Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

OQU82408
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:6:57505272:57508428:1 gene:SORBI_3006G232700 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGCGGCGGCGACCAGGGTGATCGGATCCAAGCCATCGGACTGCTTCCAGTTCCAAGAC
CCTAGCACCTGGACTTGCATAACGGAGCTTGCAAGCGATGTGGTCGTCCAAGTAGGAGAC
ACGTCCTTCCACCTGCACAAGTTGATCAGCCATAGCGGCACGCTGAAGAAGCTTGTGAAC
GAGTCCACCGGCGACGACGACAGCAAACCGTGCACCGTGCGTCTGGACGACGTCCCCGGC
GGGGCGGAGGCGTTCCTGCTGGCGGTCAGGTTCTGCTACGACGTCGAGACGGAGCTGAAC
GCGGGCAACGTCGTGCCGCTGCGGTGCGCGGCGGAGCACCTCGCCATGACCGAGGACTAC
GGCGAAGGGAACCTGGTGCAGCAGGCGGAGTCGTTCCTGTCCGAGATGCTGGCCGGCTGG
GACGACACGGTGCGCGCGCTGAACGCGTGCGATGACGCCGTGCTCCCTGCCGCCGAGGAC
CTGCTCATCGTGCCTCGGTGCATCGACTCGCTGGCGGACAAGGCCTGCGCCGACCCGACG
CTCACCGGATGGCCGATGCTGCAGTATTTCACGGCGAAGAGCCTGGAGGAGACGGCGATA
TGGGACGGCATCGGCGCCGCCGGGAGGCCGCCGTCGCCGGGCCCGGACTGGTGGTACGAG
CAGGCGTCCTCGTTCGGCCTTCCCGTCTACAAGCGGCTCATCGCGGCGGTGCGGTCAAGG
GGCATGAGCCCCGAGAACGTCGCCGGCTCGCTGATGCACTACGCCAGGCGCCACCTCTCC
GGGGTCAGGCGGCGAGGAGACAACAGCGACGGCAGCAGCCGCGGCAGAGCCGGAGCGTCG
GGGACCGCGGCCGTGTTCTCGGCCGGCGATCAGAGGACCCTCCTGGAGGAGATTGTCGCG
CTGCTCCCTGTCGAGAAGAGCGTCACCCCGACGCGGTTCCTGCTCGGTCTGCTCCGCGTC
GCGACGGTCCTGCACGCCGCCGCGGCGTGCCGGGACGCGCTGGAGAGGAGGGCTGGCAAC
CAGCTCGAGGAGGCCGCGCTGGAGGACCTGCTGATACCCAACACCGGATACTCAGCGGAG
ACGCTGTACGACGTGGACAGCGTGCAGCGGATGCTGGAGCAGTTCATGGTGACGACCCCG
CCTGCGTTCGCCGCGTCGCCGGAGACCACGGACGAGGGACAGCTGGTCGACGCTCCGCCG
GCCGAGCTCAGGCCTGTCTGCTCGGTGGCCAAGCTAGTCGACGGGTACCTCGCGGAGGTC
GGGACGGACGCCAACCTCAAGCCCTCCAAGTTCCAGACCATCGCCGCGCTCGTCCCAGAC
TACGCCCGGGCAATCGACGACGGCCTCTACCGCGCCATTGACATCTACCTCAAGGCACAC
CCGTGGCTGACGGACTCGGAGCGGGAGCAGCTGTGCCGGCTGATGAACTGCCAGAAGCTG
TCGCTGGAGGCGTGCACGCACGCGGCGCAGAACGAGCGGCTGCCGCTGCGGGTAGTAGTG
CAGGTGCTCTTCTTCGAGCAGCTGCGGCTGCGCACCACGGTGTCCGGGTGGTTCTTCGCG
TCGGACAACGCCGACCAGGGCTCCAGCTCCGACAACTGCGTGCTGCAACGGAGGAGGTCC
GACAACGACCTGGACTTCGTCGCGGCCGGGTCACTGTCCGAGGTGACGACGGAAGAGGAC
GGCTTCGCGGCGGCCAGGCACGACGAGCCGTCGTCGCCTGCGATGAGCGTGGCGGAGATC
CACCGCCCGGGGAAGGGGAAGCCTAAGACTAAGAGCGCCCTGAGCCGGCTGTTAGGGAGG
CTCGGGCTCTGCGGGAGGTCGTCGTCGTCGCGGCAGCAGCTGCAGCCGCCGCCGCTGCCG
GGCGCCAGCGGCAAGAGGCGCAAGTCCTTCGATTTCGGGTGTTAA

Peptide Sequence

PEP ID

OQU82408
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:6:57505272:57508428:1 gene:SORBI_3006G232700 transcript:OQU82408 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MAAATRVIGSKPSDCFQFQDPSTWTCITELASDVVVQVGDTSFHLHKLISHSGTLKKLVN
ESTGDDDSKPCTVRLDDVPGGAEAFLLAVRFCYDVETELNAGNVVPLRCAAEHLAMTEDY
GEGNLVQQAESFLSEMLAGWDDTVRALNACDDAVLPAAEDLLIVPRCIDSLADKACADPT
LTGWPMLQYFTAKSLEETAIWDGIGAAGRPPSPGPDWWYEQASSFGLPVYKRLIAAVRSR
GMSPENVAGSLMHYARRHLSGVRRRGDNSDGSSRGRAGASGTAAVFSAGDQRTLLEEIVA
LLPVEKSVTPTRFLLGLLRVATVLHAAAACRDALERRAGNQLEEAALEDLLIPNTGYSAE
TLYDVDSVQRMLEQFMVTTPPAFAASPETTDEGQLVDAPPAELRPVCSVAKLVDGYLAEV
GTDANLKPSKFQTIAALVPDYARAIDDGLYRAIDIYLKAHPWLTDSEREQLCRLMNCQKL
SLEACTHAAQNERLPLRVVVQVLFFEQLRLRTTVSGWFFASDNADQGSSSDNCVLQRRRS
DNDLDFVAAGSLSEVTTEEDGFAAARHDEPSSPAMSVAEIHRPGKGKPKTKSALSRLLGR
LGLCGRSSSSRQQLQPPPLPGASGKRRKSFDFGC

Transcript Sequence

Transcript ID

OQU82408
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:6:57505272:57508428:1 gene:SORBI_3006G232700 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

GTTGCGAGTTGCGACGTCCTCCCAGCTCCCGCCCGCCCGAGTCACGTGGCGCCGGACCCG
GACGCGCGCGGCCGCCGATACTCGCCGGCCGGCCGGCCGGCCGACGGACCGAGACCACAC
GATAGGTTTGTCCTAGTACACTCACAGTTCTCGCGGGTTCTCGCTGTGCCCGGCCCAGCC
GCACATTGGGCGCGCCGCGTGATTTGATCCATCGATTCTTGCGCAGTTGCGGTTCCCGGA
TCGTCCGCGGGAAGAACCGGACGCCTAGTTCATGGCGGCGGCGACCAGGGTGATCGGATC
CAAGCCATCGGACTGCTTCCAGTTCCAAGACCCTAGCACCTGGACTTGCATAACGGAGCT
TGCAAGCGATGTGGTCGTCCAAGTAGGAGACACGTCCTTCCACCTGCACAAGTTGATCAG
CCATAGCGGCACGCTGAAGAAGCTTGTGAACGAGTCCACCGGCGACGACGACAGCAAACC
GTGCACCGTGCGTCTGGACGACGTCCCCGGCGGGGCGGAGGCGTTCCTGCTGGCGGTCAG
GTTCTGCTACGACGTCGAGACGGAGCTGAACGCGGGCAACGTCGTGCCGCTGCGGTGCGC
GGCGGAGCACCTCGCCATGACCGAGGACTACGGCGAAGGGAACCTGGTGCAGCAGGCGGA
GTCGTTCCTGTCCGAGATGCTGGCCGGCTGGGACGACACGGTGCGCGCGCTGAACGCGTG
CGATGACGCCGTGCTCCCTGCCGCCGAGGACCTGCTCATCGTGCCTCGGTGCATCGACTC
GCTGGCGGACAAGGCCTGCGCCGACCCGACGCTCACCGGATGGCCGATGCTGCAGTATTT
CACGGCGAAGAGCCTGGAGGAGACGGCGATATGGGACGGCATCGGCGCCGCCGGGAGGCC
GCCGTCGCCGGGCCCGGACTGGTGGTACGAGCAGGCGTCCTCGTTCGGCCTTCCCGTCTA
CAAGCGGCTCATCGCGGCGGTGCGGTCAAGGGGCATGAGCCCCGAGAACGTCGCCGGCTC
GCTGATGCACTACGCCAGGCGCCACCTCTCCGGGGTCAGGCGGCGAGGAGACAACAGCGA
CGGCAGCAGCCGCGGCAGAGCCGGAGCGTCGGGGACCGCGGCCGTGTTCTCGGCCGGCGA
TCAGAGGACCCTCCTGGAGGAGATTGTCGCGCTGCTCCCTGTCGAGAAGAGCGTCACCCC
GACGCGGTTCCTGCTCGGTCTGCTCCGCGTCGCGACGGTCCTGCACGCCGCCGCGGCGTG
CCGGGACGCGCTGGAGAGGAGGGCTGGCAACCAGCTCGAGGAGGCCGCGCTGGAGGACCT
GCTGATACCCAACACCGGATACTCAGCGGAGACGCTGTACGACGTGGACAGCGTGCAGCG
GATGCTGGAGCAGTTCATGGTGACGACCCCGCCTGCGTTCGCCGCGTCGCCGGAGACCAC
GGACGAGGGACAGCTGGTCGACGCTCCGCCGGCCGAGCTCAGGCCTGTCTGCTCGGTGGC
CAAGCTAGTCGACGGGTACCTCGCGGAGGTCGGGACGGACGCCAACCTCAAGCCCTCCAA
GTTCCAGACCATCGCCGCGCTCGTCCCAGACTACGCCCGGGCAATCGACGACGGCCTCTA
CCGCGCCATTGACATCTACCTCAAGGCACACCCGTGGCTGACGGACTCGGAGCGGGAGCA
GCTGTGCCGGCTGATGAACTGCCAGAAGCTGTCGCTGGAGGCGTGCACGCACGCGGCGCA
GAACGAGCGGCTGCCGCTGCGGGTAGTAGTGCAGGTGCTCTTCTTCGAGCAGCTGCGGCT
GCGCACCACGGTGTCCGGGTGGTTCTTCGCGTCGGACAACGCCGACCAGGGCTCCAGCTC
CGACAACTGCGTGCTGCAACGGAGGAGGTCCGACAACGACCTGGACTTCGTCGCGGCCGG
GTCACTGTCCGAGGTGACGACGGAAGAGGACGGCTTCGCGGCGGCCAGGCACGACGAGCC
GTCGTCGCCTGCGATGAGCGTGGCGGAGATCCACCGCCCGGGGAAGGGGAAGCCTAAGAC
TAAGAGCGCCCTGAGCCGGCTGTTAGGGAGGCTCGGGCTCTGCGGGAGGTCGTCGTCGTC
GCGGCAGCAGCTGCAGCCGCCGCCGCTGCCGGGCGCCAGCGGCAAGAGGCGCAAGTCCTT
CGATTTCGGGTGTTAATAAGTTGATAAGGGAAGGTTTAGGCGTGCGTTAATTAATTTGTT
TGAGATGTAGCAGTACTATCTGATGATGATATTACTCATAGGTACAAAGCTCATTGGTTC
ATTCTTTTCAGATTGTTTTGATGGAACGCAAGTTTTTTATTTAGAACGTTTGTAAATTTC
TTATCAGGTAGTTGAGATGCTTCCCAAGGTTCTTTCGTCCACTATGTATACGTAACTGTA
GGAGTAGGTTCCTACCATGA