Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

OQU82718
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:5:1119704:1124965:-1 gene:SORBI_3005G012200 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGTCGGTGACACGGCGGTGCGGCGGACGGCGGCGGCCGGAGAGGGCGGCGGGGGTACTG
GGCGACAACGGATACGTCGAGACTGACCCCACCGGCCGCTATGGACGGTTCGACGAGCTC
CTGGGCAAAGGCGCCATGAAGTCGGTGTACCGTGGCTTCGACGAGGAGCGGGGCGTGGAG
GTTGCGTGGAACCAGGCGAGCCTCGCCGACGTGCTCCGGTCGCCGGACGCCGTGCAGCGG
ATGTACTCGGAGGTGCAGCTGCTGAGCTCGCTCCGGCACGACGGCATCATCGGCTTCCAC
GCGTCGTGGGTGGACGTCGCCGGCCGCAGCTTCAACTTCATCACCGAGCTCTTCTCCTCC
GGCACGCTCCGCTCCTACCGCCTCCGCTACCCTCGCGTCAGCCTCCGCGCCGTCCGGTCG
TGGGCGCGGCAGCTGCTCGCCGGCCTCGCCTACCTCCACGCGCGCGACCCGCCGGTGATC
CACCGCGACCTCAAGTGCGACAACATCTTCGTCAACGGCCACCAGGGCCAGGTCAAGATC
GGCGACCTCGGCCTCGCCGCCGTGCTCGGCCGCCGCGGCGGCGCCGCCCACAGCGTCATC
GGCACGCCTGAGTTCATGGCGCCCGAGATGTACGACGAGGAGTACGACGAGAGGGTGGAC
GTGTACGCCTTCGGGATGTGCATGCTGGAGATGCTCACCGTCGAGTACCCTTACAGCGAG
TGCTCCAACCCGGCGCAGATCTACAAGAAGGTCACCGCCGGCAGGCTCCCCGACGCGTTC
TACCGGATCGACGACGACGACGCGCGCAGGTTCATTGGACGCTGCCTCGTCCCCGCCGCC
AACCGCCCCTCCGCCGCCGAGCTGCTGCTCGACCCTTTCCTCCTCGACCGCCACCATGTT
GTTGCTGCTGCTGCTGGCACGGTGCCATCATCAGTGCCGCCGCCACCGTCGTTGCCAGCT
GCTGTTGCCGCCGCCGGCGCTCCGCCGCCCTCGACGTGTAGCAGCTCCGCCGACGATGTC
GTCTCGGCGTCGTCGTCGTCGTTGGACGATGACGAGGGCGAGCATCATCACGAGCCGCCA
CAACATCCGCCACCGCCGCCGAGGAGTGAGATGACCATCACCGGGAAGCTGAACGCGGAG
GAGGACACCATCTTCCTGAAAGTACAGATCGCCGACGAGGCGACAGGGCACGCGCGCAAC
ATCTACTTCCCGTTCGACATGGCGAGCGACACGGCGGCGGAGGTGGCGCAGGAGATGGTG
AAGGAGCTGGACATCACGGACCGGGACGCGTCGGAGATCGCCGCCATGATCCAGCAGGAG
ATCGGCAGGCTGCTGCCGGGGCGAGCGCAGCAGCAGCAGCAGCAGCACGAGTACACGTAC
GCGGGACGTGACGACGACGACGAAAACGACGAGGAGCGGCCTCCCCCCTTCTGCTGCTAC
CTCTCCTCGTCTCCCGCCTCCTCCCATGGCTCTCACTGCGGAGTGGGGCCCTACGGCTTC
CCTGGCCAACGTGGCGGTGGCTGGTCCAAAGATCATCATCACTGGTACGCTTTAAGCGAC
AACGACGATGACATGAGCTCCGTGCACTCCGGTAAGTACTCTCCTCTCCATTACGCCTCA
GGTGCCGACGAGGCGGAGGAGCCCATGCCCACCTGCTGCACCGGCACCGGCTCGTCCAAG
ACAAGGTTCGGCGGCGGCGGCGGCGGGGGCAGCAGCTCCGCCGCCGCGCAGCTCGCGCGG
CAGCTGCAGCGGCAGTGCAGCATGTCGGTGTCGCCGCAGCACGCGGGGCGGCCGCGGCGG
CGGGAGGACGACGACGACGGGACCGGGACCAGCCGGCGGAGGAGGATGACGCGGAACCGG
TCGATGGTGGACATGCGGAGCCAGCTGCTGCACCGGACGCTGGTGGAGGAGCTCAACCGC
CGCCTCTTCTTCAACACCGTCGGCGCCGTCGAGAACATCGGCTTCCGCGCGCCCACCACC
ACCTCGCCCTCCGCCTCGTCGTCGTCGGTGTCCGCGGCGGCGCGTGGGCGTGGCGGCCTC
GACCACCGCGGCAGGAGAGGCGGCGGCAACGGCAACGGCAACGGCAAGCAGCAGCTGGAC
GATAAGCAGCAGTACTTCATGCTTTAG

Peptide Sequence

PEP ID

OQU82718
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:5:1119704:1124965:-1 gene:SORBI_3005G012200 transcript:OQU82718 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MSVTRRCGGRRRPERAAGVLGDNGYVETDPTGRYGRFDELLGKGAMKSVYRGFDEERGVE
VAWNQASLADVLRSPDAVQRMYSEVQLLSSLRHDGIIGFHASWVDVAGRSFNFITELFSS
GTLRSYRLRYPRVSLRAVRSWARQLLAGLAYLHARDPPVIHRDLKCDNIFVNGHQGQVKI
GDLGLAAVLGRRGGAAHSVIGTPEFMAPEMYDEEYDERVDVYAFGMCMLEMLTVEYPYSE
CSNPAQIYKKVTAGRLPDAFYRIDDDDARRFIGRCLVPAANRPSAAELLLDPFLLDRHHV
VAAAAGTVPSSVPPPPSLPAAVAAAGAPPPSTCSSSADDVVSASSSSLDDDEGEHHHEPP
QHPPPPPRSEMTITGKLNAEEDTIFLKVQIADEATGHARNIYFPFDMASDTAAEVAQEMV
KELDITDRDASEIAAMIQQEIGRLLPGRAQQQQQQHEYTYAGRDDDDENDEERPPPFCCY
LSSSPASSHGSHCGVGPYGFPGQRGGGWSKDHHHWYALSDNDDDMSSVHSGKYSPLHYAS
GADEAEEPMPTCCTGTGSSKTRFGGGGGGGSSSAAAQLARQLQRQCSMSVSPQHAGRPRR
REDDDDGTGTSRRRRMTRNRSMVDMRSQLLHRTLVEELNRRLFFNTVGAVENIGFRAPTT
TSPSASSSSVSAAARGRGGLDHRGRRGGGNGNGNGKQQLDDKQQYFML

Transcript Sequence

Transcript ID

OQU82718
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:5:1119704:1124965:-1 gene:SORBI_3005G012200 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGTCGGTGACACGGCGGTGCGGCGGACGGCGGCGGCCGGAGAGGGCGGCGGGGGTACTG
GGCGACAACGGATACGTCGAGACTGACCCCACCGGCCGCTATGGACGGTTCGACGAGCTC
CTGGGCAAAGGCGCCATGAAGTCGGTGTACCGTGGCTTCGACGAGGAGCGGGGCGTGGAG
GTTGCGTGGAACCAGGCGAGCCTCGCCGACGTGCTCCGGTCGCCGGACGCCGTGCAGCGG
ATGTACTCGGAGGTGCAGCTGCTGAGCTCGCTCCGGCACGACGGCATCATCGGCTTCCAC
GCGTCGTGGGTGGACGTCGCCGGCCGCAGCTTCAACTTCATCACCGAGCTCTTCTCCTCC
GGCACGCTCCGCTCCTACCGCCTCCGCTACCCTCGCGTCAGCCTCCGCGCCGTCCGGTCG
TGGGCGCGGCAGCTGCTCGCCGGCCTCGCCTACCTCCACGCGCGCGACCCGCCGGTGATC
CACCGCGACCTCAAGTGCGACAACATCTTCGTCAACGGCCACCAGGGCCAGGTCAAGATC
GGCGACCTCGGCCTCGCCGCCGTGCTCGGCCGCCGCGGCGGCGCCGCCCACAGCGTCATC
GGCACGCCTGAGTTCATGGCGCCCGAGATGTACGACGAGGAGTACGACGAGAGGGTGGAC
GTGTACGCCTTCGGGATGTGCATGCTGGAGATGCTCACCGTCGAGTACCCTTACAGCGAG
TGCTCCAACCCGGCGCAGATCTACAAGAAGGTCACCGCCGGCAGGCTCCCCGACGCGTTC
TACCGGATCGACGACGACGACGCGCGCAGGTTCATTGGACGCTGCCTCGTCCCCGCCGCC
AACCGCCCCTCCGCCGCCGAGCTGCTGCTCGACCCTTTCCTCCTCGACCGCCACCATGTT
GTTGCTGCTGCTGCTGGCACGGTGCCATCATCAGTGCCGCCGCCACCGTCGTTGCCAGCT
GCTGTTGCCGCCGCCGGCGCTCCGCCGCCCTCGACGTGTAGCAGCTCCGCCGACGATGTC
GTCTCGGCGTCGTCGTCGTCGTTGGACGATGACGAGGGCGAGCATCATCACGAGCCGCCA
CAACATCCGCCACCGCCGCCGAGGAGTGAGATGACCATCACCGGGAAGCTGAACGCGGAG
GAGGACACCATCTTCCTGAAAGTACAGATCGCCGACGAGGCGACAGGGCACGCGCGCAAC
ATCTACTTCCCGTTCGACATGGCGAGCGACACGGCGGCGGAGGTGGCGCAGGAGATGGTG
AAGGAGCTGGACATCACGGACCGGGACGCGTCGGAGATCGCCGCCATGATCCAGCAGGAG
ATCGGCAGGCTGCTGCCGGGGCGAGCGCAGCAGCAGCAGCAGCAGCACGAGTACACGTAC
GCGGGACGTGACGACGACGACGAAAACGACGAGGAGCGGCCTCCCCCCTTCTGCTGCTAC
CTCTCCTCGTCTCCCGCCTCCTCCCATGGCTCTCACTGCGGAGTGGGGCCCTACGGCTTC
CCTGGCCAACGTGGCGGTGGCTGGTCCAAAGATCATCATCACTGGTACGCTTTAAGCGAC
AACGACGATGACATGAGCTCCGTGCACTCCGGTAAGTACTCTCCTCTCCATTACGCCTCA
GGTGCCGACGAGGCGGAGGAGCCCATGCCCACCTGCTGCACCGGCACCGGCTCGTCCAAG
ACAAGGTTCGGCGGCGGCGGCGGCGGGGGCAGCAGCTCCGCCGCCGCGCAGCTCGCGCGG
CAGCTGCAGCGGCAGTGCAGCATGTCGGTGTCGCCGCAGCACGCGGGGCGGCCGCGGCGG
CGGGAGGACGACGACGACGGGACCGGGACCAGCCGGCGGAGGAGGATGACGCGGAACCGG
TCGATGGTGGACATGCGGAGCCAGCTGCTGCACCGGACGCTGGTGGAGGAGCTCAACCGC
CGCCTCTTCTTCAACACCGTCGGCGCCGTCGAGAACATCGGCTTCCGCGCGCCCACCACC
ACCTCGCCCTCCGCCTCGTCGTCGTCGGTGTCCGCGGCGGCGCGTGGGCGTGGCGGCCTC
GACCACCGCGGCAGGAGAGGCGGCGGCAACGGCAACGGCAACGGCAAGCAGCAGCTGGAC
GATAAGCAGCAGTACTTCATGCTTTAG