Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

OQU82110
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:6:52994972:52996405:-1 gene:SORBI_3006G174000 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGTCCATGGCTCTACCCAAATCCGAAATGTCCGTGGAATCCGTTGCCGTCGTGGCGGTG
CCGTACCCGGCGCAGGGCCACCTCAACGGCATGCTACACATGTCGCTGCTGCTCGCGTCC
CGGGGTCTCCCCGTGCACTACGCGGCGCCTGGGCCGCACGTCCGCCAGGCGCGCGCGCGC
GTGCACGGCTGGGGCGACGACGCCCTCCGCCGCATCGAGTTCCACGAGCTCGAGGTCCCC
GCGTACGCCACCCCGCCGCCGGACCCGGCCGCGCCCTCGCCGTTCCCGACCCACCTCATC
CCCATGGGCGAGGCCTTCGTCGCTGGCGCGCGCGCCCCGGTCGCCACCCTCCTCGCGAAT
GTCTCCGCGCGCCACCGCCGCGTGGTCGTCCTGTACGATCGCCTCAGCTCCTTCGCCGCG
CCCGAGGCGGCGCGGATCCCCAACGGCGAAGCGTTCTGCCTGCAGTGCGTGGCCTCGTCC
TTCGACGCCGCGTGGACGGACGCCGGGCAGCGGCTCCTTCGCGCGCGCGGCCTCGACGCC
CCGCACCCCGCCGCCTGCATGCCGAGGGAGTTCGTCGAGTACATTGTCGGGACGCAGGAG
GACGGCCAGAGTCCGGCATTCGCCGGGGTAGTGGCGAACACGTCCCGCGCGATCGAGAGC
GAGTTCATCGACTTGGTAGCCGGGGACCCGCAGTACCGAGGGAAGAGGGTCTTCGCCGTC
GGGCCGATGAACCCACTGCTCGACGTGATGACCGCGCCGGCGGCAGCGGGACGCAGTGCG
CGGCACGAGTGCCTGGACTGGCTCGACAGGCAACCGCCGGCGTCGGTGCTGTACGTGTCG
TTCGGCACGACGACGTCGCTGCCGGCGGAGCAGATCGCGGAGCTCGCCGCGGCGCTGCGC
GACAGCAAGCAGCGGTTCGTCTGGGTTCTGCGCGACGCTGATCGCGGTGTGGTGCACGAG
GAGGAGGAGGAAGCCGCGGAGGAGAGTAGGCACGCCAGGTTCCTGTCCGAGTTCACCGAG
GAAACTCGAGGCATCGGGCTGGTGATCACCGGGTGGGCGCCGCAGCTGCAGATCCAGGCG
CACGGCGCCACGGCGGCGTTCATGAGCCACTGCGGCTGGAACTCGACCATGGAGAGCCTG
AGCCACGGGAATCCGATGCTCGCCTGGCCCATGCACTCCGACCAGCCGCTGGTGGCGGAG
CTCGTGTGCAAGTTCCTCAAGGCCGGGATCCTGGTGAGGCCATGGGAGCAACACGGCGCT
GTGACACCTGCGGATGCCATCCGCGAGGCGATCGAGAAGGTGATGGCACGCGACGAAGGT
TTGGCGCTGCGGGAGAGGGCCAAGGAGCTCATGGAGTCCATTCGCGCCTCCGTCGCTGAG
GGCGGGTCCTCGCGCAAGGACCTCGACGACTTCGTTGCATACATAGCAAGATGA

Peptide Sequence

PEP ID

OQU82110
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:6:52994972:52996405:-1 gene:SORBI_3006G174000 transcript:OQU82110 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MSMALPKSEMSVESVAVVAVPYPAQGHLNGMLHMSLLLASRGLPVHYAAPGPHVRQARAR
VHGWGDDALRRIEFHELEVPAYATPPPDPAAPSPFPTHLIPMGEAFVAGARAPVATLLAN
VSARHRRVVVLYDRLSSFAAPEAARIPNGEAFCLQCVASSFDAAWTDAGQRLLRARGLDA
PHPAACMPREFVEYIVGTQEDGQSPAFAGVVANTSRAIESEFIDLVAGDPQYRGKRVFAV
GPMNPLLDVMTAPAAAGRSARHECLDWLDRQPPASVLYVSFGTTTSLPAEQIAELAAALR
DSKQRFVWVLRDADRGVVHEEEEEAAEESRHARFLSEFTEETRGIGLVITGWAPQLQIQA
HGATAAFMSHCGWNSTMESLSHGNPMLAWPMHSDQPLVAELVCKFLKAGILVRPWEQHGA
VTPADAIREAIEKVMARDEGLALRERAKELMESIRASVAEGGSSRKDLDDFVAYIAR

Transcript Sequence

Transcript ID

OQU82110
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:6:52994972:52996405:-1 gene:SORBI_3006G174000 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGTCCATGGCTCTACCCAAATCCGAAATGTCCGTGGAATCCGTTGCCGTCGTGGCGGTG
CCGTACCCGGCGCAGGGCCACCTCAACGGCATGCTACACATGTCGCTGCTGCTCGCGTCC
CGGGGTCTCCCCGTGCACTACGCGGCGCCTGGGCCGCACGTCCGCCAGGCGCGCGCGCGC
GTGCACGGCTGGGGCGACGACGCCCTCCGCCGCATCGAGTTCCACGAGCTCGAGGTCCCC
GCGTACGCCACCCCGCCGCCGGACCCGGCCGCGCCCTCGCCGTTCCCGACCCACCTCATC
CCCATGGGCGAGGCCTTCGTCGCTGGCGCGCGCGCCCCGGTCGCCACCCTCCTCGCGAAT
GTCTCCGCGCGCCACCGCCGCGTGGTCGTCCTGTACGATCGCCTCAGCTCCTTCGCCGCG
CCCGAGGCGGCGCGGATCCCCAACGGCGAAGCGTTCTGCCTGCAGTGCGTGGCCTCGTCC
TTCGACGCCGCGTGGACGGACGCCGGGCAGCGGCTCCTTCGCGCGCGCGGCCTCGACGCC
CCGCACCCCGCCGCCTGCATGCCGAGGGAGTTCGTCGAGTACATTGTCGGGACGCAGGAG
GACGGCCAGAGTCCGGCATTCGCCGGGGTAGTGGCGAACACGTCCCGCGCGATCGAGAGC
GAGTTCATCGACTTGGTAGCCGGGGACCCGCAGTACCGAGGGAAGAGGGTCTTCGCCGTC
GGGCCGATGAACCCACTGCTCGACGTGATGACCGCGCCGGCGGCAGCGGGACGCAGTGCG
CGGCACGAGTGCCTGGACTGGCTCGACAGGCAACCGCCGGCGTCGGTGCTGTACGTGTCG
TTCGGCACGACGACGTCGCTGCCGGCGGAGCAGATCGCGGAGCTCGCCGCGGCGCTGCGC
GACAGCAAGCAGCGGTTCGTCTGGGTTCTGCGCGACGCTGATCGCGGTGTGGTGCACGAG
GAGGAGGAGGAAGCCGCGGAGGAGAGTAGGCACGCCAGGTTCCTGTCCGAGTTCACCGAG
GAAACTCGAGGCATCGGGCTGGTGATCACCGGGTGGGCGCCGCAGCTGCAGATCCAGGCG
CACGGCGCCACGGCGGCGTTCATGAGCCACTGCGGCTGGAACTCGACCATGGAGAGCCTG
AGCCACGGGAATCCGATGCTCGCCTGGCCCATGCACTCCGACCAGCCGCTGGTGGCGGAG
CTCGTGTGCAAGTTCCTCAAGGCCGGGATCCTGGTGAGGCCATGGGAGCAACACGGCGCT
GTGACACCTGCGGATGCCATCCGCGAGGCGATCGAGAAGGTGATGGCACGCGACGAAGGT
TTGGCGCTGCGGGAGAGGGCCAAGGAGCTCATGGAGTCCATTCGCGCCTCCGTCGCTGAG
GGCGGGTCCTCGCGCAAGGACCTCGACGACTTCGTTGCATACATAGCAAGATGA