Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

OQU82207
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:6:54604099:54607085:-1 gene:SORBI_3006G192100 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGCTCGTTTTCAGGCGAGGAACGATCAAAGTCCTGCTGCAGATCACGTTGGCCATGGG
AACTTCATGGATCATCATCTGAAGAACACTCTGAACTGCGGCGAACTGGACTTGCCAGGA
GGAGCGCGAGCCCCTAAGGCACGCAAGCCATACACGATATCCAAACAGAGGGAGAAATGG
ACCGAGGACGAGCACAAGCTCTTCTTGGAAGCCCTCCAGCAGCACGGCCGTGCCTGGCGC
CGTATACAAGAGCACATAGGCAGTAAGACTGCCGTGCAAATCAGGAGCCACGCTCAGAAG
TTCTTCTCCAAGGTCATCCGAGAATCCTCTGGGGATAGCAACAGCATAGCTGCTCCACCG
CAAATTCAGATTCCGCCGCCACGGCCCAAGAGGAGGCCAACACACCCGTACCCGCGCAAG
CTGGGTAATTCAGTCGGCAAGGGTGCCTCTGCGATCAAACAGCTTCAGAAGCCCCTGCTG
CAGACACAATCCCTGTCTGAGCAGGAGAATTGCTCACCAAAATCTGTGTTATCCACAGCA
CAGATAGACTCCGACACCCTGCAAACTGAAGGTAGTGGATCACCAGCTTCCTCGGTTTAC
ATGGAGGACAAATGCCTCACACCAAGCACATCAGTAGCACTTTCCAAGGATGCCACCACT
TCCAACGATGTGGCATGTGAAATACCTGAAGGTCCAGTTCTTAGGCTATTTGGCAAGAGG
GTTGTGGTTAATAATTTAGATCAGCAGCCAAGCTCCAATACTGGGAGTCTACAACACGTG
GCAGACATGGAACTGGATGCTTCAGCTGAGACACCAACTGGTGGAACTGGGGAGTTGCCT
TCCCATGTTGCAGAAGAAGCAAAGACATGGTGCCCGTGGCTGACCGGTACACAGCAGATT
ATGTACTATCTTCCTCAAGGAGAGACAGTTGCCTCAAATAAGCAGCAGAACCAACCATCT
CAAGTTCCACACAGCAAGGTCACGAGGGCAGAAGGATCATGGACGGAGTCGATCACAACC
TCCAGCAGTGTGGCTGAAACAACTCAGAATTCAGATTCTATAGAATCTACGAAAGTAAAC
AACGATGAAGACAAAGTGGTACCTGTTCCAGGTTCAAGGAAATGTGCAAGCACAGTTCCA
GCCTGCCTTCGAGGTTTTGTACCATACAAGAAGTGCACAGCTCAAAGCAAGATGCTGCAG
CCAGAGGCAACTGGGGAGGAGGCAGATAGAGAGATGACAAGGCTGTGCCTGTAA

Peptide Sequence

PEP ID

OQU82207
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:6:54604099:54607085:-1 gene:SORBI_3006G192100 transcript:OQU82207 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MARFQARNDQSPAADHVGHGNFMDHHLKNTLNCGELDLPGGARAPKARKPYTISKQREKW
TEDEHKLFLEALQQHGRAWRRIQEHIGSKTAVQIRSHAQKFFSKVIRESSGDSNSIAAPP
QIQIPPPRPKRRPTHPYPRKLGNSVGKGASAIKQLQKPLLQTQSLSEQENCSPKSVLSTA
QIDSDTLQTEGSGSPASSVYMEDKCLTPSTSVALSKDATTSNDVACEIPEGPVLRLFGKR
VVVNNLDQQPSSNTGSLQHVADMELDASAETPTGGTGELPSHVAEEAKTWCPWLTGTQQI
MYYLPQGETVASNKQQNQPSQVPHSKVTRAEGSWTESITTSSSVAETTQNSDSIESTKVN
NDEDKVVPVPGSRKCASTVPACLRGFVPYKKCTAQSKMLQPEATGEEADREMTRLCL

Transcript Sequence

Transcript ID

OQU82207
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:6:54604099:54607085:-1 gene:SORBI_3006G192100 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

AACCCGACCCGCGGAGCAGCGACGGCCACAAGAATCGAGCGGCGCCGGGGCGTCCTCCGC
TCGGGGCCCCACGAAGCCTGCAAAGGCGGATAGATTATTCATCCGGTCCCGGCGGCGGCG
TGAGGACGGACGGAAAAGCGCGCACGGAAAAGGGACACCAGCGGAAAAATCCTGTCCGAC
GTGGCGCCCTGCCCTCGCCTCCCTTTTTCTCCGCCCTCTCGCTGCACCATCCAGCATTCC
AGCCTCCATTTCCTTTCTTGCCTGCCTGCGTCCTCTCCTCCCCTGTGAAACCGGCAGCAC
TCGGAAGGGTGTTCAGGCTCTGCTGGCTTGGGTCTCGGTGCACGCTCTCGCCTTCTTCTG
CTGCTACTGCTGCTTGATTCGTGCTCGCGGTGAAGACTCGGTGGCTCTTGCTGGTTCAGA
AATCTCGAGATGGCTCGTTTTCAGGCGAGGAACGATCAAAGTCCTGCTGCAGATCACGTT
GGCCATGGGAACTTCATGGATCATCATCTGAAGAACACTCTGAACTGCGGCGAACTGGAC
TTGCCAGGAGGAGCGCGAGCCCCTAAGGCACGCAAGCCATACACGATATCCAAACAGAGG
GAGAAATGGACCGAGGACGAGCACAAGCTCTTCTTGGAAGCCCTCCAGCAGCACGGCCGT
GCCTGGCGCCGTATACAAGAGCACATAGGCAGTAAGACTGCCGTGCAAATCAGGAGCCAC
GCTCAGAAGTTCTTCTCCAAGGTCATCCGAGAATCCTCTGGGGATAGCAACAGCATAGCT
GCTCCACCGCAAATTCAGATTCCGCCGCCACGGCCCAAGAGGAGGCCAACACACCCGTAC
CCGCGCAAGCTGGGTAATTCAGTCGGCAAGGGTGCCTCTGCGATCAAACAGCTTCAGAAG
CCCCTGCTGCAGACACAATCCCTGTCTGAGCAGGAGAATTGCTCACCAAAATCTGTGTTA
TCCACAGCACAGATAGACTCCGACACCCTGCAAACTGAAGGTAGTGGATCACCAGCTTCC
TCGGTTTACATGGAGGACAAATGCCTCACACCAAGCACATCAGTAGCACTTTCCAAGGAT
GCCACCACTTCCAACGATGTGGCATGTGAAATACCTGAAGGTCCAGTTCTTAGGCTATTT
GGCAAGAGGGTTGTGGTTAATAATTTAGATCAGCAGCCAAGCTCCAATACTGGGAGTCTA
CAACACGTGGCAGACATGGAACTGGATGCTTCAGCTGAGACACCAACTGGTGGAACTGGG
GAGTTGCCTTCCCATGTTGCAGAAGAAGCAAAGACATGGTGCCCGTGGCTGACCGGTACA
CAGCAGATTATGTACTATCTTCCTCAAGGAGAGACAGTTGCCTCAAATAAGCAGCAGAAC
CAACCATCTCAAGTTCCACACAGCAAGGTCACGAGGGCAGAAGGATCATGGACGGAGTCG
ATCACAACCTCCAGCAGTGTGGCTGAAACAACTCAGAATTCAGATTCTATAGAATCTACG
AAAGTAAACAACGATGAAGACAAAGTGGTACCTGTTCCAGGTTCAAGGAAATGTGCAAGC
ACAGTTCCAGCCTGCCTTCGAGGTTTTGTACCATACAAGAAGTGCACAGCTCAAAGCAAG
ATGCTGCAGCCAGAGGCAACTGGGGAGGAGGCAGATAGAGAGATGACAAGGCTGTGCCTG
TAAAATTTTGGGCCGCCACCGCTACTCTGGATATTTTTGCTGATATTCAATATGTATGAC
TAGTACAGTACAGCAGTACTGATGTTTTGCAGGATGACCATTCTGGCGTTCTGCTGTTAC
TTATGAGACGCAGATTGAAACTGGTGAAGCAGCCTTCCACAAATGGAGATGGCTGACTGA
CTGTGGTTCCTGTCTGCCATTGTATAGTACAAGACTAATGTTTCCATTTTCCTCTCGGAG
TGTTTGTAATTTTCCCCCGGCTGTGGAGGTTCAGAGGTCAATGGTTTTCATGCAGAAAGT
ATTGTAATAGTTGTAGTAGGAGACCATATTGTATGACCTATATATGTAAATTATGTATAT
TGTTTTGTGAAAC