Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

OQU82118
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:6:53057562:53061725:1 gene:SORBI_3006G175400 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGCCATCAACCTTACTTGATGGTCTCCCTAACGAAGTTGCTCTCCAGTGCCTTGCACGG
GTGCCATTCTTGTTCCATCCGATGCTTCAGTTGGTTTGCCGCTCTTGGCGAGCATCAGTT
TGCAGTGGCGAACTTCTCAAAATTCGGAATCAGATTGACGCGACAGAAGAGCTCTTGTGT
GTGTTGGCGTTTGAACCAGAAAACATGTGGCAACTTTATGATCCCCTACGAGACAAGTGG
ATAACTCTCCCTGTCATGCCATCTCAGATTAGGAACATAGCCCGCTTTGGAGTGGCCTCA
GTTGCTGGAAAGCTCTACGTAATTGGTGGTGGCAGTGATCGAGTTGATCCACTTACTGGA
GATCACGACAGGATCTTTGCAAGCAATGAGGTTTGGTCTTATGATCCGCTCCACCGAGTG
TGGTCCCAGAGGGCTCCTATGCTTGTGGCTCGAGCGATGTTTGCTTGTTGTGCATTGGAT
GGGAAAATAATTGTTGCAGGAGGCTTCACTAACTGCCGCAAATCAATATCAAAGGCTGAG
ATCTATGACCCTGAAGCTGGCCTATGGGAGCCTCTCCCTGACCTTCGTCTGGCTCACAGC
TCTGCATGTACTGGACTTGTCATCAAGGGTAAGATGCATGTATTGCATAAAGGTCTATCG
ACAGTGCAGATTCTGGAAGATGGTGGCAGTCATTGGGCTGTTGAGGATTTTTCTTGGCTG
CAAGGCCCAATGGCGATGGTTGGTGGAGAGCTGTATGTGCTGAGTAACAGCTGCATTATG
AAGCAACGTGGTGAGAATTTCCCTGATAAGATGGTGTCATGCGCATCTGAGTTCCAGAGC
AGGATCGGTTTTGGGATGATTGGTGTGGGTGACAACATATATTTGGTTGGGGGAGTGATT
GGACCTGGGCCGAGAAACCAATGCATCAAGCCGCTATCTGATGTTGATATCTTGAATGTC
ACAAGTGAGAGACCAACCTGGAGACCAGGGTCACCGATGACACATTGCCGAGGGAGCATC
TGCGGCTGCGCTTTGTTGAGGATTTAG

Peptide Sequence

PEP ID

OQU82118
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:6:53057562:53061725:1 gene:SORBI_3006G175400 transcript:OQU82118 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MPSTLLDGLPNEVALQCLARVPFLFHPMLQLVCRSWRASVCSGELLKIRNQIDATEELLC
VLAFEPENMWQLYDPLRDKWITLPVMPSQIRNIARFGVASVAGKLYVIGGGSDRVDPLTG
DHDRIFASNEVWSYDPLHRVWSQRAPMLVARAMFACCALDGKIIVAGGFTNCRKSISKAE
IYDPEAGLWEPLPDLRLAHSSACTGLVIKGKMHVLHKGLSTVQILEDGGSHWAVEDFSWL
QGPMAMVGGELYVLSNSCIMKQRGENFPDKMVSCASEFQSRIGFGMIGVGDNIYLVGGVI
GPGPRNQCIKPLSDVDILNVTSERPTWRPGSPMTHCRGSICGCALLRI

Transcript Sequence

Transcript ID

OQU82118
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:6:53057562:53061725:1 gene:SORBI_3006G175400 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

TCGTGTCCAGATGCTCCTCGGCCACGTAGAGAAGTTGGCTAGGCAATGGGTGACCAGCTC
TAGTAGTCAGTGGCATTGAGGAAAAAAAGATTTTGTTGTCGAGATCAAATGGTCTAGAGA
TATTTAAGTCTAATTGTCAGACCACTTAGCTATGGTTAGGCTTCAGAATAGATAGAATGA
CACACGGTTACAGTGCGATTTGGTTAATCTTCCATAATTCCCTCGCCGGCCCCTCCTGTG
CTCCCCATTTCCTTCCTCCACCCAACGAGAGCCAAAAGCTTCGCGCCCCACGCCGCCCCG
CCGGCGACACCGTCCGTTCCCCGCAGCGACCGGCGACCAGGCCACGGGCTTTGATCGCCT
CCGCCCCGTGCCTACCCCGGCCGCGGGCGTAGCTGCCACCTCCACCGCAGCAGGTCCGGC
CCGGCCTCGCCCGGTCCCCCCTCGGCGACTTCTGATCCAGCCGCGTCGCGCGACAGCTCG
TCGTCCGAGTCCGATCCCCGCCACCGCGGCGGAACGAGGCGTCTCCGGTCCCCGAGGTGA
GTCCTCCCCCCCAACCGGTGGTGCGATTCCGCCCTGGTTTCGATGGTTGCTTTGCCGTGG
CGCGGTCCCAGATTCGCGACGTATTCTCCATCCAAACCCTAGATTCGCCATTCCCTGCGT
CGCGTCTGCGGCGGGATTTCAGCGATTAGGTGCCTATTCTATGATTTGAGCACCTTCGCC
AAGGAATTTTAGGGTGAATCAATGCTGGTTCGGTGTACTTTCAACATTAATAATCAGGTG
TCCATTAGAGATTAGAGATGTATTGGGGAAAAAAAAGAAAGGTGCATTGGGAAGTGAGAA
TAACAACTAATTTGGAACAATTCACAATGCTATAAGGTCGAGTATTATGGGACAGAGGGA
GTACTCTACTACGTCTTATTTGTAAATTAGCTATGTTGAGTCGTTGACAATGGGTAGAGG
AAAACTTTATCCCAGTACTCAAGCATTTCTACATTGACCACGCAACATCAGCATACGCTT
CAAGCTTTGTGTCCTTAAAATTTTTTAACATACAATCAGGACGATTATTTGATAATAGAT
ATAGCTTCAGCAACTAGGTAGAAAACAGGAGCTCCACATGGGATGTGGCAGAGCAAGCTG
TAACTAAAGGGATTGTAGGTTTTTAGATGTTCAGACAACGAGACATGTTTTTTATGGTTT
ATTGGGTTCTATATTGAGCCTTGTCCATATGCTCCAAGACACATCTTCGGTGCAATCGTG
AAAGCCCTTTGCAAAACCATACTTATGAGTTAAAAATTTTTTTGAAACTGTACACACCAA
TAGTGGATCTACAGATGTGCACTTTCACAAAATTTGAGATTCAACCTCGTTTTGCAAAAA
ATCATATGAAAATAAAAAATTTCATTTGCATATGCACTAGTGCATATGCAAATCAAATTT
GTTATTTTCATATGTATTTTTACAAAACGAGTTTGAATCTCAAATTTTGCCACAATGCAT
GTCTATAGATGCACTGTTGGTATGCATAGTTTCAATTTTTTTTAACTCCTAAGTATGGTT
TTAATGGGGTTTTCACGGATTGCACCGAAGATGTGGTTTGCACTGAATATTTTGCCATAC
ATGATAACATGATGCAATTAACAAGAAATTCAAACAGGAGCAACCACAAAAATGATGTGA
AAAGCAGCAACTTTCACCACTTTATCCATTAAACAAACACTTCCCTGTTGAACCAAAATT
TGTTCTAAATGCAAATTATCACAAAAGAAAACTATGCATGGAGGGAACAGAAGGTATGTG
ACCCGGTAAAATTAGGCAGTAGCCAGTGTCAAGAAATCACAAGTAATCAAATATACTAAA
ATCCAAGCAGGGGCAAATATTGGCTACAATCTCAAGGAAAGATTGCTCAAGAAATGGAAA
GAGAGTGAAAGGATTTGAGGCTTAACAAGTAACAACTATATTGACTTCCATGTGTTATTC
AGGAACTTTATAATATATAGGATATACCATTATCTGTCATTGTGTATTTTGATTCATGAT
TTTAGATCAAAGGAACAAAATAAACACCCCAGCAAAAAAGAAGAATTTTCCTGTAGCTTG
GCTGATCATTGCCACTGACAAAAACTAGCTAAAGCAAGAAATGGCGCTGCCTCTATGTTA
ATGTTATGTTGTTAGCTCACTGAAAACACCAAGCATGCAAATGATATACTATCATGACTT
TTGCAAAAGTTGAGGGGGCAAATATGTGTTGTTACCTCAACTTTTGCAAAATTTTTTTGC
AAAGGGTTTTCACAATTGCACCGAAGATGTGTATTGGAGCATATGGACAAGGCTCAATAT
AGAACCCAATAAACCATAAAAAACATGTCTCGTTGTCTAAACATCTAAAAACCTACAAGC
GCTTTAGTTACAGCTTGCTCTGCCACATCCCATGTGGAGCTCCTGTTTTGTACCTAGTTG
CTGATGAATTCTGTTTTCTTGAAGCTATATCTATTATCAAATAATCGTACTGATTGTATG
TTAAAAAATTTTAAGGAACACAAAGCTTGAAGCGTATGCTGATGTTGCGTGGTCAATGTA
GAAATGCTTGAGTACCTGGGATAAAGTTTTCCTCTACCCATTGTCAACGACTCAACATAG
CTAATTTACAAATAAGACGTAGTAGAGTACTCCCTCTGTCCCATAATACTCGACCTTATA
GCATTGTGAAATTGTTCCAAATTAGTTGTTATTCTCACTTCCCAATGCACCTTTCTTTTT
TTTCCCCAATACATCTCTAATGGACACCTGATTATTAATGTTGAAAGTACAATCCCAATT
TTGCTGTACAATATATCTAACTTCTTATTATCATGTGCAGGCTTCATAAGTATTGTTGCT
TTATTGCTGCAATATTATCGTGCACAATGCCATCAACCTTACTTGATGGTCTCCCTAACG
AAGTTGCTCTCCAGTGCCTTGCACGGGTGCCATTCTTGTTCCATCCGATGCTTCAGTTGG
TTTGCCGCTCTTGGCGAGCATCAGTTTGCAGTGGCGAACTTCTCAAAATTCGGAATCAGA
TTGACGCGACAGAAGAGCTCTTGTGTGTGTTGGCGTTTGAACCAGAAAACATGTGGCAAC
TTTATGATCCCCTACGAGACAAGTGGATAACTCTCCCTGTCATGCCATCTCAGATTAGGA
ACATAGCCCGCTTTGGAGTGGCCTCAGTTGCTGGAAAGCTCTACGTAATTGGTGGTGGCA
GTGATCGAGTTGATCCACTTACTGGAGATCACGACAGGATCTTTGCAAGCAATGAGGTTT
GGTCTTATGATCCGCTCCACCGAGTGTGGTCCCAGAGGGCTCCTATGCTTGTGGCTCGAG
CGATGTTTGCTTGTTGTGCATTGGATGGGAAAATAATTGTTGCAGGAGGCTTCACTAACT
GCCGCAAATCAATATCAAAGGCTGAGATCTATGACCCTGAAGCTGGCCTATGGGAGCCTC
TCCCTGACCTTCGTCTGGCTCACAGCTCTGCATGTACTGGACTTGTCATCAAGGGTAAGA
TGCATGTATTGCATAAAGGTCTATCGACAGTGCAGATTCTGGAAGATGGTGGCAGTCATT
GGGCTGTTGAGGATTTTTCTTGGCTGCAAGGCCCAATGGCGATGGTTGGTGGAGAGCTGT
ATGTGCTGAGTAACAGCTGCATTATGAAGCAACGTGGTGAGAATTTCCCTGATAAGATGG
TGTCATGCGCATCTGAGTTCCAGAGCAGGATCGGTTTTGGGATGATTGGTGTGGGTGACA
ACATATATTTGGTTGGGGGAGTGATTGGACCTGGGCCGAGAAACCAATGCATCAAGCCGC
TATCTGATGTTGATATCTTGAATGTCACAAGTGAGAGACCAACCTGGAGACCAGGGTCAC
CGATGACACATTGCCGAGGGAGCATCTGCGGCTGCGCTTTGTTGAGGATTTAGCCTCTCC
CCAGTGTGATAATGTGGTATTCCACCATTGCTGAAGTGATTGGAGACGTCCTAAGTTTTA
TTTTATTTTGTTTTATTTTATTTTCAAGCCAATGACTCAATGTTGGACTGCCAATGAGAT
ATGTACTATATTGACATGATTGGTGTTCCAAAGAGCATTATATACTTCATTTTCATATGG
AATTTACATGCTTAGGTGCTGTTT