Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

OQU82414
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:6:57561938:57564813:-1 gene:SORBI_3006G233800 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGCTCCGGCTGTGACAATCACCGACGTCGCCTACGTCGCTGCGCCGGATGGCGCGCTG
CCGCCGGAGCCTGTCATCAAGCTCAACGCCATGGAGGCGCAGTGGGTCGTGATTCCCCTG
CTACAGCACCTCCTGCTCTTCGACGGCGACCATCTGCCGCCATTCGACGCCATCCTCCAG
TCCCTCCGCTCCTCCCTCGCGGCGACCCTGGCCACCCACGCCCCGCTAGCCGGCAAGCTC
CACTACCTCGCGGACACCGGCGACGTCGCCATCTGCCGCTCCACCGGCGGCGGCGACGAC
GACGACGACGACCGCGGGGTCAGGTTCGTCGCCGCGGAGTGCGACGCCGACGCCCGCCGC
CTCGCGGGCGACGAGGACCACGACGTGCACACGTTCGAGCGCCTCGTTCCGGAGCTCGAC
ATGAGCCTGCTGCCGGCGCCGGTGCTCGCCGTCCAGGCAACGCGTCTCGCAGGAGGCGGG
GTGGCCCTTGGGGTCAGCGTGCACCACGGCGTCGCCGACGGGCAATCGCTGTGGAGGTTC
ATCGAGGCGTGGGCCGCGGCGTGCCGCGGCGACGCGCCGCCCGCGCCGCCGGTTTTCGAC
CGCTCCCGTGTCAGCCTACCTGGCGGCGAGGAATTGGCCCGGAGCATCCTACGGAAGTAC
GTGCCAGATTTGCCAATGGCTAGACTGCCGGCAGGCATGCAAGAAGACCGCCTGCAGTTC
ACCCGCCGGACGTTCACCCTGGACACTAACGACACGAAGCGGCTGAAGCAGCGCATCGTC
AGCCTCGGCGAAGCGCACGGCGCGCCGCTGCGCCGCTCCCCGTCCAGCTTCGTCGCCGTC
GTCGCGCTGGCCTGGACGTGCTTCGTCCGCGGCAGGGGTTTGGCCGCGGACGACGAGGAC
GTGTTCCTGTTCTTCTTCGCCGACGCCCGCGACCGGCTTGACCCTCCGGCCGGGGCGGAC
TACTTCGGTGCCTGCCTGACCGGATGCCTGGTGAGGCTGCCCGCGCGGGAGCTCCACGGC
GAGGGGGCGCTGGCGACCGCGGCGTCGGCGGTGCAGGGAGCGATCGAGAAGATGGTGGAG
GACCCACTCGGTTGCCGTCCCGGGTGGGAGTTCTTTAGGTTCGCCGGCGAGCCAGGGCTT
CGGCTTGAACGGTTCATGAACGTGTCGGGTTCGCCGGGCTTCAGGGCGTACGAGGTCGCC
GACTTCGGGTGGGGGAGACCCAGGCGGACGGAGAACATCAGGATGAACCACGACGGGCAG
CTGGCACTGATGCGCGCCAGGGACGGCGACGGGGTGCAGGCGTCGGTGTCCATGCTCCAG
CAGAAGCACGTGGACGCTTTCAAATCTGAGTTCCTCAAGCTGCTCGGTTGA

Peptide Sequence

PEP ID

OQU82414
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:6:57561938:57564813:-1 gene:SORBI_3006G233800 transcript:OQU82414 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MAPAVTITDVAYVAAPDGALPPEPVIKLNAMEAQWVVIPLLQHLLLFDGDHLPPFDAILQ
SLRSSLAATLATHAPLAGKLHYLADTGDVAICRSTGGGDDDDDDRGVRFVAAECDADARR
LAGDEDHDVHTFERLVPELDMSLLPAPVLAVQATRLAGGGVALGVSVHHGVADGQSLWRF
IEAWAAACRGDAPPAPPVFDRSRVSLPGGEELARSILRKYVPDLPMARLPAGMQEDRLQF
TRRTFTLDTNDTKRLKQRIVSLGEAHGAPLRRSPSSFVAVVALAWTCFVRGRGLAADDED
VFLFFFADARDRLDPPAGADYFGACLTGCLVRLPARELHGEGALATAASAVQGAIEKMVE
DPLGCRPGWEFFRFAGEPGLRLERFMNVSGSPGFRAYEVADFGWGRPRRTENIRMNHDGQ
LALMRARDGDGVQASVSMLQQKHVDAFKSEFLKLLG

Transcript Sequence

Transcript ID

OQU82414
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:6:57561938:57564813:-1 gene:SORBI_3006G233800 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

CTTACAATCAATCTACCGCTTCTAGATTGCCGGATTACCTTTAAGCCTGCTGATGATGGG
GATAGATTAACCTTATCCCCACTCTCATCCATGGGTAAAAGAATATTTTGGTGCTCGTGT
GGAGACTAACTCTCACATCCACCGGCGCCGGCAGCGTGATTGAGGAAAATCAATGTTTAA
GTACTAGAGACAGGTCCAAGTGGATCTCTCCTGAAGTCCTCTCCTGATCCCAGCCGGCCG
CCAGCGACCGGATGGACGCAACGTGACGCTAGCTGTCATTGATGGCCTTCTCGTATTAGC
TACTCCTCGCTCGAGGCTCGAGGCCAAAGCAAACACCACAAAGCTCTAATCCGGCACACT
TCTTGCTCAGGCAGCTAGTCAGGCACCGCCCACAACCAACATGGCTCCGGCTGTGACAAT
CACCGACGTCGCCTACGTCGCTGCGCCGGATGGCGCGCTGCCGCCGGAGCCTGTCATCAA
GCTCAACGCCATGGAGGCGCAGTGGGTCGTGATTCCCCTGCTACAGCACCTCCTGCTCTT
CGACGGCGACCATCTGCCGCCATTCGACGCCATCCTCCAGTCCCTCCGCTCCTCCCTCGC
GGCGACCCTGGCCACCCACGCCCCGCTAGCCGGCAAGCTCCACTACCTCGCGGACACCGG
CGACGTCGCCATCTGCCGCTCCACCGGCGGCGGCGACGACGACGACGACGACCGCGGGGT
CAGGTTCGTCGCCGCGGAGTGCGACGCCGACGCCCGCCGCCTCGCGGGCGACGAGGACCA
CGACGTGCACACGTTCGAGCGCCTCGTTCCGGAGCTCGACATGAGCCTGCTGCCGGCGCC
GGTGCTCGCCGTCCAGGCAACGCGTCTCGCAGGAGGCGGGGTGGCCCTTGGGGTCAGCGT
GCACCACGGCGTCGCCGACGGGCAATCGCTGTGGAGGTTCATCGAGGCGTGGGCCGCGGC
GTGCCGCGGCGACGCGCCGCCCGCGCCGCCGGTTTTCGACCGCTCCCGTGTCAGCCTACC
TGGCGGCGAGGAATTGGCCCGGAGCATCCTACGGAAGTACGTGCCAGATTTGCCAATGGC
TAGACTGCCGGCAGGCATGCAAGAAGACCGCCTGCAGTTCACCCGCCGGACGTTCACCCT
GGACACTAACGACACGAAGCGGCTGAAGCAGCGCATCGTCAGCCTCGGCGAAGCGCACGG
CGCGCCGCTGCGCCGCTCCCCGTCCAGCTTCGTCGCCGTCGTCGCGCTGGCCTGGACGTG
CTTCGTCCGCGGCAGGGGTTTGGCCGCGGACGACGAGGACGTGTTCCTGTTCTTCTTCGC
CGACGCCCGCGACCGGCTTGACCCTCCGGCCGGGGCGGACTACTTCGGTGCCTGCCTGAC
CGGATGCCTGGTGAGGCTGCCCGCGCGGGAGCTCCACGGCGAGGGGGCGCTGGCGACCGC
GGCGTCGGCGGTGCAGGGAGCGATCGAGAAGATGGTGGAGGACCCACTCGGTTGCCGTCC
CGGGTGGGAGTTCTTTAGGTTCGCCGGCGAGCCAGGGCTTCGGCTTGAACGGTTCATGAA
CGTGTCGGGTTCGCCGGGCTTCAGGGCGTACGAGGTCGCCGACTTCGGGTGGGGGAGACC
CAGGCGGACGGAGAACATCAGGATGAACCACGACGGGCAGCTGGCACTGATGCGCGCCAG
GGACGGCGACGGGGTGCAGGCGTCGGTGTCCATGCTCCAGCAGAAGCACGTGGACGCTTT
CAAATCTGAGTTCCTCAAGCTGCTCGGTTGATTTGTTGGTCTTGTAATTATACTTTGCAA
TAGCTTTTCAAGAGCTATGACGTCAATCTTTGCGACAACCATTGGAATATCAAACCTCTT
TGGCTGGCAGGTCTTCTCGCAAACCGCTTCACCTAAAAAACTAGAGAAGCCATTTTTTTC
CGACAAGGGGAGCTTCCCCATTCCCATTCAAAAGAACATAAGGCCTTATTTAGGCCTCCC
TATAAAATCTTTAGTTTTAGGTACTATAACATTTTCGTTTTTATTCGATAATTATTACTT
AATTATAGACTAATTAGTCAAATCCGGCGCGTACTTGCGCAGGATGCTCCTTGCCAGTTC
CTCGCCGCCGGGCAGGCTGACACGGGAGCGGTCGAACACCGGCGGCGCGGGCGGCGTGTC
GCCACGGCACGCGGCGGCCCACGCCTCGACGAACCTCCACAGCGAGCGGCCGTCGGCGAC
GCCGTGGTGCACACTGACCCCGAGGGCCACCCCGCCTCCAGTGAGACGCGTTGCCTGGAC
GGCGAGCACTGGCGCCGGCACCCGGCTCATGTCGAGCTCGATCTGGAACGAGGCGCTCGA
ACGTGAGCACGTCATGGTCCTCGTCGTCCGCGAGGCGGCGGGCGTCGGCGTCGCACTCCG
CGGCGACGAAGCTGACCCCACGGTCGTCGTCGCTGCCGCCGGTGGAGCGGCAGATGGCGA
CGTCGCCAGTGTCCACGAGGTAGTGGAGCTTGCCGGCAAGTGGGGCGTGGGTGGCCAGGG
TCGCCGCGAGGGAGGTCCGGAGGATGGCGTCGAACGGCGGCAGATGGTCGGCCTCGAAGA
TCAGGAGGTGCTGCAGCAGCGGAATCACCACCCACTGCGCCTCCATGGCGTTGAGCTTGA
TGATAGGCTCCGGCGGCAGCGCGCCATCCGGTGCAGCGACGTAGGCGACGTCCGTGATCG
TCACAACCGGAGCTATGTTGGTTGTGGGCGGTGTCAGACCGCCTGAGCAAGAACTATGCC
GGATTAGAGCTTAGCGTCTTTGTG