Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

OQU81963
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:6:50722697:50726722:-1 gene:SORBI_3006G145500 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGCTTGATTTGTTGCCTGTGTTGGTCTTCGCTATCGCTATTAATAAAAAATCAGGAAAG
ATTGTGGATGGAAGCAATGGCGACGTGGCTGCTGATCATTATCATCGATACAAGGAGGAC
ATAGAAATGATGCATTCGGTTGGCCTCGACTCCTACAGATTCTCATTGTCCTGGTCGAGA
ATACTTCCAAAGGGTCGCTTCGGAGATGTTAATCCGGCAGGCGTTAAATTCTACAATAGT
CTCATCAACGGCATGCTACAAAAAGGGATAGAACCATTTGTGACGATCAATCACTATGAC
ATACCCGAGGAACTCCAACAAAGATACGGTTCCTGGTTGAGCCCAGAGATTCAGGAGGAC
TTCACCTACTTTGCTGAGATATGCTTCAAGATGTTTGGTGACCGAGTAAAGCATTGGGCT
ACATTCAATGAGCCAAACCTTATGGCAAAGCTCGCGTACTTCAACGGCAAATTTCCACCA
AGCCACTGTTCCAAGCCATTTGGGAAATGCAATTCTGGGAATTCATCAACTGAGCCCTAC
ATTGCAGCGCATAACATGATACTAGCTCATGCAAAGACGGTCAATATCTACAAAAAGAAT
TACAAGACCAAGCAAGGTGGCTCTGTTGGAATTACAGTATATATGAGATGGTATGAACCA
CTGAGGAATATCACAGACGACCACTTGGCAGTAAGCCGAGCTCAGTCTTTCGAAGCTCCA
TGGTTCCTGGATCCCTTGTTCTTTGGTGACTATCCTCACCAAATGCGCCAAATCTTAGGT
CCAAACTTGCCGGAATTCACAGAAGGAGAGAAGCAACTAATGAAAAACCAAATTGACTTC
ATCGGAGTAAATCACTACAAAACATTATACGTCAAGGATTGCGTATATTCTCTATGTGAC
TTGGACACCTATGCTGGTGATGCTTTAGTTTCTGAATCAGCAGAACGAAATGGGATACCC
ATTGGAAAGCCGACACCGGTTGCAAACAACTATGTGGTTCCAAGCTCTATGGAGAAGCTG
GTCATGTATTTAACGCAGAGATATAAAAGCATACCTTTGTACATCACAGAGAATGGTTAT
GCCCAAATAGGCAATAGCAGTACCACAACAGAAGAATTAATTAATGATACTGAAAGATCA
AGTTACATTCGTGACTACCTCACTTACTTGAGCTTTGCAATAAGGAAAGGAGCAGATGTG
AGAGGTTATTTCGTGTGGTCTTTGATGGATAACTTCGAATGGCTCTCTGGTTACACCATA
AAGTACGGTCTTTATCATGTGGATTTCAAGTCACTAAAGCGAACACCAAAATTGTCTGCT
AAATGGTACAGCAATTTTATCAAGGGCTATGAACAGATAGAGATGGCCTCTGAAGAATCA
CCTAAGCATATGGTTTCCTAG

Peptide Sequence

PEP ID

OQU81963
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:6:50722697:50726722:-1 gene:SORBI_3006G145500 transcript:OQU81963 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MLDLLPVLVFAIAINKKSGKIVDGSNGDVAADHYHRYKEDIEMMHSVGLDSYRFSLSWSR
ILPKGRFGDVNPAGVKFYNSLINGMLQKGIEPFVTINHYDIPEELQQRYGSWLSPEIQED
FTYFAEICFKMFGDRVKHWATFNEPNLMAKLAYFNGKFPPSHCSKPFGKCNSGNSSTEPY
IAAHNMILAHAKTVNIYKKNYKTKQGGSVGITVYMRWYEPLRNITDDHLAVSRAQSFEAP
WFLDPLFFGDYPHQMRQILGPNLPEFTEGEKQLMKNQIDFIGVNHYKTLYVKDCVYSLCD
LDTYAGDALVSESAERNGIPIGKPTPVANNYVVPSSMEKLVMYLTQRYKSIPLYITENGY
AQIGNSSTTTEELINDTERSSYIRDYLTYLSFAIRKGADVRGYFVWSLMDNFEWLSGYTI
KYGLYHVDFKSLKRTPKLSAKWYSNFIKGYEQIEMASEESPKHMVS

Transcript Sequence

Transcript ID

OQU81963
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:6:50722697:50726722:-1 gene:SORBI_3006G145500 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

CAGGCATGGGGACTGAGAATTGCTGCGAGGTCTAGACAGGCTGCCCGCCGTCATGGCGCG
TCTCTTCTTCTTCGTCCTCCTCTATCCCCTCCTCTGCCCCTCCATCACCGGGCTCAGGCG
CAGCGACTTCCCGCCGTCCTTCCTCTTCGGCGCCGGCACGTCGTCTTACCAGGTACGGGC
CGTACGGCAGCCGTTGCCAAGCTCAGTAAGCTAGCTCTAAACGCACGCGTGCACGTAGTC
TGCAACTCTGCGTAGTTTATTGACTAGATTGAGCTGCGTGCCGCCATCATTTTTTCATTA
TAATTTGCAAATGCATGGGAGGTGAAGCCAGGTTCCTTGGACGGGCTAGTTGCTCTGCTA
TATATGGCTGTGTGTCTCATTCTCCTTCTGCAGTTTCCCATTTTACTATAATGGAAACCT
TCAATTTTTGTTTTGCTTATCTAGTCATACCTGTACTGTCTGATGATATAGTATGTTAGT
TGGATACTTTTCTCCTCTGCTGTTTTCCCATTTAATTTCTTCTTGTGACTATCTTCTAAT
TCTAGATTGAAGGCGCCTACCGAGAAGACAACAAGGGTCTGAGCAATTGGGATGTCTTCA
CCCATATTCAAGGTGCTTCCATAGATCTCAGTTACTATGTATATGATGAGCAACCCAATA
ATAAGAAGTATAAGCAAACTATGGCCACCTTAAGTGGAATTAGCCACTATTATATAGTTA
ATGACATTCTAGAACAAGCGATTCTTGGGGGTATTTAATATTTTCAATAATGCTTTTGTT
GAAATTTCTTGGAGATGTGTCCATTTAGGACGTTATTATATTGCACACTGCACTTTCCTC
TTACAGGTTTTTATCTCAGTTAGAGGATCATTTCACGCTCTTGAATCAGAGGAGGAAGTG
AACATTTTTGGCCAATGAATGCATCTTCTGTTTAGAATTGGGAGGGGCTTAGCCGCTTAG
GAAATAAGGGCCACAGAACGTGGCTCCGCTTACGCCACGTCGATTTGGGAAGGTAATGAG
AAGCTGTCCAGATGAGGCGACACTCGCAGAGGATGATAGTGACGCCAACCCAATAGCCAG
CTAGGACAATTTTCTGCACGTGCCTGCCCAGCTATAAACATGTGCTCTTAGCCGCTTAGG
CTGTGTGGATCCTAGCTAGTTATGCATAGGCCATGGTTTAAAATCCTTGTGTCAACTCAA
TTTAATGAACTTGAAATTATTAAGCTTTTCTTATCGAAAAACAAATAAAAAAGTGCACTT
TGAAAATCACATACATGCTTGATTTGTTGCCTGTGTTGGTCTTCGCTATCGCTATTAATA
AAAAATCAGGAAAGATTGTGGATGGAAGCAATGGCGACGTGGCTGCTGATCATTATCATC
GATACAAGGAGGACATAGAAATGATGCATTCGGTTGGCCTCGACTCCTACAGATTCTCAT
TGTCCTGGTCGAGAATACTTCCAAAGGGTCGCTTCGGAGATGTTAATCCGGCAGGCGTTA
AATTCTACAATAGTCTCATCAACGGCATGCTACAAAAAGGGATAGAACCATTTGTGACGA
TCAATCACTATGACATACCCGAGGAACTCCAACAAAGATACGGTTCCTGGTTGAGCCCAG
AGATTCAGGAGGACTTCACCTACTTTGCTGAGATATGCTTCAAGATGTTTGGTGACCGAG
TAAAGCATTGGGCTACATTCAATGAGCCAAACCTTATGGCAAAGCTCGCGTACTTCAACG
GCAAATTTCCACCAAGCCACTGTTCCAAGCCATTTGGGAAATGCAATTCTGGGAATTCAT
CAACTGAGCCCTACATTGCAGCGCATAACATGATACTAGCTCATGCAAAGACGGTCAATA
TCTACAAAAAGAATTACAAGACCAAGCAAGGTGGCTCTGTTGGAATTACAGTATATATGA
GATGGTATGAACCACTGAGGAATATCACAGACGACCACTTGGCAGTAAGCCGAGCTCAGT
CTTTCGAAGCTCCATGGTTCCTGGATCCCTTGTTCTTTGGTGACTATCCTCACCAAATGC
GCCAAATCTTAGGTCCAAACTTGCCGGAATTCACAGAAGGAGAGAAGCAACTAATGAAAA
ACCAAATTGACTTCATCGGAGTAAATCACTACAAAACATTATACGTCAAGGATTGCGTAT
ATTCTCTATGTGACTTGGACACCTATGCTGGTGATGCTTTAGTTTCTGAATCAGCAGAAC
GAAATGGGATACCCATTGGAAAGCCGACACCGGTTGCAAACAACTATGTGGTTCCAAGCT
CTATGGAGAAGCTGGTCATGTATTTAACGCAGAGATATAAAAGCATACCTTTGTACATCA
CAGAGAATGGTTATGCCCAAATAGGCAATAGCAGTACCACAACAGAAGAATTAATTAATG
ATACTGAAAGATCAAGTTACATTCGTGACTACCTCACTTACTTGAGCTTTGCAATAAGGA
AAGGAGCAGATGTGAGAGGTTATTTCGTGTGGTCTTTGATGGATAACTTCGAATGGCTCT
CTGGTTACACCATAAAGTACGGTCTTTATCATGTGGATTTCAAGTCACTAAAGCGAACAC
CAAAATTGTCTGCTAAATGGTACAGCAATTTTATCAAGGGCTATGAACAGATAGAGATGG
CCTCTGAAGAATCACCTAAGCATATGGTTTCCTAGCACAGATATACAGAATTCTCAAGGT
CCGTATATGTACAATACTCAATGATTTGATAAAGATGTTTACACAGGAAATTATTTGGTA
AATTTCC