Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

OQU82261
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:6:55552722:55556008:-1 gene:SORBI_3006G205800 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGCAATTTTGTATGCTGATTGCCGACCTTGCGCTGATCTTTCATCGGGCATTCGGGCTC
TTAGCAGCCGTCAGGACTCAGAATGATGGACGAATGAGTGGCCATGATGAGTACAAAAGC
GGTGGCAAACTCGATTCTGAATTTGACCACTACCAAATGATTCAGGTGAGCTTCCCAGCA
GACATGGATAGAGAAATCGTCGTAGCAGGGAACCATCACCACCTGATCGACATCGCACCG
GATGCGAGCATGGGCGCGCCCGCTGGCACGACGGACGGCGGCGAGGAGCAGGTAGGCACG
GGCTGCGGCGGTGGCGGAAACGAGAAGAAGTGGCTGCGCAAGCTCACGTCGGCTACGGTG
AACACGGCGGTGCTCCGAGACCTCATCTCGCGGACGCCCATGCTGTGGTACCTCGGCGAG
AGGACGGGAACGATCTTCCGGCCGTGCGCCCGGCGCGAGCCCGTGGAGGCGCTGCACGCG
GTGCGCGCCGTGGCCATCGGCCCGTTCCACCGCGCCGACCGCGGCCTCCCCTTCCCCGAC
GACGCCAAGCTCCCGTTCATGCGGTACCTGCAGGACCAGTGCGGCCTCGACGTGGACGGG
TACGTCGCGGCGCTCTCCCTGGAGCGCGACCGCCTCCGCGATGAGTTCGGCGCCGACGAC
GACTCGGACGCGGCCGCCGTGGAGATTCTGGACAACGAGGACAAGCTGTTGGAGATGCTG
CTGCTGGACAGCTGCTTCGTCCTGGTGGTGAGCTTGATGCTCAGCAAGACCGGCACAGGC
GACGCCGCCGACGGCGTGACGCGGGCGGCGTCCATCAGCAAGGACTACTTCATACTGCAC
ATGGCCGTGGGGCAGCACGCCGACGACATCAAGCTCGACATGCTCGTGCTCGAGAACCAG
GTCCCCTTCGGAGCCGTCAAGCTTCTCGCCGCGTCGTGCCCGGGGCTCAAGCTCCGGAGC
TCCGTCGAGGAGCTCGTGCTCGGATGCTTCGACGACATGTGCCCAAAGCGCGCGCGCCGC
GGCGGCGACAGCGTGGCCGCCGGCGGCGAGTTCCATCACGTCCTGCACCTCTTCCACTGG
TCCCGCGTGCCCAGGGACAAGTACTTCGTGCTCTCGACGCCACGGACGCAACTCAAGATC
AAGAAGGAATCGGAGCGGCTGTTCCCCTGCTCCATGGAGCTCCGGAGGTCAGCGGTGTGG
TTCCGCGAGGCGTCGTCGTGCTGCGGCGACCTGGACATGTGGTTCTGGCGGCACCCGGCG
AGCCCCGTGGCCGTGATGAGCGTCCCGTGCTTCCACGTCCACGAGTACAGCGCGGCGGTG
CTCCACAACCTCCTGGCCTTCGAGAAGCACTTCTACTGGGCGCACGGCGCGGGCGTGACG
GCGCACGTAGCGCGGATGGAGGGCCTGGTCCGTTGCCCGCAGGACGCGAGCATGCTCCGC
AAGCGAGGGGTCCTTGCCAGCACGCGGCGCACGGACACCGAGCTGGTGGCCCTGTTCCGG
GAGCTCGGCGAGGAGACCGTCGGGGCGCGGCTTCCTGACGAGTACGGCGAGATGCTTGAC
GCCGTGGCGTGGCACCGGGGCCGGCGTGTCAGCGGGTGGTGCGGGGGGTTCGTGCTGCAC
TTCTTCCCCTCGCCGTGGGTGGCCGTCTCGCTCGCCGCCGCTGCCGCGCTCATCTTCGTG
CCGTCGATGCTGCAGACAGTCTACACCATGTTCGGCTACTTCAATAGCAGCTGA

Peptide Sequence

PEP ID

OQU82261
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:6:55552722:55556008:-1 gene:SORBI_3006G205800 transcript:OQU82261 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MQFCMLIADLALIFHRAFGLLAAVRTQNDGRMSGHDEYKSGGKLDSEFDHYQMIQVSFPA
DMDREIVVAGNHHHLIDIAPDASMGAPAGTTDGGEEQVGTGCGGGGNEKKWLRKLTSATV
NTAVLRDLISRTPMLWYLGERTGTIFRPCARREPVEALHAVRAVAIGPFHRADRGLPFPD
DAKLPFMRYLQDQCGLDVDGYVAALSLERDRLRDEFGADDDSDAAAVEILDNEDKLLEML
LLDSCFVLVVSLMLSKTGTGDAADGVTRAASISKDYFILHMAVGQHADDIKLDMLVLENQ
VPFGAVKLLAASCPGLKLRSSVEELVLGCFDDMCPKRARRGGDSVAAGGEFHHVLHLFHW
SRVPRDKYFVLSTPRTQLKIKKESERLFPCSMELRRSAVWFREASSCCGDLDMWFWRHPA
SPVAVMSVPCFHVHEYSAAVLHNLLAFEKHFYWAHGAGVTAHVARMEGLVRCPQDASMLR
KRGVLASTRRTDTELVALFRELGEETVGARLPDEYGEMLDAVAWHRGRRVSGWCGGFVLH
FFPSPWVAVSLAAAAALIFVPSMLQTVYTMFGYFNSS

Transcript Sequence

Transcript ID

OQU82261
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:6:55552722:55556008:-1 gene:SORBI_3006G205800 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGCAATTTTGTATGCTGATTGCCGACCTTGCGCTGATCTTTCATCGGGCATTCGGGCTC
TTAGCAGCCGTCAGGACTCAGAATGATGGACGAATGAGTGGCCATGATGAGTACAAAAGC
GGTGGCAAACTCGATTCTGAATTTGACCACTACCAAATGATTCAGGTGAGCTTCCCAGCA
GACATGGATAGAGAAATCGTCGTAGCAGGGAACCATCACCACCTGATCGACATCGCACCG
GATGCGAGCATGGGCGCGCCCGCTGGCACGACGGACGGCGGCGAGGAGCAGGTAGGCACG
GGCTGCGGCGGTGGCGGAAACGAGAAGAAGTGGCTGCGCAAGCTCACGTCGGCTACGGTG
AACACGGCGGTGCTCCGAGACCTCATCTCGCGGACGCCCATGCTGTGGTACCTCGGCGAG
AGGACGGGAACGATCTTCCGGCCGTGCGCCCGGCGCGAGCCCGTGGAGGCGCTGCACGCG
GTGCGCGCCGTGGCCATCGGCCCGTTCCACCGCGCCGACCGCGGCCTCCCCTTCCCCGAC
GACGCCAAGCTCCCGTTCATGCGGTACCTGCAGGACCAGTGCGGCCTCGACGTGGACGGG
TACGTCGCGGCGCTCTCCCTGGAGCGCGACCGCCTCCGCGATGAGTTCGGCGCCGACGAC
GACTCGGACGCGGCCGCCGTGGAGATTCTGGACAACGAGGACAAGCTGTTGGAGATGCTG
CTGCTGGACAGCTGCTTCGTCCTGGTGGTGAGCTTGATGCTCAGCAAGACCGGCACAGGC
GACGCCGCCGACGGCGTGACGCGGGCGGCGTCCATCAGCAAGGACTACTTCATACTGCAC
ATGGCCGTGGGGCAGCACGCCGACGACATCAAGCTCGACATGCTCGTGCTCGAGAACCAG
GTCCCCTTCGGAGCCGTCAAGCTTCTCGCCGCGTCGTGCCCGGGGCTCAAGCTCCGGAGC
TCCGTCGAGGAGCTCGTGCTCGGATGCTTCGACGACATGTGCCCAAAGCGCGCGCGCCGC
GGCGGCGACAGCGTGGCCGCCGGCGGCGAGTTCCATCACGTCCTGCACCTCTTCCACTGG
TCCCGCGTGCCCAGGGACAAGTACTTCGTGCTCTCGACGCCACGGACGCAACTCAAGATC
AAGAAGGAATCGGAGCGGCTGTTCCCCTGCTCCATGGAGCTCCGGAGGTCAGCGGTGTGG
TTCCGCGAGGCGTCGTCGTGCTGCGGCGACCTGGACATGTGGTTCTGGCGGCACCCGGCG
AGCCCCGTGGCCGTGATGAGCGTCCCGTGCTTCCACGTCCACGAGTACAGCGCGGCGGTG
CTCCACAACCTCCTGGCCTTCGAGAAGCACTTCTACTGGGCGCACGGCGCGGGCGTGACG
GCGCACGTAGCGCGGATGGAGGGCCTGGTCCGTTGCCCGCAGGACGCGAGCATGCTCCGC
AAGCGAGGGGTCCTTGCCAGCACGCGGCGCACGGACACCGAGCTGGTGGCCCTGTTCCGG
GAGCTCGGCGAGGAGACCGTCGGGGCGCGGCTTCCTGACGAGTACGGCGAGATGCTTGAC
GCCGTGGCGTGGCACCGGGGCCGGCGTGTCAGCGGGTGGTGCGGGGGGTTCGTGCTGCAC
TTCTTCCCCTCGCCGTGGGTGGCCGTCTCGCTCGCCGCCGCTGCCGCGCTCATCTTCGTG
CCGTCGATGCTGCAGACAGTCTACACCATGTTCGGCTACTTCAATAGCAGCTGACAGCGT
CAAAATTAGGGTGCTAGAAGCAGAAACTCCTGTGACTCCTGATGTTTTTATTAGCACAAT
ATTAGATTTAATTTGAGCCACATGTCTTAAAATTAAGGCCACCTTTGGAATGCAGAAATT
TCACAAGAAATTCCACAGGAATCGGTTCGTTTTCACTGAGAAAAATGCAGGAAACAGAAA
AATTCTCTCCAATCCAAGGCCTGTAATTTTCTCACCACGGGCAGGAGCCTCTCTCACCCA
TACCCCAAGTGCTTATCTGTGGCCGCGGGGATCGACTTCTAGTTCCCGGGGAATGTGAGC
GGCGAGCCGTACGTGATGCACGCCAACGTGTTTGTGCAGGGGAGAGGTAACACAGAGAAG
GAGTTCTACTTCTGGTTTGATCCCACTGCGGATTTCCACACCATTCTCTGGAACCCACAC
AACATCATGTACGTGGCAAACCTTGCGCCTGCATTTCACTCTTTTTATATCTGCATGAAC
TATTTTTTATCTACTTGAACTATTGTTGTGGTTTAATTTTACTCCTCAAACCACTATTGT
TGTGGTTTATTTTACTACTCAAACCGTTATCTTAATCCTCCACTCTCAAAATCATCCAAA
TTACATCTTGTTGGGTTATAAGTATTTTCAAGGTGGATTCGTCGTTTTTATAGCTATTAA
TAGAATATGGTAAATAACCTATAAGTTTTTTAAAACCAATAAAATATCTCTAAGATCCTA
AAAATTCAAAAACAAAATCCTAGATTTTTGTTAGAATATGACAAACCAAAATAAAATAAT
TAGAGCTCATGAAAATATCTCCAGAACCTTCTAAAAATTAGATTTAGCACTAGAAAGTAT
AAAAAATATACTCCCTCTGTCAATAAAATAATACAGTCAATAAAATAATACAATTATGGG
ATCTGTACCACTCAAATTTGCTCAAGTTTGACCAAATTTATAGTAAATATTATTAGCATT
AAATTTATTATGAAAATATATACTATAACAAATCTAATGATACTTATTTTGTATAAAAGA
TGTTAGTATTGTTTTGTATGAATTTAGTCAAAGTTCAAATTGTTTGACTTCTCAAAAAGC
GAGAATTGTATTCTTTCCCAAAACATTCAAATCATACCTAAATGTGCTTTAAAATTTTTC
CACAACAAAACATGTGATGCAACAAGCAAGAATAAAAACATACGGTTAATGTTGAATGCA
TTGAACTATGAATTCATGATGGTAAAATCTTATGTTTTTGCCATGGAAAGTTTCCAAAAC
ATGTTTAGCATTGATTATAATGTTTTGAGAATCTTTTGGATTAGATTTTTCCCATTTTCT
TTTCGCCAAATCTAGTTTTGGATGCTTTTAGAGGTACTTCCAGTTTTTTCTATCTCAATA
TATCTGTAGAATTTTTCATGGAATCTTTAGAAGCTTACAAACATTTTTTTCATGGTTTTA
GGACCTTATCAAATATTTTCTTCATCTCAGAGTAAATGACGTTTTAGCCTTGGACACGAT
AATTTAGGATGACTGAAAAAGTTGCAATGCACTAGAAAGGAGGAGAG