Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

OQU82239
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:6:55210982:55217397:-1 gene:SORBI_3006G200700 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGCCTCGCAAGGTTGTATCTGGACCCGACTATGATGATGAGTACGATGACTATGATGAG
TATGATGATGATGATGAGTATGATGAAAATGAATACGCCAACAATCATCCTGTTAAGATG
GGGAAAGAATCATTGAAGAAGTCCTCAATTACAGTGCCGGTTCATTGGACGTGTTCCATG
TGCACGTTCAGTAATCATGAAAGCATGGTGTATTGTGAGATGTGTGGGGTTTTCCGTGAG
ACCTTTGTCAAATCTGCGAAGGATGGTCTTTTAAAAGATGCAGCCGTTGCAGTGTCAAGT
GAGCCTAGGACATCTGCTGCATCAAAAATCGATTCTGCAAAGACGCCAGTGAAGACTCGT
GCCGCAGATTCTGATAGTGATTCTGCGAGAAAGCATGCTAGTATGTCTTACGATAAAGCC
AATTCCATGCGGTTACCATCTGCTGGTAGCTCACTAGGTGCTGAAAAAAAGAAGAAAACT
CCTGTACTTTCTGATGCAGTACCTGTGGAGAGGATACCTCTGTTGGCTTCCGATGGTTTT
CAGCCAAAGGGTAACCAGAGTGGCGGGGCTAGCAGTTCTTCACAGAGTGACAGTGTGATC
CAGAAACTCTCTTCTGACATAGGCCAGCTAAATGTAGACAAGAACAATGTGAATGTTACA
AAACCTTGTTTGCCTGAAGAATATAAGCCTGAGAAGTGGATGTTAGCTGATCCGGAGTCA
GGGGCGCTGAGCCAACTAAACCTTGCAATAGTCGGTCATGTTGATTCTGGCAAGTCGACA
CTATCTGGGAGATTACTGCATCTTTTAGGAAGGATATCAAAAAAAGATATGCACAAGAAT
GAAAAGGAATCGAAAGAGAAAGGGAAGGGGTCATTTGCTTTTGCATGGGCCATGGATGAG
AGCAGTGAAGAAAGGGAACGGGGTGTGACAATGACTGTGGCTGTGGCTTATTTGGAGACC
AAGAAATTCCGTGTAGTTTTGCTTGACTCACCTGGCCACAAAGATTTTGTGCCAAATATG
ATATCTGGTGCAACACAAGCTGATGCAGCTATTCTTGTCATTGATGCTTCCACTGGTTCT
TTTGAAGCTGGCATGGATGGTGAAGGAGGAAAAGGTGTTGGCCAGACTAAAGAGCATGCT
CAGCTTGTTAGAAGCTTTGGTGTCGAACAGCTTGTTATTGCAGTCAACAAGATGGATGCT
GTTGCATATGCAAAAGAAAGGTTTGATTTCATCAAACTACAACTTGGTAGTTTCCTGCGG
TCATGCAACTTCAAGGACTCAGCTATTACCTGGATTCCTCTTAGTGCTGTAGAAAACCAA
AACTTGATCAGCGCTCCTTCAGATGCTCGTCTGACCTCCTGGTATCAAGGGTTTTGTCTC
TTGGATGCTATAGATTCCCTGCAGCTTCCTTCTCGGGATGTTTCAAAGCCCTTGATTCTT
CCAATCTGTGATGTTATAAAGTCTCAGTCAACAGGACAGTTGGCAGCTTATGGAAAATTG
GAAACTGGAGCCATTAAAAATGGTTCTAAGGTGTTAGTTCTACCTTCTGGGCAAGAGGCA
ACTGTGAAAACCATTGAGCGGGACTCTAATTCATGCACCATAGCGAGAGCTGGTGATAAT
GTGGCAATTTGTTTACAGGGTATTGATGGAAATCAACTAATACCTGGCGGGGTTCTTTGC
CACCCTGGTTTCCCTGTGGCTGTAGCTAACCACTTGGAGCTGAAGGTTCTAGTCTTGGAC
ATCACTACTCCTATTCTTTTTGGCTCTCAGGACTGGCAAACCAAGTAA

Peptide Sequence

PEP ID

OQU82239
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:6:55210982:55217397:-1 gene:SORBI_3006G200700 transcript:OQU82239 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MPRKVVSGPDYDDEYDDYDEYDDDDEYDENEYANNHPVKMGKESLKKSSITVPVHWTCSM
CTFSNHESMVYCEMCGVFRETFVKSAKDGLLKDAAVAVSSEPRTSAASKIDSAKTPVKTR
AADSDSDSARKHASMSYDKANSMRLPSAGSSLGAEKKKKTPVLSDAVPVERIPLLASDGF
QPKGNQSGGASSSSQSDSVIQKLSSDIGQLNVDKNNVNVTKPCLPEEYKPEKWMLADPES
GALSQLNLAIVGHVDSGKSTLSGRLLHLLGRISKKDMHKNEKESKEKGKGSFAFAWAMDE
SSEERERGVTMTVAVAYLETKKFRVVLLDSPGHKDFVPNMISGATQADAAILVIDASTGS
FEAGMDGEGGKGVGQTKEHAQLVRSFGVEQLVIAVNKMDAVAYAKERFDFIKLQLGSFLR
SCNFKDSAITWIPLSAVENQNLISAPSDARLTSWYQGFCLLDAIDSLQLPSRDVSKPLIL
PICDVIKSQSTGQLAAYGKLETGAIKNGSKVLVLPSGQEATVKTIERDSNSCTIARAGDN
VAICLQGIDGNQLIPGGVLCHPGFPVAVANHLELKVLVLDITTPILFGSQDWQTK

Transcript Sequence

Transcript ID

OQU82239
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:6:55210982:55217397:-1 gene:SORBI_3006G200700 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

CCCACCGCCTGGACTCGTCTCGCCCGCGGCCGATCTCCTCCATCCGCTCGCCGCGCCGCA
ACCCGGAGAGGAGACTGCGCTCTGTCGAGCACCACCTGGGGCTCTGCATCCTCGCGACTA
TCTCCGGCACGGCGTCCGCCCTCTGCAGCCCCGGTGTCCCTGCGACCGTCGCTGCTGTCC
TACTTCGCCACTGGCCTTTTTGCCCGGCGACGAGCACCACCAGGACACTAGGTATTCCCT
CCCCTTGGTCCTCCCTTCCTGCTGGGGTGGAGTGCAGCAGCTGTAGTTACGGCTGCAGAG
AGGACTGAAGTTTTGTGGGTGCGAAGTAGGTAGACTAGATACGCGGTGAGTTATCAATTT
ATCTTCTGTCTCTAGTTCTCTGGGATCTCTGTAGCTTGCTCTGATTTGATGTGCTGTAAT
TTGTCAGTAGAATCGTGGATTTTCTGGAGATCGTGACACGAACTTGATGATATACTTCTC
AGTTTGTTTGGGGAAAGAAGATCTTGTCAACTATTAGCATGAAATATTTGCTAGATTATG
GGTGAGCTGATAGAGCTTATATTAGGCAATTGAGTTAGCTATTTGCTTTGGCATCAGATT
GTTAGGATTTTTCAAATTGTGGATTTCAATTGCATCTATTAAGTATGGATGTGCGGCTGG
GTTAGAGATGACAATTGGTTGGAGCCGAAGCTTATGTTAGTCTTACCAAGTAGTATGTCA
TTAGGAACCCCTCTCTGTTCTGGGGCCACATTTGGTACTACATATGCCACTGGCAACTGG
CCATTTTGTTGTGGATGGGATTATAGGAATCCTTATTAAGTTGAGCCATTCTTGATTTTG
AATTTACTAGCCATGTGCATGGATCACAGTGCTTTCCTTGTTGAATCTCCTAATGGCAGG
AAAATGCCTCGCAAGGTTGTATCTGGACCCGACTATGATGATGAGTACGATGACTATGAT
GAGTATGATGATGATGATGAGTATGATGAAAATGAATACGCCAACAATCATCCTGTTAAG
ATGGGGAAAGAATCATTGAAGAAGTCCTCAATTACAGTGCCGGTTCATTGGACGTGTTCC
ATGTGCACGTTCAGTAATCATGAAAGCATGGTGTATTGTGAGATGTGTGGGGTTTTCCGT
GAGACCTTTGTCAAATCTGCGAAGGATGGTCTTTTAAAAGATGCAGCCGTTGCAGTGTCA
AGTGAGCCTAGGACATCTGCTGCATCAAAAATCGATTCTGCAAAGACGCCAGTGAAGACT
CGTGCCGCAGATTCTGATAGTGATTCTGCGAGAAAGCATGCTAGTATGTCTTACGATAAA
GCCAATTCCATGCGGTTACCATCTGCTGGTAGCTCACTAGGTGCTGAAAAAAAGAAGAAA
ACTCCTGTACTTTCTGATGCAGTACCTGTGGAGAGGATACCTCTGTTGGCTTCCGATGGT
TTTCAGCCAAAGGGTAACCAGAGTGGCGGGGCTAGCAGTTCTTCACAGAGTGACAGTGTG
ATCCAGAAACTCTCTTCTGACATAGGCCAGCTAAATGTAGACAAGAACAATGTGAATGTT
ACAAAACCTTGTTTGCCTGAAGAATATAAGCCTGAGAAGTGGATGTTAGCTGATCCGGAG
TCAGGGGCGCTGAGCCAACTAAACCTTGCAATAGTCGGTCATGTTGATTCTGGCAAGTCG
ACACTATCTGGGAGATTACTGCATCTTTTAGGAAGGATATCAAAAAAAGATATGCACAAG
AATGAAAAGGAATCGAAAGAGAAAGGGAAGGGGTCATTTGCTTTTGCATGGGCCATGGAT
GAGAGCAGTGAAGAAAGGGAACGGGGTGTGACAATGACTGTGGCTGTGGCTTATTTGGAG
ACCAAGAAATTCCGTGTAGTTTTGCTTGACTCACCTGGCCACAAAGATTTTGTGCCAAAT
ATGATATCTGGTGCAACACAAGCTGATGCAGCTATTCTTGTCATTGATGCTTCCACTGGT
TCTTTTGAAGCTGGCATGGATGGTGAAGGAGGAAAAGGTGTTGGCCAGACTAAAGAGCAT
GCTCAGCTTGTTAGAAGCTTTGGTGTCGAACAGCTTGTTATTGCAGTCAACAAGATGGAT
GCTGTTGCATATGCAAAAGAAAGGTTTGATTTCATCAAACTACAACTTGGTAGTTTCCTG
CGGTCATGCAACTTCAAGGACTCAGCTATTACCTGGATTCCTCTTAGTGCTGTAGAAAAC
CAAAACTTGATCAGCGCTCCTTCAGATGCTCGTCTGACCTCCTGGTATCAAGGGTTTTGT
CTCTTGGATGCTATAGATTCCCTGCAGCTTCCTTCTCGGGATGTTTCAAAGCCCTTGATT
CTTCCAATCTGTGATGTTATAAAGTCTCAGTCAACAGGACAGTTGGCAGCTTATGGAAAA
TTGGAAACTGGAGCCATTAAAAATGGTTCTAAGGTGTTAGTTCTACCTTCTGGGCAAGAG
GCAACTGTGAAAACCATTGAGCGGGACTCTAATTCATGCACCATAGCGAGAGCTGGTGAT
AATGTGGCAATTTGTTTACAGGGTATTGATGGAAATCAACTAATACCTGGCGGGGTTCTT
TGCCACCCTGGTTTCCCTGTGGCTGTAGCTAACCACTTGGAGCTGAAGGTTCTAGTCTTG
GACATCACTACTCCTATTCTTTTTGGCTCTCAGGACTGGCAAACCAAGTAAATCAGCACC
TCGATTTCTTAAATCCAAGCAGAATGCTCTTATACAGGTAATAAATGAAATGGATCATTG
TGAATGGCTTTCTTTTAGATTACCCAACGATCATACATTATTCATATACCAGTATACTGT
TTTTCTTGCAATTTTTCAGGTCACACTAGATGGAGCTGTCTGTGTTCAGGAATTCTCTAA
GAGCCGAGCTCTTGGGAGGGCATACTTGAGGTCGTCTGGGCGCACTATTGCTGTTGGCGT
GGTTAATAGGATAATTGGCCAAGATCAGAACTAGAAGACCCACTCTCTTCTGGAATCTGA
ACCAAATCCTTTTAGTTCTTACGGTTATACTCTGTAGTAGACCCTGGCAACATGATGCTG
GCAAATTTTGTTTAGCAGTTGCTTATCGCCATTCCATTGTATTGAGATATAGGTGTAAGA
TAGTCGTCACAGCTGAGTTTTGTTCTAACCCCCCGGCTTTTGCGTAGGCCCTAGGAACAC
GATGTTGGCAAATTTTGCTTAGCATTTGCATATCGCCATTCTTGTATTGCGATGTGTGTA
AGATGGTCACAGTTGAGTTTTGATTTCTAATCCTTGGCTTTTGGAGAAGTGCTATGGAAT
TCCCTCGAA