Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

OQU82195
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:6:54270103:54277277:1 gene:SORBI_3006G188500 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGTCAGGGATCGCAACAATTTGTCGCCGGTCATGTCGATCAGCTGCTAGTCAGACTCTA
ATGGAGACATATTTTGGCCCGTCTGTATCTTCTGGTGCTCTGAGGTGGTTCAGCAGTGGT
GCTAAGCACTCAAGAAAACCTGACTTTTCTGTTGCTAACAAGATTAAGGTGGTGGATTGG
TATTCTGCAGTTAATGATGTGTCAAAGATCAGAATGTTGCCCCTTTCATGCCGTATGAAC
ACTAACTGGTTGATTGCTTCAAAGTCCAGACATGGTGCATTGCCAGGATTCTTAGGTGTT
TCAAGCTTCCATCGTGGATACTCGTCAGATACTGGAATCAAGCCAGAAGCTTCACAGAGT
GCTGTCTCTAATCTTCCTTCTACAGAAAGCTCTGAGGTTGGCACTGCAGGTGGTGGTGGG
GGTTCATGGATTGAGATCTTGGATAATGCTCGCAAGTCTACTCTAGATGCTACCACTGAT
GCAGGCAAGAAAGTCAAGGAGCTGACTGATGCAGTTGCACCTCATGTCCAGCAGCTATTT
GATACATATCCAAATCTTGAAAAGGTAGTTGTTCCACTTGGCGGAACACTATGTGGTACA
ATGATGGCATGGTTGGTCATGCCTATCATTCTAAGGAGGCTTCACAAGTATGCATCACAA
AGTCCTATAGCAGCACTCATGGGGAACTCAACCAAGATTGATGTTTCGTACCAATCTAGT
CTCTGGTGTGCATTAGAGGATCCTGCAAAATATCTGATCACATTCATGGCATTTTCAGAA
ATGGCGTCACTTATTGCACCAAGCATATCAACTTATCTTCCACAGGCATGGAGGGGTGCA
TTTGTTCTGTCTTTTGTATGGTTCCTTCAGAGATGGAAAACCAACTTCATCGCTAAAGCT
ATGGCCAAACCAGATGCCTCAAGTGTTGACCGCGACAGGATTTCAGCATTTGATAAGGTT
TCTTCATTGGGACTGATTGGACTAGGAGTAATGGGTCTTGCTGAAGCTTGTGGTGTAGCT
GTTCAATCAATATTAACTGTTGGTGGTGTGGGAGGTGTCGCTACTGCTTTTGCTGCTAGA
GATGTCCTTGGTAACATTCTGAGTGGGTTCTCCTTGCAGTTTTCTAAGCCATTCTCAATT
AACGACTACATAAAGGCGGGGCCAATAGAAGGTAGGGTGGTTGAAATTGGACTTACTTCT
ACTTCATTGATCAATCCAGAGAAGCTCCCTGTCATAGTACCCAACTCTTTGTTCTCCAGT
CAGATGATAGTTAACAGATCACGAGCTAATTGGCGAGCTAGTGTGACAAAGATTCCTATA
CGAATTGAGGATATTGAGAAGGTTCCTCCTGCATCAGAGGAGATAAAGAATATGTTAAGG
TCCAATCAAAATGTGTCCTTTGATAGTGATGTTCCTTACTGCTATCTCTCGAGATTGGAA
AGTTCATATGGAGAACTCACCATTGGATGCAACCTAAAAAACATGAGAAAAGATGAGTGG
CTATCTGCCCAACAAGAAATTCTTTTGGGAGCTGCTAGGATTATCAAGTCACATGGCATT
GAATTGGGAAGCACCATGCAGTGCTGTTAA

Peptide Sequence

PEP ID

OQU82195
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:6:54270103:54277277:1 gene:SORBI_3006G188500 transcript:OQU82195 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MSGIATICRRSCRSAASQTLMETYFGPSVSSGALRWFSSGAKHSRKPDFSVANKIKVVDW
YSAVNDVSKIRMLPLSCRMNTNWLIASKSRHGALPGFLGVSSFHRGYSSDTGIKPEASQS
AVSNLPSTESSEVGTAGGGGGSWIEILDNARKSTLDATTDAGKKVKELTDAVAPHVQQLF
DTYPNLEKVVVPLGGTLCGTMMAWLVMPIILRRLHKYASQSPIAALMGNSTKIDVSYQSS
LWCALEDPAKYLITFMAFSEMASLIAPSISTYLPQAWRGAFVLSFVWFLQRWKTNFIAKA
MAKPDASSVDRDRISAFDKVSSLGLIGLGVMGLAEACGVAVQSILTVGGVGGVATAFAAR
DVLGNILSGFSLQFSKPFSINDYIKAGPIEGRVVEIGLTSTSLINPEKLPVIVPNSLFSS
QMIVNRSRANWRASVTKIPIRIEDIEKVPPASEEIKNMLRSNQNVSFDSDVPYCYLSRLE
SSYGELTIGCNLKNMRKDEWLSAQQEILLGAARIIKSHGIELGSTMQCC

Transcript Sequence

Transcript ID

OQU82195
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:6:54270103:54277277:1 gene:SORBI_3006G188500 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

AATTAAAAGCTATTTGGCTACTTGATTGATGATCCCAACTAGCGTAGAACTTTATGCAAA
AACTATCGGGTGTACACATCAATGTCGCTTTACTGGGTCCGCCCCTGAGTGGCTGGGGTG
GCGGCACTAGTCCTTGCTCCTTAGCAGCTGGAGCGGTCTCTGTTCTGTATGCTGGGCGTG
ATGGGTATGCTGTTTGAACCTAAACTTTTGGGCGATGTTTTCGTTTTGCAGCTGAATGGA
ACTGTGGTGGTTTCCCTTTGTAGTTTTGTGTCTAGGCACTTGGTGGGGTAGTTATTTTTG
GTGTTGCTCAGGAGAAGTTCGAATCCAGTTTTAGGATGCCAACCACAGAATCTGTTGTTA
TGTTGTGGTAGTTGACACCCTGGTTATTTCCTGAAGCAGATGGAGGAACATTTGATTTAA
AATTTGTGTAGCCGGACTTTGCATCCTTTAGTTTATCAGCTTCGCGTCTTTGGATCCATG
GAAGTGCAATTTCCATTAGAGGAAATTTTAGGTGTACGCTTCTATAGGTATTTATAAGGA
TGGTGAAAATATAAGTGATAAGGAGATATGATTCATCCTTTGTTTGCCATCATTGCTAAC
AATTTTGATATTATCCTCATTTTCTAGCATATAAATTTCATTTGTACGAAAAGAAAAACA
TCTGAAGTTCTGAACCATATTAACGCTTTCATTATATGGGCCTGTGAAACTTGCACAGTT
GCACATTTTCAGGAAAATAATTTTCCTGGCATCTTTTTGTTCGCAGGAATATTCGTGTCA
AGTTTGCATTGAAGTATTATGTCAGGGATCGCAACAATTTGTCGCCGGTCATGTCGATCA
GCTGCTAGTCAGACTCTAATGGAGACATATTTTGGCCCGTCTGTATCTTCTGGTGCTCTG
AGGTGGTTCAGCAGTGGTGCTAAGCACTCAAGAAAACCTGACTTTTCTGTTGCTAACAAG
ATTAAGGTGGTGGATTGGTATTCTGCAGTTAATGATGTGTCAAAGATCAGAATGTTGCCC
CTTTCATGCCGTATGAACACTAACTGGTTGATTGCTTCAAAGTCCAGACATGGTGCATTG
CCAGGATTCTTAGGTGTTTCAAGCTTCCATCGTGGATACTCGTCAGATACTGGAATCAAG
CCAGAAGCTTCACAGAGTGCTGTCTCTAATCTTCCTTCTACAGAAAGCTCTGAGGTTGGC
ACTGCAGGTGGTGGTGGGGGTTCATGGATTGAGATCTTGGATAATGCTCGCAAGTCTACT
CTAGATGCTACCACTGATGCAGGCAAGAAAGTCAAGGAGCTGACTGATGCAGTTGCACCT
CATGTCCAGCAGCTATTTGATACATATCCAAATCTTGAAAAGGTAGTTGTTCCACTTGGC
GGAACACTATGTGGTACAATGATGGCATGGTTGGTCATGCCTATCATTCTAAGGAGGCTT
CACAAGTATGCATCACAAAGTCCTATAGCAGCACTCATGGGGAACTCAACCAAGATTGAT
GTTTCGTACCAATCTAGTCTCTGGTGTGCATTAGAGGATCCTGCAAAATATCTGATCACA
TTCATGGCATTTTCAGAAATGGCGTCACTTATTGCACCAAGCATATCAACTTATCTTCCA
CAGGCATGGAGGGGTGCATTTGTTCTGTCTTTTGTATGGTTCCTTCAGAGATGGAAAACC
AACTTCATCGCTAAAGCTATGGCCAAACCAGATGCCTCAAGTGTTGACCGCGACAGGATT
TCAGCATTTGATAAGGTTTCTTCATTGGGACTGATTGGACTAGGAGTAATGGGTCTTGCT
GAAGCTTGTGGTGTAGCTGTTCAATCAATATTAACTGTTGGTGGTGTGGGAGGTGTCGCT
ACTGCTTTTGCTGCTAGAGATGTCCTTGGTAACATTCTGAGTGGGTTCTCCTTGCAGTTT
TCTAAGCCATTCTCAATTAACGACTACATAAAGGCGGGGCCAATAGAAGGTAGGGTGGTT
GAAATTGGACTTACTTCTACTTCATTGATCAATCCAGAGAAGCTCCCTGTCATAGTACCC
AACTCTTTGTTCTCCAGTCAGATGATAGTTAACAGATCACGAGCTAATTGGCGAGCTAGT
GTGACAAAGATTCCTATACGAATTGAGGATATTGAGAAGGTTCCTCCTGCATCAGAGGAG
ATAAAGAATATGTTAAGGTCCAATCAAAATGTGTCCTTTGATAGTGATGTTCCTTACTGC
TATCTCTCGAGATTGGAAAGTTCATATGGAGAACTCACCATTGGATGCAACCTAAAAAAC
ATGAGAAAAGATGAGTGGCTATCTGCCCAACAAGAAATTCTTTTGGGAGCTGCTAGGATT
ATCAAGTCACATGGCATTGAATTGGGAAGCACCATGCAGTGCTGTTAATTCACGCTTCCC
GGGACTTGACTTTTAAGTAGGGTAAGTACATCAATATTTGGCTCTTGTAACTTGTAGGTG
CATGACTGCTATGCTAAAATCCATGAAGCCGTAAGCTCTATCAAGCTAAGTTACATGTTA
CGTTTCTTCTTTGGTCCCTAGGTTAAGTATTTTTCTTTTCAGTTAAAGTTTATGCCAAAC
CATGAGAGCATCATATGGTTTACTGGTTTTCCTAGTTCACAAATTCCTGCAACTGATATT
GAACAGTTTGCTTGTTGGTTCATTGTAACCTGCATGCCAAAAACTTCCTTGGATTTAGGC
ATTTTCTTCTTGAAGCTTTGATTAATCAGTACCAACTTTTCGTGTATATCTTCACTTTCT
CACTTTTTTGACGGGGGATTGCATTCATTGGCAGGTAATACCTTTAGCCTGCAGAAGTCT
AGAACTCTACATACAGACGACACCTAGGAGTTTTGCTTACGGGTGCGAAGGTAAAGACGT
CAGTGTTTTATGTCTTGACAGACCATTGACACCCACTACCAATACTATTTTGTTACTGCC
ATTTCCTTTGGAACTAAAGCCCAGCTCCCTTTTGTGGTCTTCCGTTTTGGTTGGTGCTTG
GATCCGTTTCTGGGGAGCTTCGTTATCCAATGTAGACTGGTGAACTTTTGCTCCGCGGGC
CGTGTGGTATGGATGAGCCGTGAGCGGATTGTTGCCCATTTCTGTGAAATATTGGGTTTT
AACCTCGAATTTTTAAGTGTTTGACATAGTAGTACTCAATTGTCTAGCTCCTGATAGTCG
ACCATCTCGAAGCAATTGGTGTTTGACAGTCCATTTCTGAGGACTTGCAAGTTGCTTGCC
CCAGGATAGAATCTCTGCTTTACCATTCTCGGAACTCATCTGTGGCGTGGTCGCTGTGCT
CCTCAAAGTTTGTGTGTCGTAGATAATGCGGGACACGCGTCGTTAGAGAAGCTTTT