Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

OQU82496
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:6:58950477:58955549:-1 gene:SORBI_3006G250800 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGATGTCAAGGGCCTTTTTGCATGGGAGGGTTTATAATGGTCCAAGCACCTCCTACATG
CTGGGAAGAGCAAATGAGAGCTTACACTGGAGCACTGGTGTGAGGAAGTTCTCAATTCTT
TCATCCTGTAGCCAGAATGCATTTCAGAGTCAACTTGCTTGGAAGCGACTTGTGGCCATG
GGTTCTCGTGCACCAAAAGCATCTCCATTTTTGAGTAGGGTTGCTTGTGCCATTGGCTTG
GCTGTGAGTAGGTCTAATGTAGCTCCTTACCTCGTCGCTTTCATTGCGGGAGAGGTAATG
CTAGCTCAGAAGACATCTGCAGATGGCGAATACTACCCAATACGTGAGCGAGCTCAGGAT
GGCCGTATTTATGTTACCTCTCTAATATATTCGGCAGTAGAGCTGGTTATTATAATCTTC
AGATCAATATATTTGGCATTGCTGTTCACTCCGAGTATACTGATGGCCCCATTTGCAGAG
ACTCTTGGCAGTAAGTATAGGAAAACATGGCTTCGGCTTGTCCATCGTACTTTGGAGCTT
GCAGGTCCTGCGTTTATCAAATGGGGCCAATGGGCTGCAACACGCCCTGATCTGTTTCCA
AGTGACCTTTGTACTGAATTGTCAAAGCTGCACACAAAAGCACCAGCTCACAGCTTTAAG
TATACCAAGAAAACTGTTGAGAAAGCTTTTGGTCGTAAGCTATCAGACATTTTTGAGAAT
TTTGAAGAGAACCCTGTTGCATCTGGAAGTGTTGCTCAAGTGCATCGGGCTGTTTTACGA
TTCCGGTATCCTAATCAGCAGACAAAGCGTGTAACAGTTGCAGTAAAAGTAAGACATCCT
GGTGTAGGAGACTCGATAAGAAGGGATTTCAATATCATCAATGCCGTAGCAAAAATTTCT
AGATACATCCCCACGCTGAATTGGTTGCGCTTAGATGAGAGTGTACAACAGTTTGCTGTC
TTCATGATGTCTCAAGTTGACCTTGCACGGGAAGCTGCTCACCTGAGCCGGTTTATCTAC
AACTTCCGAAGGTGGAAGGATGTATCTTTCCCAAGACCTCTTTATCCACTTGTTCATCCT
GCTGTTTTGGTCGAGACTTACGAGCATGGGGAGAGTGTTTCACACTATGTTGATGACCTT
GAGGGGCATGATCGAATTAAAAGTGCTCTGGCCCATATTGGCACTCATGCGCTCTTGAAA
ATGCTACTGGTTGATAATTTCGTCCATGCAGATATGCACCCAGGAAATATTTTAGTCCGT
GTTGTACAACCAAAGAACTCAAATAACACCCTTATAAAGTCAAGGCCACATGTAGTCTTC
CTGGATGTAGGAATGACTGCTGAACTTTCAAGTAATGACCGTGTGAATTTACTCGAGTTC
TTCAAGGCTGTTGCTCGCCGAGATGGTCGTACAGCTGCAGAAAGTACTCTAAAGTTGTCA
AAACAACAGAATTGCCCAAATCCAAGTGCTTTTATTGAGGAAGTGGAACGATCATTCTCT
TTTTGGGGCACTGCTGAAGGTGATGTTGTCCACCCAGCTGAGTGTATGCACCAGCTGCTT
GAGCAAGTTCGACGTCACAAAGTGAATATCGATGGCAATGTTTGTACTGTCATGGTGACT
ACATTAGTTCTTGAGGGCTGGCAACGCAAGTTGGACCCAGATTATAATGTTATGAAGACA
CTACAAACCTTACTTTTCAAGGAAGACTGGGCAAAGTCTCTTCAATACACGATCCAAGGG
CTCATGGCGCCTTAG

Peptide Sequence

PEP ID

OQU82496
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:6:58950477:58955549:-1 gene:SORBI_3006G250800 transcript:OQU82496 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MMSRAFLHGRVYNGPSTSYMLGRANESLHWSTGVRKFSILSSCSQNAFQSQLAWKRLVAM
GSRAPKASPFLSRVACAIGLAVSRSNVAPYLVAFIAGEVMLAQKTSADGEYYPIRERAQD
GRIYVTSLIYSAVELVIIIFRSIYLALLFTPSILMAPFAETLGSKYRKTWLRLVHRTLEL
AGPAFIKWGQWAATRPDLFPSDLCTELSKLHTKAPAHSFKYTKKTVEKAFGRKLSDIFEN
FEENPVASGSVAQVHRAVLRFRYPNQQTKRVTVAVKVRHPGVGDSIRRDFNIINAVAKIS
RYIPTLNWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPRPLYPLVHP
AVLVETYEHGESVSHYVDDLEGHDRIKSALAHIGTHALLKMLLVDNFVHADMHPGNILVR
VVQPKNSNNTLIKSRPHVVFLDVGMTAELSSNDRVNLLEFFKAVARRDGRTAAESTLKLS
KQQNCPNPSAFIEEVERSFSFWGTAEGDVVHPAECMHQLLEQVRRHKVNIDGNVCTVMVT
TLVLEGWQRKLDPDYNVMKTLQTLLFKEDWAKSLQYTIQGLMAP

Transcript Sequence

Transcript ID

OQU82496
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:6:58950477:58955549:-1 gene:SORBI_3006G250800 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

TTTTCCGCGTAAGACTGGGATGGGCCGATATGGGCTTATTTTGTGGTCCACTTCGGGCGC
TGCATGCAACGCGGACGATTAGTGCCCACTCAGTCGAACGGTCGACGCGCGGCTGCGAAC
GGCCCAGGGCTGGCCCGGCCCGCGGTAGACCACAAGCCAGGCGCATAGCTCTGTTTCAAC
CTCACAGCGTCGTCCTCTGCTTCGCAAGCGCCCGAGCCGCGCGCCGCCGCCTCCCCCAGC
CTCCGGGCACACCGGAGCACGCCAGCCAGTCACACCCCGACACAGCGGCACCGGAGGAAC
CCCTCCTTCTTGGTGGTAGCCGCCGTGGCCTCCCTCCCCTCATCCTTCCGGTGTTGGATT
GAGGGTGGAGCGGAGATCCGCCACGGCTTGGATTGATCTCTGGTTGGTAAGGAACCCTAG
CTTGCTTGGGTGGATTCTTCTGAGCGCGAATTCGATTCAGCGATGTGTTTCAAATGCTCT
TTCCCATCGAATCGAAATATTCCCTTGTCAGCATCAGTTAGTAGGGGATTTTGCTGCTGC
GCAGTGCAGCGCTTATCTAATCCATCCGTCGATGCTTTGATTAGGCCCTTCCTCCTACGC
ACGATCGAGCCCAGTCAAGTCGACGCCATAGAGAACTTGGGATTCTAAGGTGCTGGTGCA
GCTTCTTCTCGCAGGAGTTTAACCTCCATGCCCCTCGCTAAGCCCACCCCTGTGATCCCG
CCGTGACGCATCATCCTCAGGAGAAACGCCATGATGTCAAGGGCCTTTTTGCATGGGAGG
GTTTATAATGGTCCAAGCACCTCCTACATGCTGGGAAGAGCAAATGAGAGCTTACACTGG
AGCACTGGTGTGAGGAAGTTCTCAATTCTTTCATCCTGTAGCCAGAATGCATTTCAGAGT
CAACTTGCTTGGAAGCGACTTGTGGCCATGGGTTCTCGTGCACCAAAAGCATCTCCATTT
TTGAGTAGGGTTGCTTGTGCCATTGGCTTGGCTGTGAGTAGGTCTAATGTAGCTCCTTAC
CTCGTCGCTTTCATTGCGGGAGAGGTAATGCTAGCTCAGAAGACATCTGCAGATGGCGAA
TACTACCCAATACGTGAGCGAGCTCAGGATGGCCGTATTTATGTTACCTCTCTAATATAT
TCGGCAGTAGAGCTGGTTATTATAATCTTCAGATCAATATATTTGGCATTGCTGTTCACT
CCGAGTATACTGATGGCCCCATTTGCAGAGACTCTTGGCAGTAAGTATAGGAAAACATGG
CTTCGGCTTGTCCATCGTACTTTGGAGCTTGCAGGTCCTGCGTTTATCAAATGGGGCCAA
TGGGCTGCAACACGCCCTGATCTGTTTCCAAGTGACCTTTGTACTGAATTGTCAAAGCTG
CACACAAAAGCACCAGCTCACAGCTTTAAGTATACCAAGAAAACTGTTGAGAAAGCTTTT
GGTCGTAAGCTATCAGACATTTTTGAGAATTTTGAAGAGAACCCTGTTGCATCTGGAAGT
GTTGCTCAAGTGCATCGGGCTGTTTTACGATTCCGGTATCCTAATCAGCAGACAAAGCGT
GTAACAGTTGCAGTAAAAGTAAGACATCCTGGTGTAGGAGACTCGATAAGAAGGGATTTC
AATATCATCAATGCCGTAGCAAAAATTTCTAGATACATCCCCACGCTGAATTGGTTGCGC
TTAGATGAGAGTGTACAACAGTTTGCTGTCTTCATGATGTCTCAAGTTGACCTTGCACGG
GAAGCTGCTCACCTGAGCCGGTTTATCTACAACTTCCGAAGGTGGAAGGATGTATCTTTC
CCAAGACCTCTTTATCCACTTGTTCATCCTGCTGTTTTGGTCGAGACTTACGAGCATGGG
GAGAGTGTTTCACACTATGTTGATGACCTTGAGGGGCATGATCGAATTAAAAGTGCTCTG
GCCCATATTGGCACTCATGCGCTCTTGAAAATGCTACTGGTTGATAATTTCGTCCATGCA
GATATGCACCCAGGAAATATTTTAGTCCGTGTTGTACAACCAAAGAACTCAAATAACACC
CTTATAAAGTCAAGGCCACATGTAGTCTTCCTGGATGTAGGAATGACTGCTGAACTTTCA
AGTAATGACCGTGTGAATTTACTCGAGTTCTTCAAGGCTGTTGCTCGCCGAGATGGTCGT
ACAGCTGCAGAAAGTACTCTAAAGTTGTCAAAACAACAGAATTGCCCAAATCCAAGTGCT
TTTATTGAGGAAGTGGAACGATCATTCTCTTTTTGGGGCACTGCTGAAGGTGATGTTGTC
CACCCAGCTGAGTGTATGCACCAGCTGCTTGAGCAAGTTCGACGTCACAAAGTGAATATC
GATGGCAATGTTTGTACTGTCATGGTGACTACATTAGTTCTTGAGGGCTGGCAACGCAAG
TTGGACCCAGATTATAATGTTATGAAGACACTACAAACCTTACTTTTCAAGGAAGACTGG
GCAAAGTCTCTTCAATACACGATCCAAGGGCTCATGGCGCCTTAGGGTCTGTGCTGCAAT
CCTCTCAAAAGTTTTGATCTGGTTTGTGTTCGGCTGGAGGATCCTCTGCTCTCACCATCA
CGTTTCTTTTCTTCTCTACTTTATTTGCTCTTAGATTATACAGTTCTTTGTACTCGTCCT
GGCCTTGTGCTGCTAAAGCAGCCTTGATGATAAAGTAATAATAACAGCAAATTTTCAGAA
GCTACCAGAGTACTATGCTGTAGAGTGCATTGCTTCTCATATGTTCTCGATGGGCCAAAG
GATTAGGTCCTTTTTCCCCCTCCCAACACTTTTGACAATAGCTCTTAGATGATGTAGCAA
AAGGTGTTTTGTTCTGATGATCTTTTTTTGTAACTGGAGAGATTGTATAAGTGAACAAGA
GAGTTGCTTATGTACACACAGATACTTGAAGAAACCTACTTCTCAACTGACAATTCCCAG
GATTAACGTCCATAAAGAGGCTCCCAATTTTTCTTGTTTTACATGTATTAGCATCGCAGA
ATGCCTGAAGTTTGAATGAGTTTGCTGGTAGGGACTTCGTTTACAGTCAGCTTTGCATTT
GAGTTGACATGTCAGCTCTGCATTTGAGTTGACATGCTATCCTGTTGTATAGACCAAGTG
CCTGATTTGCTGGTAGGGAACTATATTGGATTTCGTTTACAGTCATTTTCTAATTTGAGT
TGACATTT