Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

OQU82623
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:6:60690692:60698422:-1 gene:SORBI_3006G276100 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGACGATGACACCGAGGGCGTGGGCGAGAGCACCTGCCCCCCCGCCGCCGCCGACCGA
GGAACCTCCTCCTCGGCCGGCGGCGGCGGCGGCGGCGGCTCGCACGGTTACACTGACATC
GCCAAGGAGGTCTTCGACCGTCTCCTGGAGAAGGGAAACCCGGAGGTCGTCGCGGACCCG
CCGGCCTTCCTCGAACTGCTCTACCGCCACTTCGAGCGCCTGCCGCTGAGCTACGCCATC
GATGTGAACGTCGAGAAGGCCGAGGACGTGCTGCTGCACCGGACAATTCTCAACGAGTGC
GCCGACCCTGAAAAGCGCCCCATCTTCCATGTCCGCTTCTTGCACTGTGCCTCGACCTCG
GCGGATTCACATGATAACACGGAGGGCCTCCCTACGAGTGAAAACGGTAATTGTGGGGGT
TCTCAGGCTTCCACTTTGAGAGAATCTGAGCCTAGAGAATTTGAGCCATGCGAAGGGATG
GAGGACCTCAGTTTAACTAGAAAAAAAGTTGTGGAGGATGACTTTGAGGCCAGTTCTGAG
AGGAAAGGCGTAGAAATCCTCCATATCCATGAAATTATTTTTTCTACCATTGACAAGCCA
AAGCTCCTCGCTCAGCTATCTGCTTTGCTGTCTGAAGTTGGACTGAACATCCGTGAAGCT
CATGTCTTCTCAACAACTGATGGCTTTTGTTTGGATGTATTTGTTGTTGATGGCTGGGAT
ACAGAGGAGACAGATACTTTGCTACAGATTCTCAAGGAGACAGCGGCACGAAATCATGCC
TCATTATCAAACCCAACAAATTCTGCAGCCTCGCAAAGAATACTGGAACTGCAAGATCAG
ATTGGTGATTCAAATGTTGACAGGAGTTTCCTGCAGATTGGGGAGAAGATTGCATCTGGA
TCCTCCGGGGACTTGTATCGAGGAACTTATCAAGGTGTGGATGTTGCAGTGAAGTTCCTC
AGAACCGAACATGTTAATGACTCGTCAAAAGTGGAGTTTTTACAAGAAATAATTATTCTA
AAGAGTGTTAATCATGAAAATGTTGTTCGATTCTATGGGGCATGCACAAAGCAGAGACAA
TATGTCATTGTAACAGAGTATATGCCTGGAGGTAATCTATATGATTTTCTTCACAAGCTA
AATAACACATTGGATCTCACAAAGGTTCTTAGGATTGCTATTGGCATCTCCAAGGGAATG
GATTATTTGCACCAAAATAACATCATCCATCGAGACTTGAAGACTGCCAATTTGCTGATG
GGTTCTGACTATGTTGTGAAGATTGCAGACTTTGGAGTCTCAAGGAATCCGTCTCAAGGG
GGAGACATGACTGCTGAAACTGGTACCTACAGATGGATGGCACCTGAGGTAATAAACCAT
AAGCCGTATGATCACAGGGCAGACATCTTCAGCTTTGCTGTCGTTCTGTGGGAGCTGGTC
ACTTCAAAGATACCATACGAGAATCTGACACCCTTGCAAGCTGCACTGGGAGTAAGGGAC
TGCGGTTGGAGATCCCACCATTGGTCCATCCGCAACTGTCTAAACTGA

Peptide Sequence

PEP ID

OQU82623
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:6:60690692:60698422:-1 gene:SORBI_3006G276100 transcript:OQU82623 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MDDDTEGVGESTCPPAAADRGTSSSAGGGGGGGSHGYTDIAKEVFDRLLEKGNPEVVADP
PAFLELLYRHFERLPLSYAIDVNVEKAEDVLLHRTILNECADPEKRPIFHVRFLHCASTS
ADSHDNTEGLPTSENGNCGGSQASTLRESEPREFEPCEGMEDLSLTRKKVVEDDFEASSE
RKGVEILHIHEIIFSTIDKPKLLAQLSALLSEVGLNIREAHVFSTTDGFCLDVFVVDGWD
TEETDTLLQILKETAARNHASLSNPTNSAASQRILELQDQIGDSNVDRSFLQIGEKIASG
SSGDLYRGTYQGVDVAVKFLRTEHVNDSSKVEFLQEIIILKSVNHENVVRFYGACTKQRQ
YVIVTEYMPGGNLYDFLHKLNNTLDLTKVLRIAIGISKGMDYLHQNNIIHRDLKTANLLM
GSDYVVKIADFGVSRNPSQGGDMTAETGTYRWMAPEVINHKPYDHRADIFSFAVVLWELV
TSKIPYENLTPLQAALGVRDCGWRSHHWSIRNCLN

Transcript Sequence

Transcript ID

OQU82623
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:6:60690692:60698422:-1 gene:SORBI_3006G276100 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ACCACACCACATCCACACCGGCCTGATCCTCCGCGGAGACCAGCCGCCGCCCGATCCTCC
GGTGCCGCATCTCCGCCGTCCATCCATCATGCTCTGGTCGACCGCCTCTCCGGCTAGCCG
GAAAGCTGTTTTCGAATCGGATAGAGAAGGAGGATGGGGCTCTCCCTCCGCCGCCGGCAG
CACCACTCCCGGCGCAGCGGATTCGATCCAGGACAACCAGCCAATTTCCCTTCCTTCCAT
CACCCAACCCACCCACCTCGGCGCGCCGGCTCCTGTCTCGCCGGCGACGTCACCGGCAAG
TACCAAACTGCCCCTGCCTGTGCCTCCCGCGCTGCGTCGCCTCTTCTTCTACCTATAAAT
ACGGGTCGGGCGCCTTCCTCCACAAGATTCTGCCAAAAAGATCCCCTTGGATTCCCACGC
CCGCCCGCGCATTTCGCCGGTCGCCATCGGCCTCTCTCTCTCTTTCTCTATCTCGTCGCC
GCCGCCGCTGCATCCCCCGCCCCGGTGCTAAATCCAGGACGCGGCTGGCGGGCGTTTCTA
TGGCCGAGCCGTAGGTGGAGGCGGCACTTCGGCGCCGCGGGAGATGGACGATGACACCGA
GGGCGTGGGCGAGAGCACCTGCCCCCCCGCCGCCGCCGACCGAGGAACCTCCTCCTCGGC
CGGCGGCGGCGGCGGCGGCGGCTCGCACGGTTACACTGACATCGCCAAGGAGGTCTTCGA
CCGTCTCCTGGAGAAGGGAAACCCGGAGGTCGTCGCGGACCCGCCGGCCTTCCTCGAACT
GCTCTACCGCCACTTCGAGCGCCTGCCGCTGAGCTACGCCATCGATGTGAACGTCGAGAA
GGCCGAGGACGTGCTGCTGCACCGGACAATTCTCAACGAGTGCGCCGACCCTGAAAAGCG
CCCCATCTTCCATGTCCGCTTCTTGCACTGTGCCTCGACCTCGGCGGATTCACATGATAA
CACGGAGGGCCTCCCTACGAGTGAAAACGGTAATTGTGGGGGTTCTCAGGCTTCCACTTT
GAGAGAATCTGAGCCTAGAGAATTTGAGCCATGCGAAGGGATGGAGGACCTCAGTTTAAC
TAGAAAAAAAGTTGTGGAGGATGACTTTGAGGCCAGTTCTGAGAGGAAAGGCGTAGAAAT
CCTCCATATCCATGAAATTATTTTTTCTACCATTGACAAGCCAAAGCTCCTCGCTCAGCT
ATCTGCTTTGCTGTCTGAAGTTGGACTGAACATCCGTGAAGCTCATGTCTTCTCAACAAC
TGATGGCTTTTGTTTGGATGTATTTGTTGTTGATGGCTGGGATACAGAGGAGACAGATAC
TTTGCTACAGATTCTCAAGGAGACAGCGGCACGAAATCATGCCTCATTATCAAACCCAAC
AAATTCTGCAGCCTCGCAAAGAATACTGGAACTGCAAGATCAGATTGGTGATTCAAATGT
TGACAGGAGTTTCCTGCAGATTGGGGAGAAGATTGCATCTGGATCCTCCGGGGACTTGTA
TCGAGGAACTTATCAAGGTGTGGATGTTGCAGTGAAGTTCCTCAGAACCGAACATGTTAA
TGACTCGTCAAAAGTGGAGTTTTTACAAGAAATAATTATTCTAAAGAGTGTTAATCATGA
AAATGTTGTTCGATTCTATGGGGCATGCACAAAGCAGAGACAATATGTCATTGTAACAGA
GTATATGCCTGGAGGTAATCTATATGATTTTCTTCACAAGCTAAATAACACATTGGATCT
CACAAAGGTTCTTAGGATTGCTATTGGCATCTCCAAGGGAATGGATTATTTGCACCAAAA
TAACATCATCCATCGAGACTTGAAGACTGCCAATTTGCTGATGGGTTCTGACTATGTTGT
GAAGATTGCAGACTTTGGAGTCTCAAGGAATCCGTCTCAAGGGGGAGACATGACTGCTGA
AACTGGTACCTACAGATGGATGGCACCTGAGGTAATAAACCATAAGCCGTATGATCACAG
GGCAGACATCTTCAGCTTTGCTGTCGTTCTGTGGGAGCTGGTCACTTCAAAGATACCATA
CGAGAATCTGACACCCTTGCAAGCTGCACTGGGAGTAAGGGACTGCGGTTGGAGATCCCA
CCATTGGTCCATCCGCAACTGTCTAAACTGATCCAACGGTGCTGGGATGAAGATCCTAAC
CTGCGCCCCTCCTTCTCAGAGATCACTGTAGAGCTGGAAGGCATGTTACGGCATCATCAG
GTAAGATTGACATTCTTCCCCCCTAGCCGTACGTTTGCTATGCTGCACAATGGCGATAAA
TGGCTTGTGCTATATTGTTTGCCTGATGAAAATCTGCATACATTTTAGGCCTCTAAGGGA
AGCAACAAACATTCGAAGGCAAAGGTGCACAAAAAATCACAGAGATAGATAGATAGATAG
AATAACAAGGTTGTCAGTAAGCTTGTGCAACAGCTTAGAGGAGCTTGGTTATCATAATCC
AAGATTCTGTGGCTACTACGCTGCAGCTACGGTACGGCGGTTGGTCGCTACGAAGATGCT
GCTAGTGTAGAATGATTTTTGTACAATTGTCACATATGTATATGTGGGGTGCTTGCCTAT
GTTTTTTTTTTTTCTGCCCGATTGGTGTGTGTTTCTATTACTCCCAAAAATAGTATATAC
GGGAGAAAGTGTCGACAATACAGCAGGACAAGCAAAGACACACGGTATCGTTGTATAAAA
TAGTTTGCAACCAGCATAAAATGCCCTTTAGTTTTTGTATACGAGACAAAGGAAATGTAT
GTTTTGACTGTTTTGCATGA