Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

OQU82423
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:6:57699327:57707150:1 gene:SORBI_3006G235400 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGCTTCTCCTCCAGCCCCGCGCAGTCCCTGCGCCTGCTCTGCGGGGGAGGCCTCCTCGG
CCACGCCGGCGGCTGGTGCCGCCTCCCCTCGCCTCGGCGTCTGGTTCCATCGTCGTCAGC
TCCGACGAGGACGCCTTCACCAGGTGCTCCGGGTACCTGTTCGAGGAGGGCGCGGCCACC
GAGTCGGAGCTCCCCACCGCGTACGACCTCCCCGGCATCGCGGCCGTGTACCGCCGCCGC
CCGCTCCTCGTGCTCCGCCGCTCCCTGCAGATCGGCACGTCCTTTGGTCGGTGGTTCGCG
CTGCGGTACCTCGACCGCGTCAACGAGCGCGCGGACGACATGTTCGAGCTTCGGGCGGCT
CAGCTCAGGAGGATACTGTTAGAGCTTGGCCCGGCATTTGTGAAGATCGCGCAAGCAGTT
TCGTCGCGGCCGGATGTTGTTCCACCTGCATACCTTGATCAGCTCTCACTACTTCAGGAC
CGCATAGCACCATTTTCAAACGATGTTGCTTTTAACATTATAGAGAAAGAGCTTGGGCTG
CCACTGGATATGATTTTCTCTGAGATAACACCAGAGCCTGTTGCTGCTGCATCTCTTGGA
CAGGTTTACCAGGCTAGGCTCCGCTCCAATGGTAAGGTTGTTGCTGTCAAAGTACAAAGA
CCTGGAGTTCAAGCAGCAATTTCATTAGACATATATATCTTGAGGTTCCTAGCTAGTATT
GCAAGGAAGGCTGCCAAGTTGAACACAGACCTTCCAGCTGTGCTTGATGAATGGGCATCA
AGCCTATTTCGGGAGATGGATTATAGAGAAGAAGCAAGAAATGGACTTAAGTTCAGAGAA
TTGTTTGGGAAATTTAGAGATGTCTCAGTTCCCGAAATGTATCTGGAGCAGACTAGAAGG
CGAGTCCTTGTCATGGAATGGATCGAGGGGGAAAAGTTGTCAGAAGTCAGAGATCAGTAT
TTGGTTGAGGTTGGAGTATATTGTTCGCTTTCCCAGCTATTAGAATATGGATTTTACCAT
GCAGATCCACACCCCGGAAATCTTTTGCGTACAGTTGATGGGAAATTAGCCTACTTAGAT
TTTGGGATGATGGGAGAATTCCGACAAGACCTACGTGATGGATTTATTGAAGCTTGTCTT
CATCTTGTTAACCGTGATTTTGATGCTTTAGCAAAAGATTTTGTAACCCTTGGTTTACTT
CCTCCAACTGCCCAGAAGGGTGAAGTCACAAAGGCATTGACAGGTGTATTTGAGAATGCT
GTTAACAGAGGAGTTCAGAATATAAGCTTTGGAGATCTGTCAGGAAATCTTGGACGAACA
ATGTATAAATTCAAGTTCCAGATACCTTCTTACTTTTCCCTTGTAATCCGAAGCCTTGCT
GTTTTAGAAGGTATCGCAATCAGCTTCAATCCAAACTATAAAGTTTTGGGCAGTTCATAT
CCATGGATTGCAAGAAAAGTTCTCACTGACAGTTCACCAAAGCTTCGATCAACTTTGCAG
ACTCTTCTTTACAAGGATGGCACTTTCCAAATTGATCGCCTGGAATCTTTGTTAACTGAG
TCACTTCGTGCCAGAACAGAGCAATCACTGGTCAGAAATCAACAAGAAGATGTTGACAGT
ACGAGATATGCAATTAAGCAAGTCTTGTCATTCACACTCGCTGACCAGGGTGCCTTTGTG
AAGGATTTACTTCTTCAGGAGATTGCTAAGGGAATAGATGCACTTGGTGTAGCCACATTA
AGCTCTGCAACGTCTGCAGCAGCCTCCAGATTGCCATTCGCTGGTGTCCCATCCCCATTG
ACCTCACTAGACGATGAGGATGCCACCAACTTAAGAAATCTGTATCGCCTGCTCCTACTT
TTATCTAAGGTTTCTCAGAAGGGAAACCCATCTCCGAGCCCTGGATATAACAGTGCCATA
GAGAAGGAAGGTGGTAGCACGGATGAACTTTCTCTTGCGCTGTATGAAATGTCCTCTCTG
CCAGAATTTCTTCCAGTTCTTTCTGTCATTCCTGAGCTTCCACCGGAGTCCCAACAGCAG
TTGCTTCTTCTGCCAGCGGATTTAACCAATCGTATTTTATCTCGGGCTGTCGCGAGAACC
ATTAGAAGACTGTTCATGTAA

Peptide Sequence

PEP ID

OQU82423
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:6:57699327:57707150:1 gene:SORBI_3006G235400 transcript:OQU82423 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MLLLQPRAVPAPALRGRPPRPRRRLVPPPLASASGSIVVSSDEDAFTRCSGYLFEEGAAT
ESELPTAYDLPGIAAVYRRRPLLVLRRSLQIGTSFGRWFALRYLDRVNERADDMFELRAA
QLRRILLELGPAFVKIAQAVSSRPDVVPPAYLDQLSLLQDRIAPFSNDVAFNIIEKELGL
PLDMIFSEITPEPVAAASLGQVYQARLRSNGKVVAVKVQRPGVQAAISLDIYILRFLASI
ARKAAKLNTDLPAVLDEWASSLFREMDYREEARNGLKFRELFGKFRDVSVPEMYLEQTRR
RVLVMEWIEGEKLSEVRDQYLVEVGVYCSLSQLLEYGFYHADPHPGNLLRTVDGKLAYLD
FGMMGEFRQDLRDGFIEACLHLVNRDFDALAKDFVTLGLLPPTAQKGEVTKALTGVFENA
VNRGVQNISFGDLSGNLGRTMYKFKFQIPSYFSLVIRSLAVLEGIAISFNPNYKVLGSSY
PWIARKVLTDSSPKLRSTLQTLLYKDGTFQIDRLESLLTESLRARTEQSLVRNQQEDVDS
TRYAIKQVLSFTLADQGAFVKDLLLQEIAKGIDALGVATLSSATSAAASRLPFAGVPSPL
TSLDDEDATNLRNLYRLLLLLSKVSQKGNPSPSPGYNSAIEKEGGSTDELSLALYEMSSL
PEFLPVLSVIPELPPESQQQLLLLPADLTNRILSRAVARTIRRLFM

Transcript Sequence

Transcript ID

OQU82423
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:6:57699327:57707150:1 gene:SORBI_3006G235400 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ACCTCCTGCGCGGCTGCGCTCCCGGCGTGCTTTCCGTTGCGACACGCGCTCCAGAAGATC
CGAGCCGCGCGTTTGGAGGTGGAGTTTGCCCCGAAAAATGCTGAGCCACAAAAAATCATG
CCGTTACAAACACTACTACTCGCTTTGGCGCCTATCCCATCCGTTTCTCCAGTTTCGTCT
TCCCCGCTCGCCCCAACCTCCTATCAAAATCTCCGTTCCCAATTCGAATCCCCCAGATCC
TATCCTCGGCATCGGCAGGAGTCCAGATGCTTCTCCTCCAGCCCCGCGCAGTCCCTGCGC
CTGCTCTGCGGGGGAGGCCTCCTCGGCCACGCCGGCGGCTGGTGCCGCCTCCCCTCGCCT
CGGCGTCTGGTTCCATCGTCGTCAGCTCCGACGAGGACGCCTTCACCAGGTGCTCCGGGT
ACCTGTTCGAGGAGGGCGCGGCCACCGAGTCGGAGCTCCCCACCGCGTACGACCTCCCCG
GCATCGCGGCCGTGTACCGCCGCCGCCCGCTCCTCGTGCTCCGCCGCTCCCTGCAGATCG
GCACGTCCTTTGGTCGGTGGTTCGCGCTGCGGTACCTCGACCGCGTCAACGAGCGCGCGG
ACGACATGTTCGAGCTTCGGGCGGCTCAGCTCAGGAGGATACTGTTAGAGCTTGGCCCGG
CATTTGTGAAGATCGCGCAAGCAGTTTCGTCGCGGCCGGATGTTGTTCCACCTGCATACC
TTGATCAGCTCTCACTACTTCAGGACCGCATAGCACCATTTTCAAACGATGTTGCTTTTA
ACATTATAGAGAAAGAGCTTGGGCTGCCACTGGATATGATTTTCTCTGAGATAACACCAG
AGCCTGTTGCTGCTGCATCTCTTGGACAGGTTTACCAGGCTAGGCTCCGCTCCAATGGTA
AGGTTGTTGCTGTCAAAGTACAAAGACCTGGAGTTCAAGCAGCAATTTCATTAGACATAT
ATATCTTGAGGTTCCTAGCTAGTATTGCAAGGAAGGCTGCCAAGTTGAACACAGACCTTC
CAGCTGTGCTTGATGAATGGGCATCAAGCCTATTTCGGGAGATGGATTATAGAGAAGAAG
CAAGAAATGGACTTAAGTTCAGAGAATTGTTTGGGAAATTTAGAGATGTCTCAGTTCCCG
AAATGTATCTGGAGCAGACTAGAAGGCGAGTCCTTGTCATGGAATGGATCGAGGGGGAAA
AGTTGTCAGAAGTCAGAGATCAGTATTTGGTTGAGGTTGGAGTATATTGTTCGCTTTCCC
AGCTATTAGAATATGGATTTTACCATGCAGATCCACACCCCGGAAATCTTTTGCGTACAG
TTGATGGGAAATTAGCCTACTTAGATTTTGGGATGATGGGAGAATTCCGACAAGACCTAC
GTGATGGATTTATTGAAGCTTGTCTTCATCTTGTTAACCGTGATTTTGATGCTTTAGCAA
AAGATTTTGTAACCCTTGGTTTACTTCCTCCAACTGCCCAGAAGGGTGAAGTCACAAAGG
CATTGACAGGTGTATTTGAGAATGCTGTTAACAGAGGAGTTCAGAATATAAGCTTTGGAG
ATCTGTCAGGAAATCTTGGACGAACAATGTATAAATTCAAGTTCCAGATACCTTCTTACT
TTTCCCTTGTAATCCGAAGCCTTGCTGTTTTAGAAGGTATCGCAATCAGCTTCAATCCAA
ACTATAAAGTTTTGGGCAGTTCATATCCATGGATTGCAAGAAAAGTTCTCACTGACAGTT
CACCAAAGCTTCGATCAACTTTGCAGACTCTTCTTTACAAGGATGGCACTTTCCAAATTG
ATCGCCTGGAATCTTTGTTAACTGAGTCACTTCGTGCCAGAACAGAGCAATCACTGGTCA
GAAATCAACAAGAAGATGTTGACAGTACGAGATATGCAATTAAGCAAGTCTTGTCATTCA
CACTCGCTGACCAGGGTGCCTTTGTGAAGGATTTACTTCTTCAGGAGATTGCTAAGGGAA
TAGATGCACTTGGTGTAGCCACATTAAGCTCTGCAACGTCTGCAGCAGCCTCCAGATTGC
CATTCGCTGGTGTCCCATCCCCATTGACCTCACTAGACGATGAGGATGCCACCAACTTAA
GAAATCTGTATCGCCTGCTCCTACTTTTATCTAAGGTTTCTCAGAAGGGAAACCCATCTC
CGAGCCCTGGATATAACAGTGCCATAGAGAAGGAAGGTGGTAGCACGGATGAACTTTCTC
TTGCGCTGTATGAAATGTCCTCTCTGCCAGAATTTCTTCCAGTTCTTTCTGTCATTCCTG
AGCTTCCACCGGAGTCCCAACAGCAGTTGCTTCTTCTGCCAGCGGATTTAACCAATCGTA
TTTTATCTCGGGCTGTCGCGAGAACCATTAGAAGACTGTTCATGTAAAGCCAAAGGTACA
GAAATTTTCCGTCCCTGCTTCCTTAATTTTCTTTAACTATTCTTTTTGGTTCACTACTAG
AAGATAAGGAGGATTTTTTTCTCTCTCCACTCCATATGGTAGCATCTAATCTAGAACCCA
AGATCAATCTTTTTTTTTGTTCTTTACGGAATGCTTTGAAACACTGCTATGTACATATTT
TTCAAACTACAACAGGCATTGTAAATGGCCCATGTTGCTATGCACATATGGTGTAACTGA
CAAACTTAATCTATGTGAACATAAAAATAATGCTGTAATGCATT