTTTGCGGAACC
TACCCAATGGACTATGACATATGGTTGAAAAGATTGCGAAGAACAATAAATGAAGATCAT
GGGAAGGAGGTCGACACATCATCATCAAGTTAA

Peptide Sequence

PEP ID

OQU82813
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:5:2133800:2137983:1 gene:SORBI_3005G023800 transcript:OQU82813 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MPNALCSSTSDVFEATAYLALEDFLHAGIKGLWETFWGPDEAMPSSVACIHSSSSKFYPA
EKAISSGKLDGVCATSVLLKNLKYSQGRWDDIVVLALLRPDIGMVSAQGDQEPSSAVLGE
ALFFALRVLLSRSLSRSSTVLHNSDCIYLLLVDSQFGRVVKVQGDLNKLDFDQNNVYYCA
AEWIKKHAKISVSSIDRVWNKLGNANWGDIGTLQVLMAIFLSMIQFYGEPKYSLDELATE
HSSRLQSRRSERHLVDRQANGHGLFQFQQPSHSPEIVEVHEEPAVDVKPQETLKLEIGSV
VLMNDAYIQKGFQINDILTDSDPPIYTSTPVEEPTKTYLLYVGSSPSHLEPAWDDMNSWY
QVQRQTKVLSLMKQRGISSRYIPHMASSGRIIHPGTCNKPNSNGNCDHPWCSTPILVTSP
VGQTVSNLIRNGLFGVEEALRCCHDCLSSLAAAASAGVRHSDIRPENVIRVSNGSGDPYF
VLIGWGHAILEDRERPVMNLFFSSTFALQEGKLCAASDAESLIYLLYFSCGGVCPELDSV
ESALQWREISWSRRVIQQKLGDFSAVLKAFADYVDSLCGTYPMDYDIWLKRLRRTINEDH
GKEVDTSSSS

Transcript Sequence

Transcript ID

OQU82813
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:5:2133800:2137983:1 gene:SORBI_3005G023800 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

AACTTGGATTCCTTCTTTGAGTAGATAGCTTTCCTTCATTCTAGATCTGCCGCGTGACCG
GATTTTTTCCCCTTCATTCTCTTAGTGGGTATATGGCGTTGGGATTTGGGAGAGGAGCAG
CCAAAGGTTCGATTTGGCATCGGCAAGTTATGGCTTCACACCCTTAGGATCCAAACCTTT
GGATTTAACTTCGAAAATGTGATGCTTGATTCAAGTCCAAGTCCTGTCCCTAGTTGAGTG
CTTGTGTGCTTGATATGGAGTGAAATTAAAATCCGCTTACATACTATATGGCCTTCCTGT
GAATGTATGTTTTGCTGATGATATGTATGCCTGTAGTATGCATATAAGATTAAGTTATTT
TAAGGTCAGGCCAATTCAACTTTAGCACTATCCGACTCTGTGAGTATCAAGTGTGCGATC
AGTAAACAAAATTGACATGGGTATTCTACAATGCAGAAAGGAAAGCAAGTACACTCCCAT
GGATTAGTTTCAAAATTATAGTACTGCATAAATTTCCATCCACGATTTCGCAGGCCACAA
GTGCAGTTGAACAATACCACAGTTTAGAATTCACCGCACATTCAGCCGCCTAAGTTTCTG
AGTTTTTGTGGAATACATAGCAGAAGTTGTTATCATATATTTTTGAAACGGTGAACATCT
TCATTTCCTTTGTAGCAGTGGCTACCATGGTAAAATCTTTAACACTGATAGACTATCAGG
TTTCACCGTTTCTTTTTGGGCGTTCAAATGCTGTGTTGACTATTGCCAATTGCTACTGAG
GTATTAGGAGCAATAACTGAGCAAGCACACATGGACATGATCATGTGGCACAATTTCCAC
AGAACAATCCATCTATTATTCGCTATGTTCTTGTAAAGTTTTCTAGAAGGAATGAAGGAT
AGGATGGGGGATTACTACATTTGGTTATACAGAATTCTGGTTTTTTCATAAATGAAGTTA
CTAGTCATATTTGGTTATTTCAGTAATTCTTGGGTTTCTGGTAATTATTGTTGTAAACTC
AGGTTGACTTGAGAAGTTTTTGTTAGTACGCCGGTGATCATTCTCTGATCCTAATTGCCC
TGAACATTAGGTTCATATTTAAGTTTCTATACTTTCTTTGACCTGTATGGACTTGTTGAT
CCATATTTAAATCATACCCATATATGACTGTACTCTTTTTGGCATGTAGGTATTGACTAA
ACCTAGTAGGCAATCTTTGTAAGGTAACTTGTAGGTGTCATTTTTTTCTTGTTAAGTTTT
GTTTCGTGCTAGATTTGCTATCTTCAGTACAATATTGTTTATATGCTACTTACTGTTTTT
ATTGCTCATCTTGGATCCTATAATTTCTCGAAGTCTTTATATTGAGTTACTTGAACATCC
ATTCCATACAAAACTTAACAATTAGTAACTGTGGGATTTGATGCCATTTTGCAGATCAAT
CACCTGACCATATATCAGTCGGTTCAGTGCCAAAAAAGTCTAGTACATCCTCACGAGGTC
GACGCCGTAATTTCTCATCATCAACATGCAAAGATTTTCTCCGGAAGTTTGTGGACAGTG
AACTTTTAACTTCAAGCCTTGAGGATTGGTTCTGTGGTCACTGTGAAGATTGTGGTTTCA
GGAAGCCAACTTTTGATGTTCCTTTCGACCTTACTGAATTACAGAATTTTGATTATGCTC
TGGAGGGTGTTACTTTTCAGCAGCTAGTAAGGATGCCAAATGCTCTATGTTCGTCAACAT
CTGATGTTTTTGAAGCTACTGCATATCTTGCTTTGGAGGATTTCCTTCATGCAGGCATTA
AAGGATTGTGGGAAACTTTCTGGGGCCCTGATGAGGCAATGCCTTCCTCAGTTGCCTGTA
TACACAGCTCAAGTTCCAAATTTTATCCTGCTGAGAAGGCTATTAGCAGTGGCAAACTCG
ATGGTGTTTGTGCAACTTCTGTACTGCTGAAGAATTTGAAGTATTCACAAGGAAGATGGG
ATGATATTGTTGTGTTGGCTTTGTTGAGACCTGATATTGGAATGGTTTCCGCACAGGGTG
ACCAGGAGCCATCTTCTGCTGTCTTAGGGGAGGCACTCTTCTTTGCTTTGCGTGTCCTAC
TGTCTCGAAGCCTTAGCAGATCCTCCACTGTTCTTCACAATTCAGATTGTATTTATTTGC
TTCTTGTTGATTCACAGTTTGGAAGAGTAGTAAAGGTCCAAGGAGATTTGAACAAGCTGG
ATTTTGATCAGAACAATGTTTATTACTGTGCTGCTGAATGGATAAAGAAGCATGCCAAGA
TTTCAGTTTCTTCTATAGATCGAGTATGGAACAAACTTGGGAATGCTAACTGGGGAGACA
TTGGGACCCTTCAAGTTCTCATGGCTATATTCCTCTCAATGATCCAATTTTATGGAGAGC
CTAAGTATTCTCTTGATGAACTTGCCACAGAACATAGTTCAAGGCTACAAAGTCGAAGGT
CAGAAAGACATTTAGTTGACAGACAAGCTAATGGTCATGGTTTATTTCAGTTCCAACAGC
CAAGTCATTCTCCTGAAATTGTCGAAGTACATGAGGAACCAGCTGTTGATGTGAAACCAC
AGGAAACCTTGAAGCTTGAAATAGGATCTGTTGTATTGATGAATGATGCTTACATACAGA
AAGGTTTTCAAATCAATGACATCCTAACAGACAGTGACCCTCCTATTTATACTTCTACTC
CTGTAGAAGAACCTACCAAAACGTATCTACTGTATGTAGGCTCCAGCCCGTCTCATTTGG
AACCGGCATGGGACGATATGAATTCCTGGTACCAAGTGCAGAGGCAGACCAAAGTACTGT
CTTTGATGAAGCAAAGAGGCATTTCTAGCAGATATATACCACATATGGCATCTTCTGGGC
GGATCATCCATCCAGGCACATGCAATAAGCCTAACTCAAATGGAAATTGTGACCATCCAT
GGTGCAGTACTCCAATTCTTGTCACCTCACCAGTTGGTCAGACTGTTTCAAATCTGATAC
GGAATGGATTGTTCGGTGTTGAGGAGGCACTGAGATGTTGCCATGATTGTTTATCCTCTC
TTGCTGCAGCAGCATCTGCAGGAGTCCGTCACAGTGATATCCGGCCAGAGAATGTGATCC
GTGTCAGTAATGGTTCAGGTGATCCATATTTTGTGCTTATTGGATGGGGTCATGCTATCC
TAGAAGATAGAGAACGACCTGTGATGAATCTGTTCTTCTCATCTACGTTTGCGCTCCAGG
AAGGCAAGCTATGTGCAGCATCTGATGCAGAAAGTTTAATCTATCTACTATATTTCTCTT
GCGGTGGAGTTTGCCCAGAGCTTGACTCGGTTGAAAGTGCCCTTCAGTGGAGGGAGATAT
CGTGGTCGAGGAGAGTTATACAGCAGAAGTTGGGCGACTTCTCAGCAGTGTTAAAAGCTT
TTGCGGATTATGTTGACAGCCTTTGCGGAACCTACCCAATGGACTATGACATATGGTTGA
AAAGATTGCGAAGAACAATAAATGAAGATCATGGGAAGGAGGTCGACACATCATCATCAA
GTTAATACTACGGAACATTTTTCTTGCAAAATCCAGAATGCGGAGGATCAAGAGTGATCA
ATCCATTACTTTTTGTTGTTGTAGATAATTTTTTTGTGAAAGGCTTTCCATAGGTCATAG
TGTTCATCGTCTCGCACCATTCCTTTGCCCCTTTGATAAGGGTATTTCAAAAATTGCAAT
CTGCTGCTGCTATCCTCAATGCGATCACTGTCACTGTTTACTATTCTGTGCTCCCACCTT
CAGCGGTTCACAGAGGAGTGCAGTATATAGATCCTTGAGGATATCAGCAACATGATGTAT
TTTGTAAATGGTCTTTGGTAAATTGGTTAGCCTCTGCTCTGGTTGCCCTCTGGGATTCTG
GTCCCATTTTATTTGGTGCTGTGCAAGGCTAGGCTTGTGGATGTTAACTGGTAGGAAAAT
ATGGACCTCGAGTGTGTGGTATAGTCGATTAATTTTTGGCACTTCCTGTTTGTAACTGCT
CCAAAATAGATATGCGGTTAGTGGTGGTGTGGCATAGTAGCATTTATTTTTTTAAGAAGG
CTAAATTATTTGTTGGGTGCAATGTTAATTGTTAAAGGTCCTATAAATGATGTTCTATTG
ATTGAGATGCCCAAACTCCTGACTGGTGTTCTGGATCTCGGTAT